Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AC020633.1-201ENST00000468439 2247 ntBASIC5.74□□□□□ -1.49
FOXR1Q6PIV2 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
FOXR1Q6PIV2 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
FOXR1Q6PIV2 RN7SKP162-201ENST00000363605 345 ntBASIC5.74□□□□□ -1.49
FOXR1Q6PIV2 RNY1-201ENST00000364228 113 ntBASIC5.74□□□□□ -1.49
FOXR1Q6PIV2 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
FOXR1Q6PIV2 MIR143-201ENST00000385300 106 ntBASIC5.74□□□□□ -1.49
FOXR1Q6PIV2 AC097713.2-201ENST00000430199 356 ntBASIC5.74□□□□□ -1.49
FOXR1Q6PIV2 AC004383.1-201ENST00000438135 289 ntBASIC5.74□□□□□ -1.49
FOXR1Q6PIV2 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.74□□□□□ -1.49
FOXR1Q6PIV2 EEF1B2P6-201ENST00000445713 673 ntBASIC5.74□□□□□ -1.49
FOXR1Q6PIV2 RN7SL515P-201ENST00000463999 297 ntBASIC5.74□□□□□ -1.49
FOXR1Q6PIV2 DEFB109F-201ENST00000491870 277 ntBASIC5.74□□□□□ -1.49
FOXR1Q6PIV2 AC108078.2-201ENST00000510750 236 ntBASIC5.74□□□□□ -1.49
FOXR1Q6PIV2 AP006245.2-201ENST00000522004 300 ntBASIC5.74□□□□□ -1.49
FOXR1Q6PIV2 AP001922.4-201ENST00000526967 290 ntBASIC5.74□□□□□ -1.49
FOXR1Q6PIV2 AP000648.1-201ENST00000529682 397 ntBASIC5.74□□□□□ -1.49
FOXR1Q6PIV2 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.74□□□□□ -1.49
FOXR1Q6PIV2 AC026371.1-201ENST00000551867 419 ntBASIC5.74□□□□□ -1.49
FOXR1Q6PIV2 AC040958.1-201ENST00000561102 201 ntBASIC5.74□□□□□ -1.49
FOXR1Q6PIV2 AC106782.4-201ENST00000568264 210 ntBASIC5.74□□□□□ -1.49
FOXR1Q6PIV2 MIR4505-201ENST00000582238 73 ntBASIC5.74□□□□□ -1.49
FOXR1Q6PIV2 AC008521.1-201ENST00000587471 187 ntBASIC5.74□□□□□ -1.49
FOXR1Q6PIV2 FO393422.1-201ENST00000603908 708 ntBASIC5.74□□□□□ -1.49
FOXR1Q6PIV2 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.74□□□□□ -1.49
FOXR1Q6PIV2 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC5.74□□□□□ -1.49
FOXR1Q6PIV2 TRIM51GP-201ENST00000534741 1350 ntBASIC5.74□□□□□ -1.49
FOXR1Q6PIV2 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.74□□□□□ -1.49
FOXR1Q6PIV2 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
FOXR1Q6PIV2 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
FOXR1Q6PIV2 AP001642.1-201ENST00000624727 2117 ntBASIC5.74□□□□□ -1.49
FOXR1Q6PIV2 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC5.74□□□□□ -1.49
FOXR1Q6PIV2 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC5.74□□□□□ -1.49
FOXR1Q6PIV2 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.74□□□□□ -1.49
FOXR1Q6PIV2 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.73□□□□□ -1.49
FOXR1Q6PIV2 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
FOXR1Q6PIV2 Z95327.2-201ENST00000414579 1873 ntBASIC5.73□□□□□ -1.49
FOXR1Q6PIV2 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
FOXR1Q6PIV2 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
FOXR1Q6PIV2 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
FOXR1Q6PIV2 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.73□□□□□ -1.49
FOXR1Q6PIV2 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
FOXR1Q6PIV2 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
FOXR1Q6PIV2 Y_RNA.81-201ENST00000362997 102 ntBASIC5.73□□□□□ -1.49
FOXR1Q6PIV2 RN7SKP160-201ENST00000363804 340 ntBASIC5.73□□□□□ -1.49
FOXR1Q6PIV2 RNU105B-201ENST00000364478 208 ntBASIC5.73□□□□□ -1.49
FOXR1Q6PIV2 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.73□□□□□ -1.49
FOXR1Q6PIV2 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
FOXR1Q6PIV2 RNU6-278P-201ENST00000390945 109 ntBASIC5.73□□□□□ -1.49
FOXR1Q6PIV2 MIR548H3-201ENST00000408771 118 ntBASIC5.73□□□□□ -1.49
FOXR1Q6PIV2 UBE2FP1-201ENST00000416536 447 ntBASIC5.73□□□□□ -1.49
FOXR1Q6PIV2 AC022022.1-201ENST00000430304 178 ntBASIC5.73□□□□□ -1.49
FOXR1Q6PIV2 AL353997.1-201ENST00000432936 108 ntBASIC5.73□□□□□ -1.49
FOXR1Q6PIV2 AL445928.1-201ENST00000435545 222 ntBASIC5.73□□□□□ -1.49
FOXR1Q6PIV2 RHOT1P3-201ENST00000436571 331 ntBASIC5.73□□□□□ -1.49
FOXR1Q6PIV2 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.73□□□□□ -1.49
FOXR1Q6PIV2 RPL23AP22-201ENST00000437556 453 ntBASIC5.73□□□□□ -1.49
FOXR1Q6PIV2 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.73□□□□□ -1.49
FOXR1Q6PIV2 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.73□□□□□ -1.49
FOXR1Q6PIV2 SNORD125-201ENST00000459538 96 ntBASIC5.73□□□□□ -1.49
FOXR1Q6PIV2 PLGLA-201ENST00000465668 449 ntBASIC5.73□□□□□ -1.49
FOXR1Q6PIV2 RN7SL466P-201ENST00000497546 295 ntBASIC5.73□□□□□ -1.49
FOXR1Q6PIV2 AC093852.1-201ENST00000503587 266 ntBASIC5.73□□□□□ -1.49
FOXR1Q6PIV2 RNU6-307P-201ENST00000516743 106 ntBASIC5.73□□□□□ -1.49
FOXR1Q6PIV2 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC5.73□□□□□ -1.49
FOXR1Q6PIV2 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.73□□□□□ -1.49
FOXR1Q6PIV2 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.73□□□□□ -1.49
FOXR1Q6PIV2 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.73□□□□□ -1.49
FOXR1Q6PIV2 AC006600.1-201ENST00000572529 153 ntBASIC5.73□□□□□ -1.49
FOXR1Q6PIV2 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.73□□□□□ -1.49
FOXR1Q6PIV2 AC090615.1-201ENST00000577519 154 ntBASIC5.73□□□□□ -1.49
FOXR1Q6PIV2 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.73□□□□□ -1.49
FOXR1Q6PIV2 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC5.73□□□□□ -1.49
FOXR1Q6PIV2 U2.17-201ENST00000611454 95 ntBASIC5.73□□□□□ -1.49
FOXR1Q6PIV2 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.73□□□□□ -1.49
FOXR1Q6PIV2 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.73□□□□□ -1.49
FOXR1Q6PIV2 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.73□□□□□ -1.49
FOXR1Q6PIV2 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
FOXR1Q6PIV2 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
FOXR1Q6PIV2 EIF2AP4-201ENST00000424793 1781 ntBASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 AC100778.3-201ENST00000580060 1750 ntBASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 AP004607.3-201ENST00000530354 3915 ntBASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 Y_RNA.48-201ENST00000362710 103 ntBASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 Y_RNA.237-201ENST00000364439 102 ntBASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 Y_RNA.269-201ENST00000364685 89 ntBASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 RNU6-398P-201ENST00000384143 109 ntBASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 SNORA51.11-201ENST00000384442 131 ntBASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 HMGB1P20-201ENST00000402555 677 ntBASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 AL024474.1-201ENST00000404655 591 ntBASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 RNU6-1156P-201ENST00000410365 100 ntBASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 AL139156.1-201ENST00000412785 841 ntBASIC5.72□□□□□ -1.49
FOXR1Q6PIV2 COX5BP7-201ENST00000414780 274 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms