Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.24□□□□□ -1.89
BRD4O60885 MTATP6P4-201ENST00000427725 675 ntBASIC3.24□□□□□ -1.89
BRD4O60885 RPS26P56-201ENST00000444468 240 ntBASIC3.24□□□□□ -1.89
BRD4O60885 C1DP3-201ENST00000455013 423 ntBASIC3.24□□□□□ -1.89
BRD4O60885 AC026436.1-201ENST00000510537 270 ntBASIC3.24□□□□□ -1.89
BRD4O60885 AC107222.1-201ENST00000510899 637 ntBASIC3.24□□□□□ -1.89
BRD4O60885 AC067904.2-201ENST00000517322 1283 ntBASIC3.24□□□□□ -1.89
BRD4O60885 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.24□□□□□ -1.89
BRD4O60885 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.24□□□□□ -1.89
BRD4O60885 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.24□□□□□ -1.89
BRD4O60885 AC009163.5-201ENST00000575421 637 ntBASIC3.24□□□□□ -1.89
BRD4O60885 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.24□□□□□ -1.89
BRD4O60885 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
BRD4O60885 AP000676.4-201ENST00000624659 623 ntBASIC3.24□□□□□ -1.89
BRD4O60885 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
BRD4O60885 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
BRD4O60885 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
BRD4O60885 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.23□□□□□ -1.89
BRD4O60885 MTND5P6-201ENST00000422338 1798 ntBASIC3.23□□□□□ -1.89
BRD4O60885 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
BRD4O60885 MAPK10-322ENST00000641485 4530 ntBASIC3.23□□□□□ -1.89
BRD4O60885 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.23□□□□□ -1.89
BRD4O60885 RNU6-76P-201ENST00000384060 104 ntBASIC3.23□□□□□ -1.89
BRD4O60885 RNU6-253P-201ENST00000384730 105 ntBASIC3.23□□□□□ -1.89
BRD4O60885 AL121578.1-201ENST00000428051 892 ntBASIC3.23□□□□□ -1.89
BRD4O60885 RPS23P3-201ENST00000470993 430 ntBASIC3.23□□□□□ -1.89
BRD4O60885 CKS1BP2-201ENST00000497342 240 ntBASIC3.23□□□□□ -1.89
BRD4O60885 ZNF92P3-201ENST00000596594 954 ntBASIC3.23□□□□□ -1.89
BRD4O60885 AC068313.1-201ENST00000604028 1008 ntBASIC3.23□□□□□ -1.89
BRD4O60885 AC117490.2-201ENST00000610042 594 ntBASIC3.23□□□□□ -1.89
BRD4O60885 AL110115.1-201ENST00000614396 364 ntBASIC3.23□□□□□ -1.89
BRD4O60885 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.23□□□□□ -1.89
BRD4O60885 AC002543.1-201ENST00000299783 1954 ntBASIC3.23□□□□□ -1.89
BRD4O60885 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.22□□□□□ -1.89
BRD4O60885 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.22□□□□□ -1.89
BRD4O60885 RPL21P75-201ENST00000396599 483 ntBASIC3.22□□□□□ -1.89
BRD4O60885 RPL21P28-201ENST00000401418 483 ntBASIC3.22□□□□□ -1.89
BRD4O60885 AL592114.1-201ENST00000403842 483 ntBASIC3.22□□□□□ -1.89
BRD4O60885 RNA5SP492-201ENST00000411330 114 ntBASIC3.22□□□□□ -1.89
BRD4O60885 RAD23BP2-201ENST00000416003 1207 ntBASIC3.22□□□□□ -1.89
BRD4O60885 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.22□□□□□ -1.89
BRD4O60885 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
BRD4O60885 RPL21P39-201ENST00000463605 483 ntBASIC3.22□□□□□ -1.89
BRD4O60885 AC011979.1-201ENST00000472300 483 ntBASIC3.22□□□□□ -1.89
BRD4O60885 AC010301.1-201ENST00000473936 355 ntBASIC3.22□□□□□ -1.89
BRD4O60885 AC087879.1-201ENST00000474343 374 ntBASIC3.22□□□□□ -1.89
BRD4O60885 RPL21P93-201ENST00000480465 489 ntBASIC3.22□□□□□ -1.89
BRD4O60885 AC233702.1-201ENST00000482905 502 ntBASIC3.22□□□□□ -1.89
BRD4O60885 AC087190.1-201ENST00000484462 480 ntBASIC3.22□□□□□ -1.89
BRD4O60885 FAM172BP-201ENST00000487497 1089 ntBASIC3.22□□□□□ -1.89
BRD4O60885 AC093591.1-201ENST00000491435 481 ntBASIC3.22□□□□□ -1.89
BRD4O60885 RPL21P16-201ENST00000495531 483 ntBASIC3.22□□□□□ -1.89
BRD4O60885 RPL21P131-201ENST00000497298 483 ntBASIC3.22□□□□□ -1.89
BRD4O60885 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.22□□□□□ -1.89
BRD4O60885 AC117525.1-201ENST00000515228 503 ntBASIC3.22□□□□□ -1.89
BRD4O60885 RNU6ATAC9P-201ENST00000516210 116 ntBASIC3.22□□□□□ -1.89
BRD4O60885 HSPE1P18-201ENST00000517602 280 ntBASIC3.22□□□□□ -1.89
BRD4O60885 AP000867.2-201ENST00000532468 320 ntBASIC3.22□□□□□ -1.89
BRD4O60885 HSPE1P20-201ENST00000538133 289 ntBASIC3.22□□□□□ -1.89
BRD4O60885 SETP2-201ENST00000553886 926 ntBASIC3.22□□□□□ -1.89
BRD4O60885 AL049870.4-201ENST00000555741 486 ntBASIC3.22□□□□□ -1.89
BRD4O60885 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.22□□□□□ -1.89
BRD4O60885 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC3.22□□□□□ -1.89
BRD4O60885 NRBF2P1-201ENST00000587407 859 ntBASIC3.22□□□□□ -1.89
BRD4O60885 AL137847.3-201ENST00000611521 109 ntBASIC3.22□□□□□ -1.89
BRD4O60885 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.22□□□□□ -1.89
BRD4O60885 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.22□□□□□ -1.89
BRD4O60885 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
BRD4O60885 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.89
BRD4O60885 AC104454.1-201ENST00000421341 1401 ntBASIC3.21□□□□□ -1.9
BRD4O60885 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
BRD4O60885 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
BRD4O60885 TOMM22P1-201ENST00000418578 312 ntBASIC3.21□□□□□ -1.9
BRD4O60885 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.21□□□□□ -1.9
BRD4O60885 ARL5AP3-201ENST00000439327 386 ntBASIC3.21□□□□□ -1.9
BRD4O60885 RPL23AP58-201ENST00000440453 469 ntBASIC3.21□□□□□ -1.9
BRD4O60885 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.21□□□□□ -1.9
BRD4O60885 RPL34P26-201ENST00000445636 354 ntBASIC3.21□□□□□ -1.9
BRD4O60885 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.21□□□□□ -1.9
BRD4O60885 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.21□□□□□ -1.9
BRD4O60885 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.21□□□□□ -1.9
BRD4O60885 AC008716.1-201ENST00000511084 513 ntBASIC3.21□□□□□ -1.9
BRD4O60885 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.21□□□□□ -1.9
BRD4O60885 AC016727.1-205ENST00000605437 569 ntBASIC3.21□□□□□ -1.9
BRD4O60885 AC008962.1-201ENST00000605729 304 ntBASIC3.21□□□□□ -1.9
BRD4O60885 AL136981.2-201ENST00000617319 734 ntBASIC3.21□□□□□ -1.9
BRD4O60885 OR4G2P-202ENST00000641004 1759 ntBASIC3.2□□□□□ -1.9
BRD4O60885 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
BRD4O60885 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
BRD4O60885 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
BRD4O60885 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC3.2□□□□□ -1.9
BRD4O60885 RNU6-799P-201ENST00000363567 107 ntBASIC3.2□□□□□ -1.9
BRD4O60885 CD24P4-201ENST00000382840 243 ntBASIC3.2□□□□□ -1.9
BRD4O60885 RNA5SP181-201ENST00000410246 98 ntBASIC3.2□□□□□ -1.9
BRD4O60885 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.2□□□□□ -1.9
BRD4O60885 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.2□□□□□ -1.9
BRD4O60885 HMGN2P23-201ENST00000456759 269 ntBASIC3.2□□□□□ -1.9
BRD4O60885 snoU13.7-201ENST00000459220 104 ntBASIC3.2□□□□□ -1.9
BRD4O60885 RPL23AP70-201ENST00000483361 460 ntBASIC3.2□□□□□ -1.9
BRD4O60885 LINC00888-204ENST00000487386 421 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms