Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.54□□□□□ -1.84
VPS33AQ96AX1 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.54□□□□□ -1.84
VPS33AQ96AX1 AL031281.1-201ENST00000604049 488 ntBASIC3.54□□□□□ -1.84
VPS33AQ96AX1 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.54□□□□□ -1.84
VPS33AQ96AX1 AC068831.7-201ENST00000616954 363 ntBASIC3.54□□□□□ -1.84
VPS33AQ96AX1 AC002076.2-201ENST00000617362 122 ntBASIC3.54□□□□□ -1.84
VPS33AQ96AX1 MIR6500-201ENST00000622700 86 ntBASIC3.54□□□□□ -1.84
VPS33AQ96AX1 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.54□□□□□ -1.84
VPS33AQ96AX1 AC009039.2-201ENST00000624524 529 ntBASIC3.54□□□□□ -1.84
VPS33AQ96AX1 MIR492-201ENST00000638676 116 ntBASIC3.54□□□□□ -1.84
VPS33AQ96AX1 AC092326.2-201ENST00000624772 1561 ntBASIC3.54□□□□□ -1.84
VPS33AQ96AX1 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VPS33AQ96AX1 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VPS33AQ96AX1 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
VPS33AQ96AX1 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VPS33AQ96AX1 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VPS33AQ96AX1 AP000526.1-201ENST00000603308 1388 ntBASIC3.53□□□□□ -1.84
VPS33AQ96AX1 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
VPS33AQ96AX1 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.53□□□□□ -1.84
VPS33AQ96AX1 RNU6-1078P-201ENST00000364522 103 ntBASIC3.53□□□□□ -1.84
VPS33AQ96AX1 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.53□□□□□ -1.84
VPS33AQ96AX1 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VPS33AQ96AX1 RNU6-76P-201ENST00000384060 104 ntBASIC3.53□□□□□ -1.84
VPS33AQ96AX1 MIR493-201ENST00000385254 89 ntBASIC3.53□□□□□ -1.84
VPS33AQ96AX1 MIR937-201ENST00000401271 86 ntBASIC3.53□□□□□ -1.84
VPS33AQ96AX1 RNA5SP317-201ENST00000410176 116 ntBASIC3.53□□□□□ -1.84
VPS33AQ96AX1 RNA5SP311-201ENST00000411290 116 ntBASIC3.53□□□□□ -1.84
VPS33AQ96AX1 RPL36AP36-201ENST00000418616 301 ntBASIC3.53□□□□□ -1.84
VPS33AQ96AX1 RPL31P12-201ENST00000422587 358 ntBASIC3.53□□□□□ -1.84
VPS33AQ96AX1 MTCO2P17-201ENST00000424336 677 ntBASIC3.53□□□□□ -1.84
VPS33AQ96AX1 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.53□□□□□ -1.84
VPS33AQ96AX1 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.53□□□□□ -1.84
VPS33AQ96AX1 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.53□□□□□ -1.84
VPS33AQ96AX1 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.53□□□□□ -1.84
VPS33AQ96AX1 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.53□□□□□ -1.84
VPS33AQ96AX1 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.53□□□□□ -1.84
VPS33AQ96AX1 RPL7P19-201ENST00000469948 618 ntBASIC3.53□□□□□ -1.84
VPS33AQ96AX1 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.53□□□□□ -1.84
VPS33AQ96AX1 AC109464.2-201ENST00000510242 943 ntBASIC3.53□□□□□ -1.84
VPS33AQ96AX1 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.53□□□□□ -1.84
VPS33AQ96AX1 PHBP14-201ENST00000512887 367 ntBASIC3.53□□□□□ -1.84
VPS33AQ96AX1 RNA5SP315-201ENST00000516340 116 ntBASIC3.53□□□□□ -1.84
VPS33AQ96AX1 RNA5SP164-201ENST00000516533 110 ntBASIC3.53□□□□□ -1.84
VPS33AQ96AX1 RNA5SP312-201ENST00000517068 116 ntBASIC3.53□□□□□ -1.84
VPS33AQ96AX1 CDH12P4-201ENST00000517835 295 ntBASIC3.53□□□□□ -1.84
VPS33AQ96AX1 CDH12P3-201ENST00000517935 295 ntBASIC3.53□□□□□ -1.84
VPS33AQ96AX1 CDH12P1-201ENST00000518435 295 ntBASIC3.53□□□□□ -1.84
VPS33AQ96AX1 MRPS36P3-201ENST00000519284 130 ntBASIC3.53□□□□□ -1.84
VPS33AQ96AX1 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VPS33AQ96AX1 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.53□□□□□ -1.84
VPS33AQ96AX1 AL121766.1-201ENST00000547436 487 ntBASIC3.53□□□□□ -1.84
VPS33AQ96AX1 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.53□□□□□ -1.84
VPS33AQ96AX1 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.53□□□□□ -1.84
VPS33AQ96AX1 AC009097.3-201ENST00000563557 1018 ntBASIC3.53□□□□□ -1.84
VPS33AQ96AX1 MIR4284-201ENST00000578924 81 ntBASIC3.53□□□□□ -1.84
VPS33AQ96AX1 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.53□□□□□ -1.84
VPS33AQ96AX1 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.53□□□□□ -1.84
VPS33AQ96AX1 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.53□□□□□ -1.84
VPS33AQ96AX1 AC112484.5-201ENST00000624189 228 ntBASIC3.53□□□□□ -1.84
VPS33AQ96AX1 AC103706.2-201ENST00000638080 240 ntBASIC3.53□□□□□ -1.84
VPS33AQ96AX1 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
VPS33AQ96AX1 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.53□□□□□ -1.84
VPS33AQ96AX1 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.53□□□□□ -1.84
VPS33AQ96AX1 SDAD1P2-201ENST00000441308 2028 ntBASIC3.53□□□□□ -1.84
VPS33AQ96AX1 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.53□□□□□ -1.84
VPS33AQ96AX1 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
VPS33AQ96AX1 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
VPS33AQ96AX1 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
VPS33AQ96AX1 AC008568.2-201ENST00000623862 2313 ntBASIC3.52□□□□□ -1.85
VPS33AQ96AX1 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.52□□□□□ -1.85
VPS33AQ96AX1 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
VPS33AQ96AX1 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
VPS33AQ96AX1 RPS26P8-201ENST00000393490 348 ntBASIC3.52□□□□□ -1.85
VPS33AQ96AX1 RSL24D1P4-201ENST00000400938 484 ntBASIC3.52□□□□□ -1.85
VPS33AQ96AX1 PPIAP31-201ENST00000405422 495 ntBASIC3.52□□□□□ -1.85
VPS33AQ96AX1 BX119904.4-201ENST00000424402 301 ntBASIC3.52□□□□□ -1.85
VPS33AQ96AX1 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.52□□□□□ -1.85
VPS33AQ96AX1 YWHAZP7-201ENST00000436906 631 ntBASIC3.52□□□□□ -1.85
VPS33AQ96AX1 AC112653.1-201ENST00000443851 386 ntBASIC3.52□□□□□ -1.85
VPS33AQ96AX1 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.52□□□□□ -1.85
VPS33AQ96AX1 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.52□□□□□ -1.85
VPS33AQ96AX1 AC099563.1-201ENST00000456086 418 ntBASIC3.52□□□□□ -1.85
VPS33AQ96AX1 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.52□□□□□ -1.85
VPS33AQ96AX1 AC006463.2-201ENST00000473326 348 ntBASIC3.52□□□□□ -1.85
VPS33AQ96AX1 AC034222.1-201ENST00000494052 532 ntBASIC3.52□□□□□ -1.85
VPS33AQ96AX1 AC104685.1-201ENST00000502445 371 ntBASIC3.52□□□□□ -1.85
VPS33AQ96AX1 FTH1P21-201ENST00000512179 511 ntBASIC3.52□□□□□ -1.85
VPS33AQ96AX1 MTCYBP43-201ENST00000513621 740 ntBASIC3.52□□□□□ -1.85
VPS33AQ96AX1 RPL12P22-201ENST00000519073 490 ntBASIC3.52□□□□□ -1.85
VPS33AQ96AX1 RAB9BP1-201ENST00000519581 626 ntBASIC3.52□□□□□ -1.85
VPS33AQ96AX1 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.52□□□□□ -1.85
VPS33AQ96AX1 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.52□□□□□ -1.85
VPS33AQ96AX1 AL163153.1-201ENST00000554223 283 ntBASIC3.52□□□□□ -1.85
VPS33AQ96AX1 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.52□□□□□ -1.85
VPS33AQ96AX1 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.52□□□□□ -1.85
VPS33AQ96AX1 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.52□□□□□ -1.85
VPS33AQ96AX1 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.52□□□□□ -1.85
VPS33AQ96AX1 AC008962.1-201ENST00000605729 304 ntBASIC3.52□□□□□ -1.85
VPS33AQ96AX1 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.52□□□□□ -1.85
VPS33AQ96AX1 AP000254.1-201ENST00000609934 520 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms