Protein–RNA interactions for Protein: Q16740

CLPP, ATP-dependent Clp protease proteolytic subunit, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPPQ16740 YWHAZP7-201ENST00000436906 631 ntBASIC3.34□□□□□ -1.87
CLPPQ16740 AC004854.1-201ENST00000440356 349 ntBASIC3.34□□□□□ -1.87
CLPPQ16740 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.34□□□□□ -1.87
CLPPQ16740 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.34□□□□□ -1.87
CLPPQ16740 RPS24P6-201ENST00000452670 400 ntBASIC3.34□□□□□ -1.87
CLPPQ16740 AC011979.1-201ENST00000472300 483 ntBASIC3.34□□□□□ -1.87
CLPPQ16740 AC068724.1-201ENST00000487100 792 ntBASIC3.34□□□□□ -1.87
CLPPQ16740 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.34□□□□□ -1.87
CLPPQ16740 OR4G11P-201ENST00000492842 939 ntBASIC3.34□□□□□ -1.87
CLPPQ16740 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CLPPQ16740 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CLPPQ16740 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.34□□□□□ -1.87
CLPPQ16740 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.34□□□□□ -1.87
CLPPQ16740 AC008489.1-201ENST00000524271 483 ntBASIC3.34□□□□□ -1.87
CLPPQ16740 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.34□□□□□ -1.87
CLPPQ16740 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CLPPQ16740 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.34□□□□□ -1.87
CLPPQ16740 AC005832.3-201ENST00000537929 631 ntBASIC3.34□□□□□ -1.87
CLPPQ16740 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.34□□□□□ -1.87
CLPPQ16740 HIGD1AP17-201ENST00000554576 276 ntBASIC3.34□□□□□ -1.87
CLPPQ16740 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.34□□□□□ -1.87
CLPPQ16740 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.34□□□□□ -1.87
CLPPQ16740 BNIP3P24-201ENST00000593398 557 ntBASIC3.34□□□□□ -1.87
CLPPQ16740 BNIP3P26-201ENST00000600827 554 ntBASIC3.34□□□□□ -1.87
CLPPQ16740 BDH2P1-201ENST00000602288 736 ntBASIC3.34□□□□□ -1.87
CLPPQ16740 AC011458.1-201ENST00000604034 617 ntBASIC3.34□□□□□ -1.87
CLPPQ16740 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.34□□□□□ -1.87
CLPPQ16740 AL157392.4-201ENST00000609756 345 ntBASIC3.34□□□□□ -1.87
CLPPQ16740 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.34□□□□□ -1.87
CLPPQ16740 AC016597.2-201ENST00000613256 341 ntBASIC3.34□□□□□ -1.87
CLPPQ16740 AC022509.4-201ENST00000621404 572 ntBASIC3.34□□□□□ -1.87
CLPPQ16740 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CLPPQ16740 AC040168.1-201ENST00000623594 991 ntBASIC3.34□□□□□ -1.87
CLPPQ16740 AP001002.2-201ENST00000625137 386 ntBASIC3.34□□□□□ -1.87
CLPPQ16740 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CLPPQ16740 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.34□□□□□ -1.88
CLPPQ16740 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
CLPPQ16740 AC244517.1-201ENST00000606030 2086 ntBASIC3.33□□□□□ -1.88
CLPPQ16740 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
CLPPQ16740 SNRPEP3-201ENST00000338402 276 ntBASIC3.33□□□□□ -1.88
CLPPQ16740 RNU6-560P-201ENST00000364007 108 ntBASIC3.33□□□□□ -1.88
CLPPQ16740 RNU6-413P-201ENST00000384115 107 ntBASIC3.33□□□□□ -1.88
CLPPQ16740 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CLPPQ16740 RNU6-1077P-201ENST00000410506 102 ntBASIC3.33□□□□□ -1.88
CLPPQ16740 RNU4-22P-201ENST00000411058 166 ntBASIC3.33□□□□□ -1.88
CLPPQ16740 MTCO2P8-201ENST00000412213 658 ntBASIC3.33□□□□□ -1.88
CLPPQ16740 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.33□□□□□ -1.88
CLPPQ16740 AL356320.2-201ENST00000417263 507 ntBASIC3.33□□□□□ -1.88
CLPPQ16740 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.33□□□□□ -1.88
CLPPQ16740 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.33□□□□□ -1.88
CLPPQ16740 EEF1A1P39-201ENST00000440791 250 ntBASIC3.33□□□□□ -1.88
CLPPQ16740 MTND2P20-201ENST00000440805 661 ntBASIC3.33□□□□□ -1.88
CLPPQ16740 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.33□□□□□ -1.88
CLPPQ16740 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.33□□□□□ -1.88
CLPPQ16740 AC007327.1-201ENST00000447461 264 ntBASIC3.33□□□□□ -1.88
CLPPQ16740 ZNF886P-201ENST00000450781 723 ntBASIC3.33□□□□□ -1.88
CLPPQ16740 RPL26P28-201ENST00000451325 435 ntBASIC3.33□□□□□ -1.88
CLPPQ16740 USP9YP34-201ENST00000453983 808 ntBASIC3.33□□□□□ -1.88
CLPPQ16740 AL445669.2-201ENST00000454425 421 ntBASIC3.33□□□□□ -1.88
CLPPQ16740 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CLPPQ16740 RPS4XP2-201ENST00000458402 793 ntBASIC3.33□□□□□ -1.88
CLPPQ16740 snoU109.4-201ENST00000458953 143 ntBASIC3.33□□□□□ -1.88
CLPPQ16740 AC146507.2-201ENST00000460608 476 ntBASIC3.33□□□□□ -1.88
CLPPQ16740 HMGB1P25-201ENST00000468402 607 ntBASIC3.33□□□□□ -1.88
CLPPQ16740 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.33□□□□□ -1.88
CLPPQ16740 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CLPPQ16740 AC025518.1-201ENST00000479856 347 ntBASIC3.33□□□□□ -1.88
CLPPQ16740 RN7SKP57-201ENST00000517248 293 ntBASIC3.33□□□□□ -1.88
CLPPQ16740 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.33□□□□□ -1.88
CLPPQ16740 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.33□□□□□ -1.88
CLPPQ16740 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.33□□□□□ -1.88
CLPPQ16740 EEF1B2P4-201ENST00000551398 348 ntBASIC3.33□□□□□ -1.88
CLPPQ16740 AL121603.1-201ENST00000553815 142 ntBASIC3.33□□□□□ -1.88
CLPPQ16740 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.33□□□□□ -1.88
CLPPQ16740 SNORD84-203ENST00000584275 78 ntBASIC3.33□□□□□ -1.88
CLPPQ16740 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.33□□□□□ -1.88
CLPPQ16740 AC069304.2-201ENST00000605154 435 ntBASIC3.33□□□□□ -1.88
CLPPQ16740 AC128687.1-201ENST00000605304 619 ntBASIC3.33□□□□□ -1.88
CLPPQ16740 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CLPPQ16740 U4.6-201ENST00000621618 127 ntBASIC3.33□□□□□ -1.88
CLPPQ16740 AC006963.1-201ENST00000624003 1052 ntBASIC3.33□□□□□ -1.88
CLPPQ16740 U6.101-201ENST00000637707 76 ntBASIC3.33□□□□□ -1.88
CLPPQ16740 LRRC77P-213ENST00000637727 880 ntBASIC3.33□□□□□ -1.88
CLPPQ16740 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.33□□□□□ -1.88
CLPPQ16740 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
CLPPQ16740 AL021368.2-201ENST00000606125 5352 ntBASIC3.33□□□□□ -1.88
CLPPQ16740 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.33□□□□□ -1.88
CLPPQ16740 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLPPQ16740 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CLPPQ16740 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLPPQ16740 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLPPQ16740 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLPPQ16740 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLPPQ16740 FRG1CP-201ENST00000358464 769 ntBASIC3.32□□□□□ -1.88
CLPPQ16740 NACA3P-201ENST00000359690 648 ntBASIC3.32□□□□□ -1.88
CLPPQ16740 RNU6-283P-201ENST00000364788 107 ntBASIC3.32□□□□□ -1.88
CLPPQ16740 RNU6-878P-201ENST00000384578 110 ntBASIC3.32□□□□□ -1.88
CLPPQ16740 ERHP2-201ENST00000402323 299 ntBASIC3.32□□□□□ -1.88
CLPPQ16740 HSFY4P-201ENST00000415994 1181 ntBASIC3.32□□□□□ -1.88
CLPPQ16740 DBIP2-201ENST00000419076 262 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms