Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
AP4S1Q9Y587 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.94□□□□□ -2.1
AP4S1Q9Y587 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
AP4S1Q9Y587 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.93□□□□□ -2.1
AP4S1Q9Y587 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
AP4S1Q9Y587 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.93□□□□□ -2.1
AP4S1Q9Y587 RNA5SP391-201ENST00000363456 119 ntBASIC1.93□□□□□ -2.1
AP4S1Q9Y587 MIR670-201ENST00000390142 98 ntBASIC1.93□□□□□ -2.1
AP4S1Q9Y587 SSR1P1-201ENST00000407630 814 ntBASIC1.93□□□□□ -2.1
AP4S1Q9Y587 RNA5SP489-201ENST00000410986 109 ntBASIC1.93□□□□□ -2.1
AP4S1Q9Y587 AL030996.1-201ENST00000411430 235 ntBASIC1.93□□□□□ -2.1
AP4S1Q9Y587 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.93□□□□□ -2.1
AP4S1Q9Y587 AL606495.1-201ENST00000422100 813 ntBASIC1.93□□□□□ -2.1
AP4S1Q9Y587 PTP4A1P7-201ENST00000423476 514 ntBASIC1.93□□□□□ -2.1
AP4S1Q9Y587 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.93□□□□□ -2.1
AP4S1Q9Y587 AC023347.2-201ENST00000433994 462 ntBASIC1.93□□□□□ -2.1
AP4S1Q9Y587 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
AP4S1Q9Y587 MTND3P6-201ENST00000485242 339 ntBASIC1.93□□□□□ -2.1
AP4S1Q9Y587 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC1.93□□□□□ -2.1
AP4S1Q9Y587 MIR514B-201ENST00000516774 80 ntBASIC1.93□□□□□ -2.1
AP4S1Q9Y587 NDUFS5P6-201ENST00000529136 295 ntBASIC1.93□□□□□ -2.1
AP4S1Q9Y587 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC1.93□□□□□ -2.1
AP4S1Q9Y587 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.93□□□□□ -2.1
AP4S1Q9Y587 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC1.93□□□□□ -2.1
AP4S1Q9Y587 AL138976.2-201ENST00000563989 694 ntBASIC1.93□□□□□ -2.1
AP4S1Q9Y587 AC245036.5-201ENST00000596330 847 ntBASIC1.93□□□□□ -2.1
AP4S1Q9Y587 AC012493.3-201ENST00000604494 112 ntBASIC1.93□□□□□ -2.1
AP4S1Q9Y587 CU459211.1-201ENST00000635667 749 ntBASIC1.93□□□□□ -2.1
AP4S1Q9Y587 MIR4496-201ENST00000635896 61 ntBASIC1.93□□□□□ -2.1
AP4S1Q9Y587 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC1.93□□□□□ -2.1
AP4S1Q9Y587 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
AP4S1Q9Y587 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
AP4S1Q9Y587 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC1.92□□□□□ -2.1
AP4S1Q9Y587 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
AP4S1Q9Y587 MIR524-201ENST00000385242 87 ntBASIC1.92□□□□□ -2.1
AP4S1Q9Y587 NDUFB4P4-201ENST00000404822 243 ntBASIC1.92□□□□□ -2.1
AP4S1Q9Y587 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.92□□□□□ -2.1
AP4S1Q9Y587 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC1.92□□□□□ -2.1
AP4S1Q9Y587 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
AP4S1Q9Y587 RPS7P2-201ENST00000435134 607 ntBASIC1.92□□□□□ -2.1
AP4S1Q9Y587 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.92□□□□□ -2.1
AP4S1Q9Y587 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.92□□□□□ -2.1
AP4S1Q9Y587 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC1.92□□□□□ -2.1
AP4S1Q9Y587 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
AP4S1Q9Y587 AC114322.1-201ENST00000506771 926 ntBASIC1.92□□□□□ -2.1
AP4S1Q9Y587 FABP5P6-201ENST00000510588 409 ntBASIC1.92□□□□□ -2.1
AP4S1Q9Y587 AC026801.2-201ENST00000515352 425 ntBASIC1.92□□□□□ -2.1
AP4S1Q9Y587 RNA5SP281-201ENST00000516504 135 ntBASIC1.92□□□□□ -2.1
AP4S1Q9Y587 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC1.92□□□□□ -2.1
AP4S1Q9Y587 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC1.92□□□□□ -2.1
AP4S1Q9Y587 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC1.92□□□□□ -2.1
AP4S1Q9Y587 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.92□□□□□ -2.1
AP4S1Q9Y587 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.92□□□□□ -2.1
AP4S1Q9Y587 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
AP4S1Q9Y587 MTCO1P40-201ENST00000574371 625 ntBASIC1.92□□□□□ -2.1
AP4S1Q9Y587 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC1.92□□□□□ -2.1
AP4S1Q9Y587 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
AP4S1Q9Y587 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.92□□□□□ -2.1
AP4S1Q9Y587 MIR203B-201ENST00000636080 86 ntBASIC1.92□□□□□ -2.1
AP4S1Q9Y587 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.92□□□□□ -2.1
AP4S1Q9Y587 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
AP4S1Q9Y587 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
AP4S1Q9Y587 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC1.91□□□□□ -2.1
AP4S1Q9Y587 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC1.91□□□□□ -2.1
AP4S1Q9Y587 AC062016.1-201ENST00000355719 319 ntBASIC1.91□□□□□ -2.1
AP4S1Q9Y587 TAS2R15P-201ENST00000390674 928 ntBASIC1.91□□□□□ -2.1
AP4S1Q9Y587 AL355497.1-201ENST00000406262 551 ntBASIC1.91□□□□□ -2.1
AP4S1Q9Y587 AL356967.1-201ENST00000406305 431 ntBASIC1.91□□□□□ -2.1
AP4S1Q9Y587 RNU4-72P-201ENST00000410754 173 ntBASIC1.91□□□□□ -2.1
AP4S1Q9Y587 AL513331.1-201ENST00000411908 397 ntBASIC1.91□□□□□ -2.1
AP4S1Q9Y587 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
AP4S1Q9Y587 AC114973.1-201ENST00000429057 632 ntBASIC1.91□□□□□ -2.1
AP4S1Q9Y587 UBE2FP3-201ENST00000436366 524 ntBASIC1.91□□□□□ -2.1
AP4S1Q9Y587 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.91□□□□□ -2.1
AP4S1Q9Y587 RPS24P6-201ENST00000452670 400 ntBASIC1.91□□□□□ -2.1
AP4S1Q9Y587 RPL23AP70-201ENST00000483361 460 ntBASIC1.91□□□□□ -2.1
AP4S1Q9Y587 AC090453.1-201ENST00000495560 436 ntBASIC1.91□□□□□ -2.1
AP4S1Q9Y587 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
AP4S1Q9Y587 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC1.91□□□□□ -2.1
AP4S1Q9Y587 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.91□□□□□ -2.1
AP4S1Q9Y587 AP004371.1-201ENST00000525240 214 ntBASIC1.91□□□□□ -2.1
AP4S1Q9Y587 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC1.91□□□□□ -2.1
AP4S1Q9Y587 AC027176.1-201ENST00000560204 514 ntBASIC1.91□□□□□ -2.1
AP4S1Q9Y587 HMGB1P6-201ENST00000569046 646 ntBASIC1.91□□□□□ -2.1
AP4S1Q9Y587 MIR5195-201ENST00000583555 115 ntBASIC1.91□□□□□ -2.1
AP4S1Q9Y587 RPS15AP11-201ENST00000594193 385 ntBASIC1.91□□□□□ -2.1
AP4S1Q9Y587 AL590099.1-201ENST00000615276 138 ntBASIC1.91□□□□□ -2.1
AP4S1Q9Y587 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC1.91□□□□□ -2.1
AP4S1Q9Y587 PCNP-208ENST00000627393 136 ntTSL 2 BASIC1.91□□□□□ -2.1
AP4S1Q9Y587 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.91□□□□□ -2.1
AP4S1Q9Y587 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC1.91□□□□□ -2.1
AP4S1Q9Y587 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.91□□□□□ -2.1
AP4S1Q9Y587 AC099654.7-201ENST00000635788 2127 ntBASIC1.9□□□□□ -2.1
AP4S1Q9Y587 SET-203ENST00000372688 801 ntTSL 2 BASIC1.9□□□□□ -2.11
AP4S1Q9Y587 RNU6-532P-201ENST00000384318 107 ntBASIC1.9□□□□□ -2.11
AP4S1Q9Y587 RNU6-1072P-201ENST00000384703 107 ntBASIC1.9□□□□□ -2.11
AP4S1Q9Y587 RNU6-443P-201ENST00000384780 107 ntBASIC1.9□□□□□ -2.11
AP4S1Q9Y587 RNU6ATAC34P-201ENST00000408879 121 ntBASIC1.9□□□□□ -2.11
AP4S1Q9Y587 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC1.9□□□□□ -2.11
AP4S1Q9Y587 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms