| APLP2 | Q06481 | RNA5SP438-201 | ENST00000516561 | 112 nt | BASIC | 9.39 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | AP000424.2-201 | ENST00000523784 | 233 nt | TSL 3 BASIC | 9.39 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | AC103796.1-201 | ENST00000530663 | 358 nt | TSL 1 (best) BASIC | 9.39 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | AC004551.1-201 | ENST00000552784 | 575 nt | TSL 4 BASIC | 9.39 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | AP001180.2-201 | ENST00000579413 | 422 nt | TSL 5 BASIC | 9.39 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | uc_338.26-201 | ENST00000612659 | 160 nt | BASIC | 9.39 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | AC011476.5-201 | ENST00000615594 | 130 nt | BASIC | 9.39 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | WISP3-211 | ENST00000639360 | 1026 nt | TSL 5 BASIC | 9.39 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | MUC4-215 | ENST00000475231 | 16273 nt | APPRIS ALT2 TSL 5 BASIC | 9.39 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | BX664718.1-201 | ENST00000439824 | 3224 nt | TSL 2 BASIC | 9.39 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | RFX3-212 | ENST00000617270 | 9253 nt | APPRIS P1 TSL 2 BASIC | 9.39 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | RAB3GAP1-207 | ENST00000539493 | 3161 nt | TSL 5 BASIC | 9.39 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | KERA-201 | ENST00000266719 | 2162 nt | APPRIS P1 TSL 1 (best) BASIC | 9.39 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | AL121768.1-201 | ENST00000613917 | 2544 nt | BASIC | 9.38 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | HLA-DPA3-207 | ENST00000454398 | 229 nt | BASIC | 9.38 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | MEG8-215 | ENST00000555354 | 469 nt | TSL 3 BASIC | 9.38 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | MAFTRR-204 | ENST00000568389 | 506 nt | TSL 4 BASIC | 9.38 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | MIR4776-2-201 | ENST00000580204 | 80 nt | BASIC | 9.38 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | AC015908.2-202 | ENST00000585243 | 756 nt | TSL 3 BASIC | 9.38 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | AC174048.1-201 | ENST00000603389 | 144 nt | BASIC | 9.38 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | AL590099.1-201 | ENST00000615276 | 138 nt | BASIC | 9.38 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | AC008873.1-201 | ENST00000625051 | 138 nt | BASIC | 9.38 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | TRIP12-204 | ENST00000389045 | 5355 nt | APPRIS ALT2 TSL 1 (best) BASIC | 9.38 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | RIMS1-219 | ENST00000523963 | 3097 nt | TSL 2 BASIC | 9.38 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | CUBN-202 | ENST00000377833 | 11949 nt | APPRIS P1 TSL 1 (best) BASIC | 9.38 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | YPEL5-204 | ENST00000402003 | 2197 nt | APPRIS P1 TSL 2 BASIC | 9.37 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | CCR6-201 | ENST00000341935 | 4018 nt | APPRIS P1 TSL 1 (best) BASIC | 9.37 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | DNHD1-201 | ENST00000254579 | 14862 nt | APPRIS P1 TSL 5 BASIC | 9.37 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | LINC00624-202 | ENST00000621316 | 3372 nt | TSL 1 (best) BASIC | 9.37 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | OR6C2-202 | ENST00000641202 | 2105 nt | APPRIS P1 BASIC | 9.37 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | ZNF283-201 | ENST00000324461 | 2297 nt | APPRIS P1 TSL 1 (best) BASIC | 9.37 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | LARP4-203 | ENST00000398473 | 6427 nt | APPRIS P3 TSL 1 (best) BASIC | 9.37 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | NABP1-205 | ENST00000425611 | 1878 nt | APPRIS P1 TSL 1 (best) BASIC | 9.37 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | TTC6-201 | ENST00000267368 | 1681 nt | TSL 5 BASIC | 9.37 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | RNU6-270P-201 | ENST00000364131 | 105 nt | BASIC | 9.37 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | Y_RNA.275-201 | ENST00000364726 | 110 nt | BASIC | 9.37 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | C9orf92-201 | ENST00000380683 | 359 nt | APPRIS P2 TSL 3 BASIC | 9.37 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | RPL21P75-201 | ENST00000396599 | 483 nt | BASIC | 9.37 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | RPL21P28-201 | ENST00000401418 | 483 nt | BASIC | 9.37 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | RN7SKP159-201 | ENST00000410657 | 292 nt | BASIC | 9.37 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | AL590556.1-201 | ENST00000423231 | 483 nt | BASIC | 9.37 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | LINC01766-201 | ENST00000453968 | 362 nt | TSL 3 BASIC | 9.37 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | GEMIN2P1-201 | ENST00000454246 | 752 nt | BASIC | 9.37 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | RPL21P11-201 | ENST00000461458 | 483 nt | BASIC | 9.37 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | RPL21P39-201 | ENST00000463605 | 483 nt | BASIC | 9.37 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | AL136126.1-201 | ENST00000473603 | 402 nt | BASIC | 9.37 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | AC132942.1-201 | ENST00000486753 | 483 nt | BASIC | 9.37 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | AC093591.1-201 | ENST00000491435 | 481 nt | BASIC | 9.37 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | RPL21P16-201 | ENST00000495531 | 483 nt | BASIC | 9.37 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | AC021242.2-201 | ENST00000522765 | 454 nt | TSL 3 BASIC | 9.37 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | AC103798.1-201 | ENST00000532562 | 376 nt | TSL 2 BASIC | 9.37 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | ANAPC15-205 | ENST00000535503 | 734 nt | APPRIS P3 TSL 3 BASIC | 9.37 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | LINC02441-201 | ENST00000543651 | 552 nt | TSL 4 BASIC | 9.37 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | MIR132-201 | ENST00000591554 | 101 nt | BASIC | 9.37 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | AC015982.1-201 | ENST00000608113 | 465 nt | BASIC | 9.37 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | AC092958.1-201 | ENST00000467198 | 2569 nt | TSL 2 BASIC | 9.37 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | ZNF546-201 | ENST00000347077 | 7987 nt | APPRIS P3 TSL 1 (best) BASIC | 9.37 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | NOS1-201 | ENST00000317775 | 12158 nt | APPRIS P1 TSL 1 (best) BASIC | 9.37 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | RAP1GDS1-202 | ENST00000339360 | 2092 nt | APPRIS ALT1 TSL 1 (best) BASIC | 9.36 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | POLR1D-218 | ENST00000636817 | 4592 nt | TSL 5 BASIC | 9.36 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | ZNF737-201 | ENST00000427401 | 2867 nt | APPRIS P1 TSL 2 BASIC | 9.36 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | PALMD-201 | ENST00000263174 | 2510 nt | APPRIS P1 TSL 1 (best) BASIC | 9.36 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | DNAH7-202 | ENST00000409063 | 1845 nt | TSL 1 (best) BASIC | 9.36 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | CCR2-201 | ENST00000292301 | 2671 nt | TSL 5 BASIC | 9.36 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | ZNF322-205 | ENST00000471278 | 2675 nt | APPRIS P1 TSL 5 BASIC | 9.36 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | PTPRR-204 | ENST00000440835 | 2818 nt | APPRIS ALT2 TSL 1 (best) BASIC | 9.36 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | RNU6-595P-201 | ENST00000363944 | 107 nt | BASIC | 9.36 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | Y_RNA.358-201 | ENST00000365491 | 99 nt | BASIC | 9.36 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | ESRRG-208 | ENST00000391890 | 5542 nt | APPRIS P1 TSL 5 BASIC | 9.36 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | MYL6P5-201 | ENST00000412707 | 459 nt | BASIC | 9.36 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | LINC01701-201 | ENST00000419614 | 451 nt | TSL 2 BASIC | 9.36 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | EI24P4-201 | ENST00000423683 | 1078 nt | BASIC | 9.36 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | AC108488.1-202 | ENST00000439547 | 482 nt | TSL 3 BASIC | 9.36 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | AC010975.1-201 | ENST00000443301 | 669 nt | TSL 3 BASIC | 9.36 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | AL390730.1-201 | ENST00000457106 | 692 nt | TSL 2 BASIC | 9.36 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | ACA64.4-201 | ENST00000459070 | 127 nt | BASIC | 9.36 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | MDM4-213 | ENST00000507825 | 481 nt | TSL 1 (best) BASIC | 9.36 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | SAR1B-211 | ENST00000509937 | 455 nt | TSL 5 BASIC | 9.36 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | AC034223.1-201 | ENST00000511054 | 599 nt | TSL 3 BASIC | 9.36 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | AP006245.1-201 | ENST00000522549 | 120 nt | BASIC | 9.36 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | AP002989.1-201 | ENST00000533459 | 562 nt | TSL 4 BASIC | 9.36 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | AC130371.1-201 | ENST00000577023 | 230 nt | TSL 5 BASIC | 9.36 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | RPL23AP92-201 | ENST00000603609 | 255 nt | BASIC | 9.36 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | AC007566.2-201 | ENST00000603642 | 413 nt | BASIC | 9.36 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | AC129915.3-201 | ENST00000634128 | 948 nt | BASIC | 9.36 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | GYPB-216 | ENST00000638448 | 363 nt | APPRIS P1 TSL 1 (best) BASIC | 9.36 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | AC079601.1-201 | ENST00000547824 | 2791 nt | TSL 1 (best) BASIC | 9.36 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | ABCC9-204 | ENST00000538350 | 2672 nt | TSL 2 BASIC | 9.36 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | TRRAP-204 | ENST00000446306 | 12492 nt | APPRIS ALT2 TSL 5 BASIC | 9.36 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | DDX3Y-201 | ENST00000336079 | 4445 nt | APPRIS P1 TSL 1 (best) BASIC | 9.36 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | SLC12A6-218 | ENST00000560611 | 4239 nt | APPRIS ALT1 TSL 1 (best) BASIC | 9.36 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | GTDC1-204 | ENST00000392869 | 10514 nt | APPRIS P1 TSL 5 BASIC | 9.35 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | THRB-203 | ENST00000396671 | 7506 nt | APPRIS P2 TSL 5 BASIC | 9.35 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | STAU2-225 | ENST00000523558 | 1603 nt | TSL 2 BASIC | 9.35 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | CASC15-207 | ENST00000607048 | 1634 nt | TSL 2 BASIC | 9.35 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | AC027088.4-201 | ENST00000611559 | 1947 nt | BASIC | 9.35 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | CHD2-202 | ENST00000420239 | 2221 nt | TSL 1 (best) BASIC | 9.35 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | ZNF573-217 | ENST00000590414 | 2225 nt | APPRIS P1 TSL 1 (best) BASIC | 9.35 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | TRPC5OS-201 | ENST00000371970 | 2806 nt | APPRIS P1 TSL 1 (best) BASIC | 9.35 | □□□□□ -0.91 | | |
| APLP2 | Q06481 | SOX2-OT-218 | ENST00000498731 | 3576 nt | TSL 1 (best) BASIC | 9.35 | □□□□□ -0.91 | | |