Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 AC099654.7-201ENST00000635788 2127 ntBASIC6.7□□□□□ -1.34
NUBP1P53384 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC6.7□□□□□ -1.34
NUBP1P53384 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
NUBP1P53384 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
NUBP1P53384 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.69□□□□□ -1.34
NUBP1P53384 HYDIN2-203ENST00000614586 13885 ntBASIC6.69□□□□□ -1.34
NUBP1P53384 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC6.69□□□□□ -1.34
NUBP1P53384 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
NUBP1P53384 AC026951.1-201ENST00000559530 2459 ntBASIC6.69□□□□□ -1.34
NUBP1P53384 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NUBP1P53384 TMC3-AS1-206ENST00000612811 2726 ntBASIC6.69□□□□□ -1.34
NUBP1P53384 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NUBP1P53384 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.69□□□□□ -1.34
NUBP1P53384 MIR616-201ENST00000385293 97 ntBASIC6.69□□□□□ -1.34
NUBP1P53384 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
NUBP1P53384 AL512633.1-201ENST00000399931 655 ntBASIC6.69□□□□□ -1.34
NUBP1P53384 MIR1178-201ENST00000408396 91 ntBASIC6.69□□□□□ -1.34
NUBP1P53384 RNA5SP31-201ENST00000411144 127 ntBASIC6.69□□□□□ -1.34
NUBP1P53384 SDHDP6-201ENST00000414693 480 ntBASIC6.69□□□□□ -1.34
NUBP1P53384 AL663061.1-201ENST00000416625 580 ntBASIC6.69□□□□□ -1.34
NUBP1P53384 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC6.69□□□□□ -1.34
NUBP1P53384 CYP4F29P-201ENST00000420685 446 ntBASIC6.69□□□□□ -1.34
NUBP1P53384 AC063976.4-201ENST00000421971 163 ntBASIC6.69□□□□□ -1.34
NUBP1P53384 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC6.69□□□□□ -1.34
NUBP1P53384 GEMIN8P3-201ENST00000445417 720 ntBASIC6.69□□□□□ -1.34
NUBP1P53384 EIF4A1P11-201ENST00000451239 222 ntBASIC6.69□□□□□ -1.34
NUBP1P53384 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC6.69□□□□□ -1.34
NUBP1P53384 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.69□□□□□ -1.34
NUBP1P53384 ATP5LP3-201ENST00000514223 304 ntBASIC6.69□□□□□ -1.34
NUBP1P53384 RNU6-1256P-201ENST00000516539 103 ntBASIC6.69□□□□□ -1.34
NUBP1P53384 IGKV3D-25-201ENST00000519599 235 ntBASIC6.69□□□□□ -1.34
NUBP1P53384 NDUFA5P6-201ENST00000542110 379 ntBASIC6.69□□□□□ -1.34
NUBP1P53384 Y_RNA.757-201ENST00000578934 114 ntBASIC6.69□□□□□ -1.34
NUBP1P53384 MIR1273E-201ENST00000581165 102 ntBASIC6.69□□□□□ -1.34
NUBP1P53384 COX6CP7-201ENST00000597056 208 ntBASIC6.69□□□□□ -1.34
NUBP1P53384 AC105254.2-201ENST00000603636 436 ntBASIC6.69□□□□□ -1.34
NUBP1P53384 SNORD96A-201ENST00000606577 79 ntBASIC6.69□□□□□ -1.34
NUBP1P53384 SNORA16A-202ENST00000628458 135 ntBASIC6.69□□□□□ -1.34
NUBP1P53384 MIR3914-2-201ENST00000637339 95 ntBASIC6.69□□□□□ -1.34
NUBP1P53384 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC6.69□□□□□ -1.34
NUBP1P53384 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NUBP1P53384 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC6.69□□□□□ -1.34
NUBP1P53384 LRRC37A11P-202ENST00000579258 3717 ntBASIC6.69□□□□□ -1.34
NUBP1P53384 AC104964.2-201ENST00000562242 4641 ntBASIC6.69□□□□□ -1.34
NUBP1P53384 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NUBP1P53384 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
NUBP1P53384 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NUBP1P53384 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
NUBP1P53384 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NUBP1P53384 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
NUBP1P53384 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.68□□□□□ -1.34
NUBP1P53384 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC6.68□□□□□ -1.34
NUBP1P53384 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
NUBP1P53384 MFSD8-239ENST00000641590 2479 ntBASIC6.68□□□□□ -1.34
NUBP1P53384 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.68□□□□□ -1.34
NUBP1P53384 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
NUBP1P53384 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
NUBP1P53384 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
NUBP1P53384 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
NUBP1P53384 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
NUBP1P53384 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
NUBP1P53384 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
NUBP1P53384 RNU6-324P-201ENST00000363957 106 ntBASIC6.68□□□□□ -1.34
NUBP1P53384 Y_RNA.287-201ENST00000364853 94 ntBASIC6.68□□□□□ -1.34
NUBP1P53384 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.68□□□□□ -1.34
NUBP1P53384 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.68□□□□□ -1.34
NUBP1P53384 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.68□□□□□ -1.34
NUBP1P53384 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.68□□□□□ -1.34
NUBP1P53384 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
NUBP1P53384 MRPS21P3-201ENST00000436696 262 ntBASIC6.68□□□□□ -1.34
NUBP1P53384 AP000281.1-201ENST00000444036 316 ntBASIC6.68□□□□□ -1.34
NUBP1P53384 RN7SL610P-201ENST00000463845 291 ntBASIC6.68□□□□□ -1.34
NUBP1P53384 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.68□□□□□ -1.34
NUBP1P53384 GM2AP2-201ENST00000491764 562 ntBASIC6.68□□□□□ -1.34
NUBP1P53384 MLLT10P2-201ENST00000506434 249 ntBASIC6.68□□□□□ -1.34
NUBP1P53384 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC6.68□□□□□ -1.34
NUBP1P53384 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.68□□□□□ -1.34
NUBP1P53384 RN7SKP35-201ENST00000517210 151 ntBASIC6.68□□□□□ -1.34
NUBP1P53384 IGLV2-28-201ENST00000520681 304 ntBASIC6.68□□□□□ -1.34
NUBP1P53384 MAL2-206ENST00000522187 547 ntTSL 4 BASIC6.68□□□□□ -1.34
NUBP1P53384 HMGN2P47-201ENST00000559378 272 ntBASIC6.68□□□□□ -1.34
NUBP1P53384 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.68□□□□□ -1.34
NUBP1P53384 RPS11-202ENST00000594493 575 ntTSL 3 BASIC6.68□□□□□ -1.34
NUBP1P53384 AL391261.4-201ENST00000616012 481 ntBASIC6.68□□□□□ -1.34
NUBP1P53384 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC6.68□□□□□ -1.34
NUBP1P53384 MIR3674-201ENST00000636576 68 ntBASIC6.68□□□□□ -1.34
NUBP1P53384 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
NUBP1P53384 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
NUBP1P53384 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.68□□□□□ -1.34
NUBP1P53384 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
NUBP1P53384 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC6.68□□□□□ -1.34
NUBP1P53384 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
NUBP1P53384 AC092111.1-201ENST00000618256 3358 ntBASIC6.68□□□□□ -1.34
NUBP1P53384 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC6.68□□□□□ -1.34
NUBP1P53384 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.67□□□□□ -1.34
NUBP1P53384 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
NUBP1P53384 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
NUBP1P53384 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC6.67□□□□□ -1.34
NUBP1P53384 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
NUBP1P53384 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms