Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA9Q9Y5G4 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.41□□□□□ -1.7
PCDHGA9Q9Y5G4 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.41□□□□□ -1.7
PCDHGA9Q9Y5G4 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA9Q9Y5G4 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA9Q9Y5G4 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
PCDHGA9Q9Y5G4 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA9Q9Y5G4 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.41□□□□□ -1.7
PCDHGA9Q9Y5G4 GABPAP-201ENST00000419271 1356 ntBASIC4.4□□□□□ -1.7
PCDHGA9Q9Y5G4 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PCDHGA9Q9Y5G4 AL137003.2-201ENST00000606924 2538 ntBASIC4.4□□□□□ -1.7
PCDHGA9Q9Y5G4 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.4□□□□□ -1.7
PCDHGA9Q9Y5G4 Y_RNA.159-201ENST00000363674 87 ntBASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 SNORA23-201ENST00000365128 182 ntBASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 RNU6-606P-201ENST00000384721 111 ntBASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 AC097374.1-203ENST00000400783 485 ntBASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 RPS3AP24-201ENST00000407896 734 ntBASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 MTND4LP11-201ENST00000422184 280 ntBASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 MTCO1P39-201ENST00000426148 480 ntBASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 AL732292.1-201ENST00000426692 226 ntBASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 AC004975.1-201ENST00000428733 208 ntBASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 USP9YP7-201ENST00000436723 430 ntBASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 USP9YP32-201ENST00000452432 430 ntBASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 RPS24P6-201ENST00000452670 400 ntBASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 snoU13.24-201ENST00000458998 104 ntBASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 RPL7AP28-201ENST00000464513 571 ntBASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 AC108751.2-201ENST00000469993 231 ntBASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 RPL36AP51-201ENST00000487216 318 ntBASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 FCF1P3-201ENST00000496394 590 ntBASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 AC007016.1-201ENST00000512110 244 ntBASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 SCARNA24.1-201ENST00000516465 137 ntBASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 AC104383.1-201ENST00000530297 370 ntBASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 AC109635.4-202ENST00000531666 412 ntBASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 AC125611.2-201ENST00000551907 647 ntBASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 AL049839.1-201ENST00000556151 657 ntBASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 AC234778.2-201ENST00000566241 354 ntBASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 MTCO3P24-201ENST00000572729 782 ntBASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 SNORA74C-1-201ENST00000580726 201 ntBASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 AP002360.4-201ENST00000606980 481 ntBASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 AC008536.2-201ENST00000607284 349 ntBASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 AL158196.1-201ENST00000616786 434 ntBASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 AL353748.2-201ENST00000622148 471 ntBASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 AC067931.1-201ENST00000624190 671 ntBASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 AL136313.1-201ENST00000624804 202 ntBASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 AC116096.1-201ENST00000566804 2314 ntBASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 EXOC5P1-201ENST00000510543 1969 ntBASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 AC010300.1-201ENST00000600671 5134 ntBASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 AC092326.2-201ENST00000624772 1561 ntBASIC4.4□□□□□ -1.71
PCDHGA9Q9Y5G4 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 AC125257.1-201ENST00000560400 2930 ntBASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 AL157700.1-201ENST00000561973 1432 ntBASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 RNU6-960P-201ENST00000364056 120 ntBASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 RNU6-76P-201ENST00000384060 104 ntBASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 RNU6-629P-201ENST00000384061 103 ntBASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 MRPL50P2-201ENST00000416821 482 ntBASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 SSXP9-201ENST00000417503 292 ntBASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 HMGB3P20-201ENST00000417997 600 ntBASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 MTND1P2-201ENST00000430604 821 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms