Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.75□□□□□ -1.81
NR1H4Q96RI1 IGKV2D-19-201ENST00000523346 262 ntBASIC3.75□□□□□ -1.81
NR1H4Q96RI1 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.75□□□□□ -1.81
NR1H4Q96RI1 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
NR1H4Q96RI1 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NR1H4Q96RI1 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.75□□□□□ -1.81
NR1H4Q96RI1 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.75□□□□□ -1.81
NR1H4Q96RI1 RPL23AP87-202ENST00000573039 466 ntBASIC3.75□□□□□ -1.81
NR1H4Q96RI1 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.75□□□□□ -1.81
NR1H4Q96RI1 AL359999.1-201ENST00000604513 294 ntBASIC3.75□□□□□ -1.81
NR1H4Q96RI1 AL354984.3-201ENST00000604803 325 ntBASIC3.75□□□□□ -1.81
NR1H4Q96RI1 AC068276.1-201ENST00000605793 379 ntBASIC3.75□□□□□ -1.81
NR1H4Q96RI1 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.75□□□□□ -1.81
NR1H4Q96RI1 AC095031.1-201ENST00000623685 672 ntBASIC3.75□□□□□ -1.81
NR1H4Q96RI1 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
NR1H4Q96RI1 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
NR1H4Q96RI1 AL672296.1-201ENST00000427780 2158 ntBASIC3.75□□□□□ -1.81
NR1H4Q96RI1 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.75□□□□□ -1.81
NR1H4Q96RI1 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
NR1H4Q96RI1 AC091152.2-201ENST00000591628 2569 ntBASIC3.74□□□□□ -1.81
NR1H4Q96RI1 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC3.74□□□□□ -1.81
NR1H4Q96RI1 DDX10P1-201ENST00000448545 1933 ntBASIC3.74□□□□□ -1.81
NR1H4Q96RI1 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NR1H4Q96RI1 SNORD116-9-201ENST00000384000 95 ntBASIC3.74□□□□□ -1.81
NR1H4Q96RI1 SNORD116-3-201ENST00000384287 95 ntBASIC3.74□□□□□ -1.81
NR1H4Q96RI1 SNORD116-7-201ENST00000384404 95 ntBASIC3.74□□□□□ -1.81
NR1H4Q96RI1 SNORD116-5-201ENST00000384462 95 ntBASIC3.74□□□□□ -1.81
NR1H4Q96RI1 AL136372.1-201ENST00000403060 228 ntBASIC3.74□□□□□ -1.81
NR1H4Q96RI1 RNU4-65P-201ENST00000410473 140 ntBASIC3.74□□□□□ -1.81
NR1H4Q96RI1 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.74□□□□□ -1.81
NR1H4Q96RI1 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC3.74□□□□□ -1.81
NR1H4Q96RI1 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.74□□□□□ -1.81
NR1H4Q96RI1 AL365338.1-201ENST00000422282 858 ntBASIC3.74□□□□□ -1.81
NR1H4Q96RI1 AL590762.4-201ENST00000425885 253 ntBASIC3.74□□□□□ -1.81
NR1H4Q96RI1 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC3.74□□□□□ -1.81
NR1H4Q96RI1 RPL23AP1-201ENST00000428990 471 ntBASIC3.74□□□□□ -1.81
NR1H4Q96RI1 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.74□□□□□ -1.81
NR1H4Q96RI1 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.74□□□□□ -1.81
NR1H4Q96RI1 SNRPGP9-201ENST00000456025 225 ntBASIC3.74□□□□□ -1.81
NR1H4Q96RI1 AC092324.1-201ENST00000468671 324 ntBASIC3.74□□□□□ -1.81
NR1H4Q96RI1 RN7SL354P-201ENST00000469282 294 ntBASIC3.74□□□□□ -1.81
NR1H4Q96RI1 SNRPGP3-201ENST00000469405 227 ntBASIC3.74□□□□□ -1.81
NR1H4Q96RI1 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
NR1H4Q96RI1 RN7SL826P-201ENST00000479724 288 ntBASIC3.74□□□□□ -1.81
NR1H4Q96RI1 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.74□□□□□ -1.81
NR1H4Q96RI1 SNORA31.8-201ENST00000516327 108 ntBASIC3.74□□□□□ -1.81
NR1H4Q96RI1 RN7SKP209-201ENST00000516888 304 ntBASIC3.74□□□□□ -1.81
NR1H4Q96RI1 AP000827.1-201ENST00000527814 258 ntBASIC3.74□□□□□ -1.81
NR1H4Q96RI1 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.74□□□□□ -1.81
NR1H4Q96RI1 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.74□□□□□ -1.81
NR1H4Q96RI1 AC069061.3-201ENST00000582254 823 ntBASIC3.74□□□□□ -1.81
NR1H4Q96RI1 UBE2L4-201ENST00000587688 464 ntBASIC3.74□□□□□ -1.81
NR1H4Q96RI1 AP001029.3-201ENST00000588063 596 ntBASIC3.74□□□□□ -1.81
NR1H4Q96RI1 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.74□□□□□ -1.81
NR1H4Q96RI1 AC012065.4-201ENST00000602445 679 ntBASIC3.74□□□□□ -1.81
NR1H4Q96RI1 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NR1H4Q96RI1 AC004908.2-201ENST00000609090 574 ntBASIC3.74□□□□□ -1.81
NR1H4Q96RI1 AL450472.3-201ENST00000615578 367 ntBASIC3.74□□□□□ -1.81
NR1H4Q96RI1 MIR8058-201ENST00000615737 89 ntBASIC3.74□□□□□ -1.81
NR1H4Q96RI1 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NR1H4Q96RI1 AL133383.2-201ENST00000622958 2336 ntBASIC3.74□□□□□ -1.81
NR1H4Q96RI1 AL158801.5-201ENST00000623123 465 ntBASIC3.74□□□□□ -1.81
NR1H4Q96RI1 AC092326.2-201ENST00000624772 1561 ntBASIC3.74□□□□□ -1.81
NR1H4Q96RI1 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.74□□□□□ -1.81
NR1H4Q96RI1 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.74□□□□□ -1.81
NR1H4Q96RI1 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
NR1H4Q96RI1 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NR1H4Q96RI1 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NR1H4Q96RI1 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
NR1H4Q96RI1 GABPAP-201ENST00000419271 1356 ntBASIC3.74□□□□□ -1.81
NR1H4Q96RI1 AC138915.3-201ENST00000562908 1389 ntBASIC3.74□□□□□ -1.81
NR1H4Q96RI1 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.74□□□□□ -1.81
NR1H4Q96RI1 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
NR1H4Q96RI1 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.74□□□□□ -1.81
NR1H4Q96RI1 AC058791.1-201ENST00000608412 3198 ntBASIC3.73□□□□□ -1.81
NR1H4Q96RI1 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.73□□□□□ -1.81
NR1H4Q96RI1 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.73□□□□□ -1.81
NR1H4Q96RI1 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.73□□□□□ -1.81
NR1H4Q96RI1 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
NR1H4Q96RI1 RNU4-21P-201ENST00000362802 126 ntBASIC3.73□□□□□ -1.81
NR1H4Q96RI1 RNU6-223P-201ENST00000362830 107 ntBASIC3.73□□□□□ -1.81
NR1H4Q96RI1 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
NR1H4Q96RI1 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
NR1H4Q96RI1 DEFB109C-201ENST00000382575 264 ntBASIC3.73□□□□□ -1.81
NR1H4Q96RI1 DEFB109B-201ENST00000382656 264 ntBASIC3.73□□□□□ -1.81
NR1H4Q96RI1 RNY3P10-201ENST00000384764 102 ntBASIC3.73□□□□□ -1.81
NR1H4Q96RI1 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.73□□□□□ -1.81
NR1H4Q96RI1 RPS3AP23-201ENST00000401762 784 ntBASIC3.73□□□□□ -1.81
NR1H4Q96RI1 CYCSP46-201ENST00000423569 204 ntBASIC3.73□□□□□ -1.81
NR1H4Q96RI1 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.73□□□□□ -1.81
NR1H4Q96RI1 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.73□□□□□ -1.81
NR1H4Q96RI1 TRIM60P18-201ENST00000441518 828 ntBASIC3.73□□□□□ -1.81
NR1H4Q96RI1 USP9YP12-201ENST00000450481 570 ntBASIC3.73□□□□□ -1.81
NR1H4Q96RI1 AL590365.1-201ENST00000450788 243 ntBASIC3.73□□□□□ -1.81
NR1H4Q96RI1 RPS11P1-201ENST00000451072 473 ntBASIC3.73□□□□□ -1.81
NR1H4Q96RI1 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.73□□□□□ -1.81
NR1H4Q96RI1 AC108860.1-201ENST00000484521 383 ntBASIC3.73□□□□□ -1.81
NR1H4Q96RI1 RPS3AP50-201ENST00000487064 803 ntBASIC3.73□□□□□ -1.81
NR1H4Q96RI1 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.73□□□□□ -1.81
NR1H4Q96RI1 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms