Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
LMX1AQ8TE12 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.41□□□□□ -2.02
LMX1AQ8TE12 ZNF658B-202ENST00000615961 3375 ntBASIC2.41□□□□□ -2.02
LMX1AQ8TE12 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
LMX1AQ8TE12 MTND4P21-201ENST00000453886 1357 ntBASIC2.41□□□□□ -2.02
LMX1AQ8TE12 MTND5P11-201ENST00000511037 1812 ntBASIC2.41□□□□□ -2.02
LMX1AQ8TE12 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
LMX1AQ8TE12 MIR592-201ENST00000384959 97 ntBASIC2.41□□□□□ -2.02
LMX1AQ8TE12 NPM1P10-201ENST00000398310 865 ntBASIC2.41□□□□□ -2.02
LMX1AQ8TE12 AL591034.1-201ENST00000407447 340 ntBASIC2.41□□□□□ -2.02
LMX1AQ8TE12 Z98742.3-201ENST00000418637 326 ntBASIC2.41□□□□□ -2.02
LMX1AQ8TE12 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC2.41□□□□□ -2.02
LMX1AQ8TE12 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.41□□□□□ -2.02
LMX1AQ8TE12 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.41□□□□□ -2.02
LMX1AQ8TE12 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.41□□□□□ -2.02
LMX1AQ8TE12 UBL5P3-201ENST00000475112 231 ntBASIC2.41□□□□□ -2.02
LMX1AQ8TE12 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.41□□□□□ -2.02
LMX1AQ8TE12 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC2.41□□□□□ -2.02
LMX1AQ8TE12 AC234781.5-201ENST00000508429 271 ntBASIC2.41□□□□□ -2.02
LMX1AQ8TE12 AC133963.2-201ENST00000513686 578 ntBASIC2.41□□□□□ -2.02
LMX1AQ8TE12 RNU1-41P-201ENST00000516161 162 ntBASIC2.41□□□□□ -2.02
LMX1AQ8TE12 RNU1-48P-201ENST00000516400 162 ntBASIC2.41□□□□□ -2.02
LMX1AQ8TE12 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.41□□□□□ -2.02
LMX1AQ8TE12 AC239860.2-201ENST00000525886 270 ntBASIC2.41□□□□□ -2.02
LMX1AQ8TE12 AC021269.2-201ENST00000532318 330 ntBASIC2.41□□□□□ -2.02
LMX1AQ8TE12 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
LMX1AQ8TE12 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.41□□□□□ -2.02
LMX1AQ8TE12 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.41□□□□□ -2.02
LMX1AQ8TE12 AC073387.2-201ENST00000604797 784 ntBASIC2.41□□□□□ -2.02
LMX1AQ8TE12 AC079791.1-201ENST00000605356 973 ntBASIC2.41□□□□□ -2.02
LMX1AQ8TE12 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.41□□□□□ -2.02
LMX1AQ8TE12 AL359198.2-201ENST00000611836 194 ntBASIC2.41□□□□□ -2.02
LMX1AQ8TE12 AC018926.3-201ENST00000618841 406 ntBASIC2.41□□□□□ -2.02
LMX1AQ8TE12 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.41□□□□□ -2.02
LMX1AQ8TE12 LRRC77P-213ENST00000637727 880 ntBASIC2.41□□□□□ -2.02
LMX1AQ8TE12 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
LMX1AQ8TE12 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.4□□□□□ -2.02
LMX1AQ8TE12 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.4□□□□□ -2.02
LMX1AQ8TE12 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.02
LMX1AQ8TE12 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.4□□□□□ -2.02
LMX1AQ8TE12 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
LMX1AQ8TE12 SNORD88.1-201ENST00000408684 91 ntBASIC2.4□□□□□ -2.03
LMX1AQ8TE12 RNU6-1077P-201ENST00000410506 102 ntBASIC2.4□□□□□ -2.03
LMX1AQ8TE12 RN7SKP192-201ENST00000411291 327 ntBASIC2.4□□□□□ -2.03
LMX1AQ8TE12 AC109780.2-201ENST00000413467 845 ntBASIC2.4□□□□□ -2.03
LMX1AQ8TE12 TATDN1P1-201ENST00000414123 891 ntBASIC2.4□□□□□ -2.03
LMX1AQ8TE12 AC233728.2-201ENST00000425348 757 ntBASIC2.4□□□□□ -2.03
LMX1AQ8TE12 RSL24D1P8-201ENST00000434442 492 ntBASIC2.4□□□□□ -2.03
LMX1AQ8TE12 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.4□□□□□ -2.03
LMX1AQ8TE12 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.4□□□□□ -2.03
LMX1AQ8TE12 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
LMX1AQ8TE12 RN7SL499P-201ENST00000481141 276 ntBASIC2.4□□□□□ -2.03
LMX1AQ8TE12 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.4□□□□□ -2.03
LMX1AQ8TE12 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
LMX1AQ8TE12 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.4□□□□□ -2.03
LMX1AQ8TE12 RNA5SP76-201ENST00000516277 87 ntBASIC2.4□□□□□ -2.03
LMX1AQ8TE12 SNORA31.26-201ENST00000517250 137 ntBASIC2.4□□□□□ -2.03
LMX1AQ8TE12 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC2.4□□□□□ -2.03
LMX1AQ8TE12 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.4□□□□□ -2.03
LMX1AQ8TE12 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.4□□□□□ -2.03
LMX1AQ8TE12 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.4□□□□□ -2.03
LMX1AQ8TE12 AL731537.2-201ENST00000561565 951 ntBASIC2.4□□□□□ -2.03
LMX1AQ8TE12 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.4□□□□□ -2.03
LMX1AQ8TE12 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.4□□□□□ -2.03
LMX1AQ8TE12 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.4□□□□□ -2.03
LMX1AQ8TE12 AP001029.3-201ENST00000588063 596 ntBASIC2.4□□□□□ -2.03
LMX1AQ8TE12 BDH2P1-201ENST00000602288 736 ntBASIC2.4□□□□□ -2.03
LMX1AQ8TE12 AL450270.1-201ENST00000606160 391 ntBASIC2.4□□□□□ -2.03
LMX1AQ8TE12 AC020658.4-201ENST00000613987 684 ntBASIC2.4□□□□□ -2.03
LMX1AQ8TE12 AL110115.1-201ENST00000614396 364 ntBASIC2.4□□□□□ -2.03
LMX1AQ8TE12 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.4□□□□□ -2.03
LMX1AQ8TE12 AC003001.2-201ENST00000616294 831 ntBASIC2.4□□□□□ -2.03
LMX1AQ8TE12 AP003400.6-201ENST00000624698 740 ntBASIC2.4□□□□□ -2.03
LMX1AQ8TE12 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
LMX1AQ8TE12 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.4□□□□□ -2.03
LMX1AQ8TE12 MFSD8-213ENST00000641134 1327 ntBASIC2.4□□□□□ -2.03
LMX1AQ8TE12 SEC63P2-201ENST00000503863 1939 ntBASIC2.39□□□□□ -2.03
LMX1AQ8TE12 RNU6-1005P-201ENST00000384519 107 ntBASIC2.39□□□□□ -2.03
LMX1AQ8TE12 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
LMX1AQ8TE12 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
LMX1AQ8TE12 SNORA26.7-201ENST00000391288 122 ntBASIC2.39□□□□□ -2.03
LMX1AQ8TE12 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
LMX1AQ8TE12 DSTNP4-201ENST00000399472 474 ntBASIC2.39□□□□□ -2.03
LMX1AQ8TE12 AL590004.2-201ENST00000404787 371 ntBASIC2.39□□□□□ -2.03
LMX1AQ8TE12 RNA5SP56-201ENST00000410277 118 ntBASIC2.39□□□□□ -2.03
LMX1AQ8TE12 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.39□□□□□ -2.03
LMX1AQ8TE12 AL135786.1-201ENST00000415892 214 ntBASIC2.39□□□□□ -2.03
LMX1AQ8TE12 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.39□□□□□ -2.03
LMX1AQ8TE12 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.39□□□□□ -2.03
LMX1AQ8TE12 RPL39P40-201ENST00000445481 146 ntBASIC2.39□□□□□ -2.03
LMX1AQ8TE12 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.39□□□□□ -2.03
LMX1AQ8TE12 AC008571.1-201ENST00000467232 300 ntBASIC2.39□□□□□ -2.03
LMX1AQ8TE12 HESX1-202ENST00000473921 757 ntTSL 5 BASIC2.39□□□□□ -2.03
LMX1AQ8TE12 AC087879.1-201ENST00000474343 374 ntBASIC2.39□□□□□ -2.03
LMX1AQ8TE12 RPL23AP11-201ENST00000475260 469 ntBASIC2.39□□□□□ -2.03
LMX1AQ8TE12 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC2.39□□□□□ -2.03
LMX1AQ8TE12 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.39□□□□□ -2.03
LMX1AQ8TE12 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
LMX1AQ8TE12 AC019227.1-201ENST00000526902 510 ntBASIC2.39□□□□□ -2.03
LMX1AQ8TE12 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms