Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 RNU5D-1-201ENST00000363299 116 ntBASIC2.76□□□□□ -1.97
RFX4Q33E94 SNORA7.4-201ENST00000384249 137 ntBASIC2.76□□□□□ -1.97
RFX4Q33E94 MIR183-201ENST00000384958 110 ntBASIC2.76□□□□□ -1.97
RFX4Q33E94 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
RFX4Q33E94 SNORA48.7-201ENST00000391302 135 ntBASIC2.76□□□□□ -1.97
RFX4Q33E94 RN7SKP27-201ENST00000410684 333 ntBASIC2.76□□□□□ -1.97
RFX4Q33E94 RNU2-42P-201ENST00000410697 113 ntBASIC2.76□□□□□ -1.97
RFX4Q33E94 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.76□□□□□ -1.97
RFX4Q33E94 RAD23BP2-201ENST00000416003 1207 ntBASIC2.76□□□□□ -1.97
RFX4Q33E94 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.76□□□□□ -1.97
RFX4Q33E94 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.76□□□□□ -1.97
RFX4Q33E94 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.76□□□□□ -1.97
RFX4Q33E94 AC007435.1-201ENST00000421086 415 ntBASIC2.76□□□□□ -1.97
RFX4Q33E94 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
RFX4Q33E94 MTATP6P4-201ENST00000427725 675 ntBASIC2.76□□□□□ -1.97
RFX4Q33E94 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.76□□□□□ -1.97
RFX4Q33E94 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.76□□□□□ -1.97
RFX4Q33E94 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.76□□□□□ -1.97
RFX4Q33E94 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.76□□□□□ -1.97
RFX4Q33E94 NANOGP2-201ENST00000435391 727 ntBASIC2.76□□□□□ -1.97
RFX4Q33E94 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.76□□□□□ -1.97
RFX4Q33E94 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.76□□□□□ -1.97
RFX4Q33E94 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
RFX4Q33E94 VN1R34P-201ENST00000447387 883 ntBASIC2.76□□□□□ -1.97
RFX4Q33E94 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.76□□□□□ -1.97
RFX4Q33E94 snoU13.4-201ENST00000458916 104 ntBASIC2.76□□□□□ -1.97
RFX4Q33E94 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC2.76□□□□□ -1.97
RFX4Q33E94 AC069528.1-202ENST00000482888 637 ntBASIC2.76□□□□□ -1.97
RFX4Q33E94 RPL21P129-201ENST00000491732 478 ntBASIC2.76□□□□□ -1.97
RFX4Q33E94 OR4G11P-201ENST00000492842 939 ntBASIC2.76□□□□□ -1.97
RFX4Q33E94 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.76□□□□□ -1.97
RFX4Q33E94 MTCYBP16-201ENST00000509187 1129 ntBASIC2.76□□□□□ -1.97
RFX4Q33E94 AC105914.1-201ENST00000511798 226 ntBASIC2.76□□□□□ -1.97
RFX4Q33E94 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.76□□□□□ -1.97
RFX4Q33E94 RNU6-826P-201ENST00000516827 104 ntBASIC2.76□□□□□ -1.97
RFX4Q33E94 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.76□□□□□ -1.97
RFX4Q33E94 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.76□□□□□ -1.97
RFX4Q33E94 AP001189.2-201ENST00000527320 189 ntBASIC2.76□□□□□ -1.97
RFX4Q33E94 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.76□□□□□ -1.97
RFX4Q33E94 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.76□□□□□ -1.97
RFX4Q33E94 AC008127.2-201ENST00000549925 1075 ntBASIC2.76□□□□□ -1.97
RFX4Q33E94 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.76□□□□□ -1.97
RFX4Q33E94 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.76□□□□□ -1.97
RFX4Q33E94 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.76□□□□□ -1.97
RFX4Q33E94 AC069545.1-201ENST00000605671 358 ntBASIC2.76□□□□□ -1.97
RFX4Q33E94 AC008962.1-201ENST00000605729 304 ntBASIC2.76□□□□□ -1.97
RFX4Q33E94 AL359198.2-201ENST00000611836 194 ntBASIC2.76□□□□□ -1.97
RFX4Q33E94 AL138478.1-201ENST00000612252 832 ntBASIC2.76□□□□□ -1.97
RFX4Q33E94 AC231759.1-201ENST00000616455 597 ntBASIC2.76□□□□□ -1.97
RFX4Q33E94 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.76□□□□□ -1.97
RFX4Q33E94 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
RFX4Q33E94 AC099506.2-201ENST00000623074 221 ntBASIC2.76□□□□□ -1.97
RFX4Q33E94 AC018692.3-201ENST00000623929 123 ntBASIC2.76□□□□□ -1.97
RFX4Q33E94 AC090617.7-201ENST00000623952 126 ntBASIC2.76□□□□□ -1.97
RFX4Q33E94 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.76□□□□□ -1.97
RFX4Q33E94 U6.105-201ENST00000637379 88 ntBASIC2.76□□□□□ -1.97
RFX4Q33E94 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
RFX4Q33E94 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.76□□□□□ -1.97
RFX4Q33E94 NUP58P1-201ENST00000502546 1738 ntBASIC2.76□□□□□ -1.97
RFX4Q33E94 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.76□□□□□ -1.97
RFX4Q33E94 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
RFX4Q33E94 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
RFX4Q33E94 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
RFX4Q33E94 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
RFX4Q33E94 Z82195.2-201ENST00000612348 18351 ntBASIC2.75□□□□□ -1.97
RFX4Q33E94 MTCO1P23-201ENST00000415223 1526 ntBASIC2.75□□□□□ -1.97
RFX4Q33E94 RNU1-35P-201ENST00000362782 153 ntBASIC2.75□□□□□ -1.97
RFX4Q33E94 SNORA14A-201ENST00000364773 135 ntBASIC2.75□□□□□ -1.97
RFX4Q33E94 RNU6-821P-201ENST00000390995 107 ntBASIC2.75□□□□□ -1.97
RFX4Q33E94 RNU4-47P-201ENST00000410876 114 ntBASIC2.75□□□□□ -1.97
RFX4Q33E94 VN1R51P-201ENST00000411675 945 ntBASIC2.75□□□□□ -1.97
RFX4Q33E94 UBE2D3P2-201ENST00000424409 445 ntBASIC2.75□□□□□ -1.97
RFX4Q33E94 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.75□□□□□ -1.97
RFX4Q33E94 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.75□□□□□ -1.97
RFX4Q33E94 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.75□□□□□ -1.97
RFX4Q33E94 OR10R1P-201ENST00000441524 1141 ntBASIC2.75□□□□□ -1.97
RFX4Q33E94 Z75741.1-201ENST00000446793 314 ntBASIC2.75□□□□□ -1.97
RFX4Q33E94 AC016696.1-201ENST00000446949 318 ntBASIC2.75□□□□□ -1.97
RFX4Q33E94 VN1R10P-201ENST00000447106 875 ntBASIC2.75□□□□□ -1.97
RFX4Q33E94 EXOSC3P1-201ENST00000448649 500 ntBASIC2.75□□□□□ -1.97
RFX4Q33E94 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.75□□□□□ -1.97
RFX4Q33E94 RN7SL863P-201ENST00000462370 296 ntBASIC2.75□□□□□ -1.97
RFX4Q33E94 AC092757.1-201ENST00000467293 467 ntBASIC2.75□□□□□ -1.97
RFX4Q33E94 RPS23P3-201ENST00000470993 430 ntBASIC2.75□□□□□ -1.97
RFX4Q33E94 AC109925.1-201ENST00000478069 331 ntBASIC2.75□□□□□ -1.97
RFX4Q33E94 AC119751.4-201ENST00000507498 357 ntBASIC2.75□□□□□ -1.97
RFX4Q33E94 AC004062.1-201ENST00000509926 645 ntBASIC2.75□□□□□ -1.97
RFX4Q33E94 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.75□□□□□ -1.97
RFX4Q33E94 MTATP6P9-201ENST00000515039 680 ntBASIC2.75□□□□□ -1.97
RFX4Q33E94 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.75□□□□□ -1.97
RFX4Q33E94 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.75□□□□□ -1.97
RFX4Q33E94 AC125611.1-201ENST00000549563 229 ntBASIC2.75□□□□□ -1.97
RFX4Q33E94 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC2.75□□□□□ -1.97
RFX4Q33E94 SETP2-201ENST00000553886 926 ntBASIC2.75□□□□□ -1.97
RFX4Q33E94 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.75□□□□□ -1.97
RFX4Q33E94 AC087481.2-201ENST00000565492 330 ntBASIC2.75□□□□□ -1.97
RFX4Q33E94 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.75□□□□□ -1.97
RFX4Q33E94 MIR1254-2-201ENST00000579553 63 ntBASIC2.75□□□□□ -1.97
RFX4Q33E94 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.75□□□□□ -1.97
RFX4Q33E94 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms