Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.69□□□□□ -1.66
CDK5RAP1Q96SZ6 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 AC025031.4-201ENST00000621248 3271 ntBASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 MTND4P35-201ENST00000604257 1375 ntBASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 RPL7P26-201ENST00000333817 754 ntBASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 Y_RNA.31-201ENST00000362574 102 ntBASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 Y_RNA.315-201ENST00000365117 102 ntBASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 RNU6-456P-201ENST00000384493 107 ntBASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 MIR659-201ENST00000384963 97 ntBASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 AL591416.1-201ENST00000404015 867 ntBASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 MTATP6P18-201ENST00000417994 673 ntBASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 AC236972.2-201ENST00000434979 310 ntBASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 IFNWP4-201ENST00000453148 294 ntBASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 AC053481.1-201ENST00000467217 306 ntBASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 RPL21P126-201ENST00000470049 478 ntBASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 AC233702.1-201ENST00000482905 502 ntBASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 AC002456.2-201ENST00000509356 380 ntBASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 AC005741.1-201ENST00000511094 432 ntBASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 RNU4-49P-201ENST00000516080 140 ntBASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 RNA5SP216-201ENST00000516111 123 ntBASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 AC068587.4-201ENST00000533893 186 ntBASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 TPMTP1-201ENST00000592307 737 ntBASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 AC104237.2-201ENST00000612456 443 ntBASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 DISC2.1-201ENST00000612827 205 ntBASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 AL442067.1-201ENST00000613261 223 ntBASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 AC040168.1-201ENST00000623594 991 ntBASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 AC139769.1-204ENST00000472297 1931 ntBASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 AL049555.1-201ENST00000562834 1933 ntBASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
CDK5RAP1Q96SZ6 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 SNORA62.2-201ENST00000364672 152 ntBASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 SNORA22B-201ENST00000383876 138 ntBASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 Y_RNA.384-201ENST00000383909 102 ntBASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 RNU6-196P-201ENST00000384315 107 ntBASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 MIR3065-201ENST00000390137 79 ntBASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 MIR320C1-201ENST00000408566 88 ntBASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 MTND3P8-201ENST00000412909 339 ntBASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 AL358176.2-201ENST00000425769 204 ntBASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 OR51AB1P-201ENST00000429046 620 ntBASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 RPL21P91-201ENST00000429231 479 ntBASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 IFNA20P-201ENST00000436840 528 ntBASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 RSU1P2-202ENST00000437884 485 ntBASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 CBX1P1-201ENST00000440184 427 ntBASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 AL590639.1-201ENST00000456484 337 ntBASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 Y_RNA.639-201ENST00000458981 102 ntBASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 RNU6-1218P-201ENST00000458990 108 ntBASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 RPL7AP28-201ENST00000464513 571 ntBASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 AC090096.1-201ENST00000489168 390 ntBASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 AC108022.1-201ENST00000493466 478 ntBASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 RN7SL812P-201ENST00000493791 279 ntBASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 AC106872.3-201ENST00000495104 446 ntBASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 RNU6-1137P-201ENST00000517073 99 ntBASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 IGKV2D-10-201ENST00000520194 281 ntBASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms