Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.74□□□□□ -1.33
NUBP1P53384 U6.95-201ENST00000636931 70 ntBASIC6.74□□□□□ -1.33
NUBP1P53384 AC116667.2-201ENST00000641075 823 ntBASIC6.74□□□□□ -1.33
NUBP1P53384 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.74□□□□□ -1.33
NUBP1P53384 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NUBP1P53384 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
NUBP1P53384 GNG12-201ENST00000370982 4404 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NUBP1P53384 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC6.74□□□□□ -1.33
NUBP1P53384 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NUBP1P53384 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
NUBP1P53384 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NUBP1P53384 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NUBP1P53384 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NUBP1P53384 BOLL-204ENST00000430004 2987 ntTSL 2 BASIC6.74□□□□□ -1.33
NUBP1P53384 AP000432.2-201ENST00000624164 2048 ntBASIC6.74□□□□□ -1.33
NUBP1P53384 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
NUBP1P53384 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC6.74□□□□□ -1.33
NUBP1P53384 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC6.74□□□□□ -1.33
NUBP1P53384 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NUBP1P53384 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NUBP1P53384 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NUBP1P53384 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
NUBP1P53384 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NUBP1P53384 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
NUBP1P53384 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
NUBP1P53384 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.73□□□□□ -1.33
NUBP1P53384 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.73□□□□□ -1.33
NUBP1P53384 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
NUBP1P53384 CFAP47-201ENST00000297866 3608 ntTSL 2 BASIC6.73□□□□□ -1.33
NUBP1P53384 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
NUBP1P53384 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
NUBP1P53384 AP000547.3-204ENST00000588548 2523 ntBASIC6.73□□□□□ -1.33
NUBP1P53384 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
NUBP1P53384 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NUBP1P53384 Y_RNA.179-201ENST00000363844 90 ntBASIC6.73□□□□□ -1.33
NUBP1P53384 Y_RNA.293-201ENST00000364908 93 ntBASIC6.73□□□□□ -1.33
NUBP1P53384 Y_RNA.525-201ENST00000384570 113 ntBASIC6.73□□□□□ -1.33
NUBP1P53384 RN7SKP293-201ENST00000411389 296 ntBASIC6.73□□□□□ -1.33
NUBP1P53384 Z85995.1-201ENST00000415547 335 ntBASIC6.73□□□□□ -1.33
NUBP1P53384 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC6.73□□□□□ -1.33
NUBP1P53384 RPL23AP95-201ENST00000426806 265 ntBASIC6.73□□□□□ -1.33
NUBP1P53384 AL356867.1-201ENST00000429623 299 ntBASIC6.73□□□□□ -1.33
NUBP1P53384 GPM6BP3-201ENST00000442797 145 ntBASIC6.73□□□□□ -1.33
NUBP1P53384 COX4I1P2-201ENST00000447446 547 ntBASIC6.73□□□□□ -1.33
NUBP1P53384 AL121914.1-201ENST00000450188 156 ntBASIC6.73□□□□□ -1.33
NUBP1P53384 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.73□□□□□ -1.33
NUBP1P53384 RPL23AP40-201ENST00000487630 390 ntBASIC6.73□□□□□ -1.33
NUBP1P53384 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.73□□□□□ -1.33
NUBP1P53384 AL136038.1-201ENST00000497246 351 ntBASIC6.73□□□□□ -1.33
NUBP1P53384 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.73□□□□□ -1.33
NUBP1P53384 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC6.73□□□□□ -1.33
NUBP1P53384 MIR3135A-201ENST00000578460 77 ntBASIC6.73□□□□□ -1.33
NUBP1P53384 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
NUBP1P53384 MIR4701-201ENST00000583094 63 ntBASIC6.73□□□□□ -1.33
NUBP1P53384 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC6.73□□□□□ -1.33
NUBP1P53384 AC013791.1-201ENST00000616619 62 ntBASIC6.73□□□□□ -1.33
NUBP1P53384 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC6.73□□□□□ -1.33
NUBP1P53384 MESTIT1_1.1-201ENST00000618871 140 ntBASIC6.73□□□□□ -1.33
NUBP1P53384 FAM27E2-201ENST00000619668 403 ntBASIC6.73□□□□□ -1.33
NUBP1P53384 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC6.73□□□□□ -1.33
NUBP1P53384 AC068647.2-201ENST00000637380 353 ntBASIC6.73□□□□□ -1.33
NUBP1P53384 U6.99-201ENST00000637524 83 ntBASIC6.73□□□□□ -1.33
NUBP1P53384 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NUBP1P53384 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC6.73□□□□□ -1.33
NUBP1P53384 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC6.73□□□□□ -1.33
NUBP1P53384 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NUBP1P53384 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
NUBP1P53384 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NUBP1P53384 AC006058.1-201ENST00000568686 5067 ntBASIC6.73□□□□□ -1.33
NUBP1P53384 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.73□□□□□ -1.33
NUBP1P53384 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NUBP1P53384 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.73□□□□□ -1.33
NUBP1P53384 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC6.73□□□□□ -1.33
NUBP1P53384 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NUBP1P53384 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC6.73□□□□□ -1.33
NUBP1P53384 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
NUBP1P53384 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC6.73□□□□□ -1.33
NUBP1P53384 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NUBP1P53384 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
NUBP1P53384 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NUBP1P53384 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
NUBP1P53384 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
NUBP1P53384 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
NUBP1P53384 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
NUBP1P53384 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
NUBP1P53384 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
NUBP1P53384 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC6.72□□□□□ -1.33
NUBP1P53384 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC6.72□□□□□ -1.33
NUBP1P53384 ANKS1B-211ENST00000547776 3885 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
NUBP1P53384 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
NUBP1P53384 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.72□□□□□ -1.33
NUBP1P53384 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
NUBP1P53384 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
NUBP1P53384 CTH-202ENST00000370938 1805 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
NUBP1P53384 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.72□□□□□ -1.33
NUBP1P53384 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
NUBP1P53384 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
NUBP1P53384 Y_RNA.329-201ENST00000365209 107 ntBASIC6.72□□□□□ -1.33
NUBP1P53384 Y_RNA.369-201ENST00000365568 117 ntBASIC6.72□□□□□ -1.33
NUBP1P53384 MIR487A-201ENST00000385009 80 ntBASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 265.7 ms