Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AC119751.7-201ENST00000600494 245 ntBASIC3.97□□□□□ -1.77
HDAC4P56524 AC008121.2-201ENST00000614647 523 ntBASIC3.97□□□□□ -1.77
HDAC4P56524 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.97□□□□□ -1.77
HDAC4P56524 AL445264.1-201ENST00000621719 171 ntBASIC3.97□□□□□ -1.77
HDAC4P56524 AL354798.1-201ENST00000622505 329 ntBASIC3.97□□□□□ -1.77
HDAC4P56524 AC112200.1-201ENST00000625015 234 ntBASIC3.97□□□□□ -1.77
HDAC4P56524 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HDAC4P56524 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.97□□□□□ -1.77
HDAC4P56524 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.97□□□□□ -1.77
HDAC4P56524 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HDAC4P56524 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.97□□□□□ -1.77
HDAC4P56524 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HDAC4P56524 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HDAC4P56524 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.96□□□□□ -1.78
HDAC4P56524 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
HDAC4P56524 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
HDAC4P56524 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HDAC4P56524 Y_RNA.97-201ENST00000363094 102 ntBASIC3.96□□□□□ -1.78
HDAC4P56524 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
HDAC4P56524 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.96□□□□□ -1.78
HDAC4P56524 SNORD116-4-201ENST00000384733 96 ntBASIC3.96□□□□□ -1.78
HDAC4P56524 MIR200C-201ENST00000384980 68 ntBASIC3.96□□□□□ -1.78
HDAC4P56524 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
HDAC4P56524 U3.29-201ENST00000391296 212 ntBASIC3.96□□□□□ -1.78
HDAC4P56524 SOD2P1-201ENST00000396543 562 ntBASIC3.96□□□□□ -1.78
HDAC4P56524 RN7SKP159-201ENST00000410657 292 ntBASIC3.96□□□□□ -1.78
HDAC4P56524 CRYBB2P1-203ENST00000415709 538 ntBASIC3.96□□□□□ -1.78
HDAC4P56524 AIMP1P1-201ENST00000418670 937 ntBASIC3.96□□□□□ -1.78
HDAC4P56524 AL445669.1-201ENST00000426743 755 ntBASIC3.96□□□□□ -1.78
HDAC4P56524 AC006548.1-201ENST00000427470 102 ntBASIC3.96□□□□□ -1.78
HDAC4P56524 AL365184.2-201ENST00000431139 435 ntBASIC3.96□□□□□ -1.78
HDAC4P56524 MRPS18BP2-201ENST00000434310 759 ntBASIC3.96□□□□□ -1.78
HDAC4P56524 AC007389.2-201ENST00000434630 306 ntBASIC3.96□□□□□ -1.78
HDAC4P56524 AL353706.1-201ENST00000436728 494 ntBASIC3.96□□□□□ -1.78
HDAC4P56524 AL831737.1-201ENST00000441288 271 ntBASIC3.96□□□□□ -1.78
HDAC4P56524 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.96□□□□□ -1.78
HDAC4P56524 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.96□□□□□ -1.78
HDAC4P56524 RN7SL93P-201ENST00000463035 293 ntBASIC3.96□□□□□ -1.78
HDAC4P56524 SNRPGP3-201ENST00000469405 227 ntBASIC3.96□□□□□ -1.78
HDAC4P56524 AC017015.1-201ENST00000477387 286 ntBASIC3.96□□□□□ -1.78
HDAC4P56524 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.96□□□□□ -1.78
HDAC4P56524 AC004069.2-201ENST00000505438 1114 ntBASIC3.96□□□□□ -1.78
HDAC4P56524 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.96□□□□□ -1.78
HDAC4P56524 AC010625.1-201ENST00000511296 403 ntBASIC3.96□□□□□ -1.78
HDAC4P56524 MTND5P4-201ENST00000514978 288 ntBASIC3.96□□□□□ -1.78
HDAC4P56524 AC022447.1-201ENST00000515358 464 ntBASIC3.96□□□□□ -1.78
HDAC4P56524 Y_RNA.655-201ENST00000515919 96 ntBASIC3.96□□□□□ -1.78
HDAC4P56524 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.96□□□□□ -1.78
HDAC4P56524 AC022695.1-201ENST00000522089 237 ntBASIC3.96□□□□□ -1.78
HDAC4P56524 AC068587.4-201ENST00000533893 186 ntBASIC3.96□□□□□ -1.78
HDAC4P56524 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.96□□□□□ -1.78
HDAC4P56524 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.96□□□□□ -1.78
HDAC4P56524 AC024909.2-201ENST00000553035 286 ntBASIC3.96□□□□□ -1.78
HDAC4P56524 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.96□□□□□ -1.78
HDAC4P56524 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.96□□□□□ -1.78
HDAC4P56524 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.96□□□□□ -1.78
HDAC4P56524 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.96□□□□□ -1.78
HDAC4P56524 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.96□□□□□ -1.78
HDAC4P56524 AP001004.1-201ENST00000582468 324 ntBASIC3.96□□□□□ -1.78
HDAC4P56524 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.96□□□□□ -1.78
HDAC4P56524 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HDAC4P56524 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.96□□□□□ -1.78
HDAC4P56524 AC073544.2-201ENST00000601155 540 ntBASIC3.96□□□□□ -1.78
HDAC4P56524 U73023.1-201ENST00000603134 700 ntBASIC3.96□□□□□ -1.78
HDAC4P56524 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.96□□□□□ -1.78
HDAC4P56524 AC090186.1-201ENST00000605991 572 ntBASIC3.96□□□□□ -1.78
HDAC4P56524 SNORA62.6-201ENST00000606322 83 ntBASIC3.96□□□□□ -1.78
HDAC4P56524 RN7SKP299-201ENST00000606679 301 ntBASIC3.96□□□□□ -1.78
HDAC4P56524 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
HDAC4P56524 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.96□□□□□ -1.78
HDAC4P56524 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.96□□□□□ -1.78
HDAC4P56524 CR381572.1-201ENST00000625098 102 ntBASIC3.96□□□□□ -1.78
HDAC4P56524 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.96□□□□□ -1.78
HDAC4P56524 AC244205.2-202ENST00000635781 342 ntBASIC3.96□□□□□ -1.78
HDAC4P56524 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.96□□□□□ -1.78
HDAC4P56524 AL133383.2-201ENST00000622958 2336 ntBASIC3.96□□□□□ -1.78
HDAC4P56524 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.96□□□□□ -1.78
HDAC4P56524 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HDAC4P56524 AL161912.2-201ENST00000565707 3007 ntBASIC3.96□□□□□ -1.78
HDAC4P56524 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HDAC4P56524 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HDAC4P56524 RNU6-600P-201ENST00000362524 99 ntBASIC3.95□□□□□ -1.78
HDAC4P56524 RNU6-289P-201ENST00000364093 107 ntBASIC3.95□□□□□ -1.78
HDAC4P56524 SNORA51.2-201ENST00000364595 132 ntBASIC3.95□□□□□ -1.78
HDAC4P56524 RNU6-1181P-201ENST00000384191 106 ntBASIC3.95□□□□□ -1.78
HDAC4P56524 MIR30B-201ENST00000384850 88 ntBASIC3.95□□□□□ -1.78
HDAC4P56524 AL583834.1-201ENST00000406943 343 ntBASIC3.95□□□□□ -1.78
HDAC4P56524 SNORA3.3-201ENST00000408712 125 ntBASIC3.95□□□□□ -1.78
HDAC4P56524 RNU2-15P-201ENST00000410692 191 ntBASIC3.95□□□□□ -1.78
HDAC4P56524 AC007390.1-201ENST00000415722 356 ntBASIC3.95□□□□□ -1.78
HDAC4P56524 RPL7P2-201ENST00000427639 268 ntBASIC3.95□□□□□ -1.78
HDAC4P56524 AL590233.1-201ENST00000430017 456 ntBASIC3.95□□□□□ -1.78
HDAC4P56524 MUPP-201ENST00000438111 566 ntBASIC3.95□□□□□ -1.78
HDAC4P56524 LSM1P1-201ENST00000438629 273 ntBASIC3.95□□□□□ -1.78
HDAC4P56524 RPS29P7-201ENST00000439662 171 ntBASIC3.95□□□□□ -1.78
HDAC4P56524 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.95□□□□□ -1.78
HDAC4P56524 MTCO1P19-201ENST00000443487 500 ntBASIC3.95□□□□□ -1.78
HDAC4P56524 AC002381.1-201ENST00000447049 280 ntBASIC3.95□□□□□ -1.78
HDAC4P56524 AC098824.1-201ENST00000453565 980 ntBASIC3.95□□□□□ -1.78
HDAC4P56524 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms