Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 AC092638.1-201ENST00000411966 1275 ntBASIC2.74□□□□□ -1.97
SEMA3DO95025 MTCO3P12-201ENST00000416718 547 ntBASIC2.74□□□□□ -1.97
SEMA3DO95025 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.74□□□□□ -1.97
SEMA3DO95025 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.74□□□□□ -1.97
SEMA3DO95025 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.74□□□□□ -1.97
SEMA3DO95025 RPL31P54-201ENST00000429803 370 ntBASIC2.74□□□□□ -1.97
SEMA3DO95025 LSM1P1-201ENST00000438629 273 ntBASIC2.74□□□□□ -1.97
SEMA3DO95025 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.74□□□□□ -1.97
SEMA3DO95025 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC2.74□□□□□ -1.97
SEMA3DO95025 AC034236.1-201ENST00000469891 373 ntBASIC2.74□□□□□ -1.97
SEMA3DO95025 AIG1P1-201ENST00000503376 148 ntBASIC2.74□□□□□ -1.97
SEMA3DO95025 AC091860.1-201ENST00000505723 432 ntBASIC2.74□□□□□ -1.97
SEMA3DO95025 AC118282.2-201ENST00000508739 374 ntBASIC2.74□□□□□ -1.97
SEMA3DO95025 AC048346.1-201ENST00000510247 144 ntBASIC2.74□□□□□ -1.97
SEMA3DO95025 RNU6-885P-201ENST00000516607 104 ntBASIC2.74□□□□□ -1.97
SEMA3DO95025 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.74□□□□□ -1.97
SEMA3DO95025 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.74□□□□□ -1.97
SEMA3DO95025 AP003385.6-201ENST00000531603 374 ntBASIC2.74□□□□□ -1.97
SEMA3DO95025 ZNF971P-201ENST00000562068 1249 ntBASIC2.74□□□□□ -1.97
SEMA3DO95025 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.74□□□□□ -1.97
SEMA3DO95025 AP000787.2-201ENST00000604432 568 ntBASIC2.74□□□□□ -1.97
SEMA3DO95025 AL020991.1-201ENST00000612314 373 ntBASIC2.74□□□□□ -1.97
SEMA3DO95025 MIR6076-201ENST00000617521 113 ntBASIC2.74□□□□□ -1.97
SEMA3DO95025 AC092650.2-201ENST00000619984 902 ntBASIC2.74□□□□□ -1.97
SEMA3DO95025 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.74□□□□□ -1.97
SEMA3DO95025 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SEMA3DO95025 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.74□□□□□ -1.97
SEMA3DO95025 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SEMA3DO95025 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SEMA3DO95025 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SEMA3DO95025 AL645568.2-201ENST00000432815 1337 ntBASIC2.73□□□□□ -1.97
SEMA3DO95025 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.73□□□□□ -1.97
SEMA3DO95025 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.73□□□□□ -1.97
SEMA3DO95025 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.73□□□□□ -1.97
SEMA3DO95025 RNA5SP258-201ENST00000362750 119 ntBASIC2.73□□□□□ -1.97
SEMA3DO95025 VTRNA1-1-201ENST00000363120 99 ntBASIC2.73□□□□□ -1.97
SEMA3DO95025 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
SEMA3DO95025 SNORD116-23-201ENST00000384645 92 ntBASIC2.73□□□□□ -1.97
SEMA3DO95025 MCTS2P-201ENST00000394552 546 ntBASIC2.73□□□□□ -1.97
SEMA3DO95025 MTND4LP20-201ENST00000402379 270 ntBASIC2.73□□□□□ -1.97
SEMA3DO95025 MTCO2P31-201ENST00000402702 684 ntBASIC2.73□□□□□ -1.97
SEMA3DO95025 AL024507.1-201ENST00000412741 274 ntBASIC2.73□□□□□ -1.97
SEMA3DO95025 RAD23BP2-201ENST00000416003 1207 ntBASIC2.73□□□□□ -1.97
SEMA3DO95025 HMGN2P30-201ENST00000423237 256 ntBASIC2.73□□□□□ -1.97
SEMA3DO95025 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2.73□□□□□ -1.97
SEMA3DO95025 AC127537.2-201ENST00000439258 465 ntBASIC2.73□□□□□ -1.97
SEMA3DO95025 AL671855.1-201ENST00000446875 1203 ntBASIC2.73□□□□□ -1.97
SEMA3DO95025 NIPA2P5-201ENST00000452282 464 ntBASIC2.73□□□□□ -1.97
SEMA3DO95025 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SEMA3DO95025 DSTNP2-201ENST00000504533 515 ntBASIC2.73□□□□□ -1.97
SEMA3DO95025 RNA5SP341-201ENST00000516261 117 ntBASIC2.73□□□□□ -1.97
SEMA3DO95025 SCARNA13-201ENST00000516672 275 ntBASIC2.73□□□□□ -1.97
SEMA3DO95025 RNU6-826P-201ENST00000516827 104 ntBASIC2.73□□□□□ -1.97
SEMA3DO95025 RN7SKP57-201ENST00000517248 293 ntBASIC2.73□□□□□ -1.97
SEMA3DO95025 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.73□□□□□ -1.97
SEMA3DO95025 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.73□□□□□ -1.97
SEMA3DO95025 AL121603.1-201ENST00000553815 142 ntBASIC2.73□□□□□ -1.97
SEMA3DO95025 AL391156.1-201ENST00000554965 554 ntBASIC2.73□□□□□ -1.97
SEMA3DO95025 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC2.73□□□□□ -1.97
SEMA3DO95025 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.73□□□□□ -1.97
SEMA3DO95025 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.73□□□□□ -1.97
SEMA3DO95025 AC020895.1-201ENST00000595362 272 ntBASIC2.73□□□□□ -1.97
SEMA3DO95025 GAS5-AS1-201ENST00000602767 694 ntBASIC2.73□□□□□ -1.97
SEMA3DO95025 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.73□□□□□ -1.97
SEMA3DO95025 XIAPP1-201ENST00000603162 600 ntBASIC2.73□□□□□ -1.97
SEMA3DO95025 AC012468.1-201ENST00000604888 430 ntBASIC2.73□□□□□ -1.97
SEMA3DO95025 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
SEMA3DO95025 VN1R74P-201ENST00000613259 503 ntBASIC2.73□□□□□ -1.97
SEMA3DO95025 AL442067.2-201ENST00000614033 363 ntBASIC2.73□□□□□ -1.97
SEMA3DO95025 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.73□□□□□ -1.97
SEMA3DO95025 AC130650.2-201ENST00000618736 2403 ntBASIC2.73□□□□□ -1.97
SEMA3DO95025 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.73□□□□□ -1.97
SEMA3DO95025 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.72□□□□□ -1.97
SEMA3DO95025 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SEMA3DO95025 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
SEMA3DO95025 RNU6-582P-201ENST00000362989 107 ntBASIC2.72□□□□□ -1.97
SEMA3DO95025 RNU5B-1-201ENST00000363286 116 ntBASIC2.72□□□□□ -1.97
SEMA3DO95025 RNU6-115P-201ENST00000364310 107 ntBASIC2.72□□□□□ -1.97
SEMA3DO95025 RNU6-468P-201ENST00000384003 109 ntBASIC2.72□□□□□ -1.97
SEMA3DO95025 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
SEMA3DO95025 AL139098.1-201ENST00000407291 389 ntBASIC2.72□□□□□ -1.97
SEMA3DO95025 RNU2-25P-201ENST00000411041 191 ntBASIC2.72□□□□□ -1.97
SEMA3DO95025 FCF1P2-201ENST00000415284 583 ntBASIC2.72□□□□□ -1.97
SEMA3DO95025 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.72□□□□□ -1.97
SEMA3DO95025 HSFY1P1-201ENST00000423928 1178 ntBASIC2.72□□□□□ -1.97
SEMA3DO95025 AC022018.1-201ENST00000430685 241 ntBASIC2.72□□□□□ -1.97
SEMA3DO95025 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.72□□□□□ -1.97
SEMA3DO95025 RPL37P4-201ENST00000448908 268 ntBASIC2.72□□□□□ -1.97
SEMA3DO95025 RSL24D1P3-201ENST00000449255 495 ntBASIC2.72□□□□□ -1.97
SEMA3DO95025 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.72□□□□□ -1.97
SEMA3DO95025 AP001025.2-201ENST00000490908 477 ntBASIC2.72□□□□□ -1.97
SEMA3DO95025 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.72□□□□□ -1.97
SEMA3DO95025 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SEMA3DO95025 SCGB1D5P-201ENST00000515134 247 ntBASIC2.72□□□□□ -1.97
SEMA3DO95025 OR4R2P-201ENST00000530815 597 ntBASIC2.72□□□□□ -1.97
SEMA3DO95025 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.72□□□□□ -1.97
SEMA3DO95025 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.72□□□□□ -1.97
SEMA3DO95025 HPRT1P3-201ENST00000539521 576 ntBASIC2.72□□□□□ -1.97
SEMA3DO95025 AC128657.1-201ENST00000549459 145 ntBASIC2.72□□□□□ -1.97
SEMA3DO95025 LSM6P2-201ENST00000552208 177 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 236.7 ms