Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 AC019227.1-201ENST00000526902 510 ntBASIC3.05□□□□□ -1.92
ACLYP53396 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
ACLYP53396 AC126177.3-201ENST00000551839 688 ntBASIC3.05□□□□□ -1.92
ACLYP53396 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.05□□□□□ -1.92
ACLYP53396 SNORD53-201ENST00000579969 78 ntBASIC3.05□□□□□ -1.92
ACLYP53396 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.05□□□□□ -1.92
ACLYP53396 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
ACLYP53396 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
ACLYP53396 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.05□□□□□ -1.92
ACLYP53396 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
ACLYP53396 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.04□□□□□ -1.92
ACLYP53396 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
ACLYP53396 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.04□□□□□ -1.92
ACLYP53396 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.04□□□□□ -1.92
ACLYP53396 U6.112-201ENST00000384129 70 ntBASIC3.04□□□□□ -1.92
ACLYP53396 RNU6-549P-201ENST00000384433 107 ntBASIC3.04□□□□□ -1.92
ACLYP53396 SNORD116-23-201ENST00000384645 92 ntBASIC3.04□□□□□ -1.92
ACLYP53396 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.04□□□□□ -1.92
ACLYP53396 AL139039.1-201ENST00000401900 692 ntBASIC3.04□□□□□ -1.92
ACLYP53396 AL356057.3-201ENST00000402607 340 ntBASIC3.04□□□□□ -1.92
ACLYP53396 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.04□□□□□ -1.92
ACLYP53396 FCF1P2-201ENST00000415284 583 ntBASIC3.04□□□□□ -1.92
ACLYP53396 SFR1P2-201ENST00000421841 730 ntBASIC3.04□□□□□ -1.92
ACLYP53396 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.04□□□□□ -1.92
ACLYP53396 RPL31P54-201ENST00000429803 370 ntBASIC3.04□□□□□ -1.92
ACLYP53396 AC005345.1-201ENST00000431868 217 ntBASIC3.04□□□□□ -1.92
ACLYP53396 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.04□□□□□ -1.92
ACLYP53396 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC3.04□□□□□ -1.92
ACLYP53396 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
ACLYP53396 RN7SL283P-201ENST00000489055 303 ntBASIC3.04□□□□□ -1.92
ACLYP53396 RNU6-885P-201ENST00000516607 104 ntBASIC3.04□□□□□ -1.92
ACLYP53396 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.04□□□□□ -1.92
ACLYP53396 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC3.04□□□□□ -1.92
ACLYP53396 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.04□□□□□ -1.92
ACLYP53396 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
ACLYP53396 HPRT1P3-201ENST00000539521 576 ntBASIC3.04□□□□□ -1.92
ACLYP53396 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.04□□□□□ -1.92
ACLYP53396 AP001029.3-201ENST00000588063 596 ntBASIC3.04□□□□□ -1.92
ACLYP53396 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.04□□□□□ -1.92
ACLYP53396 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.04□□□□□ -1.92
ACLYP53396 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.04□□□□□ -1.92
ACLYP53396 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.04□□□□□ -1.92
ACLYP53396 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.04□□□□□ -1.92
ACLYP53396 AC092593.1-201ENST00000515413 1815 ntBASIC3.04□□□□□ -1.92
ACLYP53396 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.04□□□□□ -1.92
ACLYP53396 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.04□□□□□ -1.92
ACLYP53396 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
ACLYP53396 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.03□□□□□ -1.92
ACLYP53396 ASNSP3-201ENST00000451989 1306 ntBASIC3.03□□□□□ -1.92
ACLYP53396 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.03□□□□□ -1.92
ACLYP53396 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
ACLYP53396 RNU6-582P-201ENST00000362989 107 ntBASIC3.03□□□□□ -1.92
ACLYP53396 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.03□□□□□ -1.92
ACLYP53396 MIR512-1-201ENST00000384913 84 ntBASIC3.03□□□□□ -1.92
ACLYP53396 AL024474.1-201ENST00000404655 591 ntBASIC3.03□□□□□ -1.92
ACLYP53396 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.03□□□□□ -1.92
ACLYP53396 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.03□□□□□ -1.92
ACLYP53396 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.03□□□□□ -1.92
ACLYP53396 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.03□□□□□ -1.92
ACLYP53396 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.03□□□□□ -1.92
ACLYP53396 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.03□□□□□ -1.92
ACLYP53396 RPL17P49-201ENST00000443728 411 ntBASIC3.03□□□□□ -1.92
ACLYP53396 MTND2P19-201ENST00000449129 1012 ntBASIC3.03□□□□□ -1.92
ACLYP53396 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.03□□□□□ -1.92
ACLYP53396 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.03□□□□□ -1.92
ACLYP53396 AC104308.1-201ENST00000454621 333 ntBASIC3.03□□□□□ -1.92
ACLYP53396 PTGES3P5-201ENST00000455109 434 ntBASIC3.03□□□□□ -1.92
ACLYP53396 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.03□□□□□ -1.92
ACLYP53396 RPS23P3-201ENST00000470993 430 ntBASIC3.03□□□□□ -1.92
ACLYP53396 MTCO2P9-201ENST00000503214 694 ntBASIC3.03□□□□□ -1.92
ACLYP53396 AC093767.1-201ENST00000504523 156 ntBASIC3.03□□□□□ -1.92
ACLYP53396 AC008549.1-201ENST00000512900 643 ntBASIC3.03□□□□□ -1.92
ACLYP53396 AP003102.1-201ENST00000525638 661 ntBASIC3.03□□□□□ -1.92
ACLYP53396 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.03□□□□□ -1.92
ACLYP53396 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.03□□□□□ -1.92
ACLYP53396 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.03□□□□□ -1.92
ACLYP53396 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.03□□□□□ -1.92
ACLYP53396 SNORD84-203ENST00000584275 78 ntBASIC3.03□□□□□ -1.92
ACLYP53396 AC095031.1-201ENST00000623685 672 ntBASIC3.03□□□□□ -1.92
ACLYP53396 ZNF663P-202ENST00000641770 1131 ntBASIC3.03□□□□□ -1.92
ACLYP53396 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
ACLYP53396 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.03□□□□□ -1.92
ACLYP53396 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
ACLYP53396 NUP58P1-201ENST00000502546 1738 ntBASIC3.02□□□□□ -1.93
ACLYP53396 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
ACLYP53396 RNU1-35P-201ENST00000362782 153 ntBASIC3.02□□□□□ -1.93
ACLYP53396 RNU6-251P-201ENST00000363235 104 ntBASIC3.02□□□□□ -1.93
ACLYP53396 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.02□□□□□ -1.93
ACLYP53396 U3.29-201ENST00000391296 212 ntBASIC3.02□□□□□ -1.93
ACLYP53396 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.02□□□□□ -1.93
ACLYP53396 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.02□□□□□ -1.93
ACLYP53396 AC245054.2-201ENST00000415639 319 ntBASIC3.02□□□□□ -1.93
ACLYP53396 SDCBPP3-201ENST00000419629 891 ntBASIC3.02□□□□□ -1.93
ACLYP53396 AC099677.1-201ENST00000420575 175 ntBASIC3.02□□□□□ -1.93
ACLYP53396 AC079780.1-201ENST00000428259 207 ntBASIC3.02□□□□□ -1.93
ACLYP53396 AC009969.1-201ENST00000438726 172 ntBASIC3.02□□□□□ -1.93
ACLYP53396 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.02□□□□□ -1.93
ACLYP53396 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.02□□□□□ -1.93
ACLYP53396 UBL5P3-201ENST00000475112 231 ntBASIC3.02□□□□□ -1.93
ACLYP53396 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms