Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.65□□□□□ -1.83
BEST3Q8N1M1 FABP3P2-201ENST00000453169 399 ntBASIC3.65□□□□□ -1.83
BEST3Q8N1M1 SNRPFP4-201ENST00000456366 242 ntBASIC3.65□□□□□ -1.83
BEST3Q8N1M1 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.65□□□□□ -1.83
BEST3Q8N1M1 HMGB1P25-201ENST00000468402 607 ntBASIC3.65□□□□□ -1.83
BEST3Q8N1M1 ST13P14-201ENST00000474095 734 ntBASIC3.65□□□□□ -1.83
BEST3Q8N1M1 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.65□□□□□ -1.83
BEST3Q8N1M1 RN7SL323P-201ENST00000494712 295 ntBASIC3.65□□□□□ -1.83
BEST3Q8N1M1 AC012170.1-201ENST00000495139 359 ntBASIC3.65□□□□□ -1.83
BEST3Q8N1M1 AP002812.1-201ENST00000495378 474 ntBASIC3.65□□□□□ -1.83
BEST3Q8N1M1 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.65□□□□□ -1.83
BEST3Q8N1M1 MTCO3P7-201ENST00000510008 774 ntBASIC3.65□□□□□ -1.83
BEST3Q8N1M1 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.65□□□□□ -1.83
BEST3Q8N1M1 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.65□□□□□ -1.83
BEST3Q8N1M1 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.65□□□□□ -1.83
BEST3Q8N1M1 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.65□□□□□ -1.83
BEST3Q8N1M1 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.65□□□□□ -1.83
BEST3Q8N1M1 MTND3P5-201ENST00000512798 333 ntBASIC3.65□□□□□ -1.83
BEST3Q8N1M1 RNU6-714P-201ENST00000516963 103 ntBASIC3.65□□□□□ -1.83
BEST3Q8N1M1 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.65□□□□□ -1.83
BEST3Q8N1M1 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.65□□□□□ -1.83
BEST3Q8N1M1 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.65□□□□□ -1.83
BEST3Q8N1M1 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.65□□□□□ -1.83
BEST3Q8N1M1 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.65□□□□□ -1.83
BEST3Q8N1M1 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.65□□□□□ -1.83
BEST3Q8N1M1 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.65□□□□□ -1.83
BEST3Q8N1M1 AC007599.1-201ENST00000568688 1174 ntBASIC3.65□□□□□ -1.83
BEST3Q8N1M1 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.65□□□□□ -1.83
BEST3Q8N1M1 TPMTP1-201ENST00000592307 737 ntBASIC3.65□□□□□ -1.83
BEST3Q8N1M1 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.65□□□□□ -1.83
BEST3Q8N1M1 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
BEST3Q8N1M1 AL365503.1-201ENST00000605247 905 ntBASIC3.65□□□□□ -1.83
BEST3Q8N1M1 AC055876.5-201ENST00000605667 259 ntBASIC3.65□□□□□ -1.83
BEST3Q8N1M1 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.65□□□□□ -1.83
BEST3Q8N1M1 HULC.1-201ENST00000612720 240 ntBASIC3.65□□□□□ -1.83
BEST3Q8N1M1 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.65□□□□□ -1.83
BEST3Q8N1M1 FP236240.3-201ENST00000623061 327 ntBASIC3.65□□□□□ -1.83
BEST3Q8N1M1 FAM35DP-201ENST00000323387 2712 ntBASIC3.65□□□□□ -1.83
BEST3Q8N1M1 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
BEST3Q8N1M1 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
BEST3Q8N1M1 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
BEST3Q8N1M1 MAPK10-373ENST00000641983 6772 ntBASIC3.65□□□□□ -1.83
BEST3Q8N1M1 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
BEST3Q8N1M1 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
BEST3Q8N1M1 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
BEST3Q8N1M1 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.64□□□□□ -1.83
BEST3Q8N1M1 RNU6-853P-201ENST00000364306 107 ntBASIC3.64□□□□□ -1.83
BEST3Q8N1M1 RNA5SP97-201ENST00000365006 84 ntBASIC3.64□□□□□ -1.83
BEST3Q8N1M1 RNU6-359P-201ENST00000365466 108 ntBASIC3.64□□□□□ -1.83
BEST3Q8N1M1 RNU6-1207P-201ENST00000384343 107 ntBASIC3.64□□□□□ -1.83
BEST3Q8N1M1 MIR1251-201ENST00000408552 70 ntBASIC3.64□□□□□ -1.83
BEST3Q8N1M1 SNORA3C-201ENST00000408792 125 ntBASIC3.64□□□□□ -1.83
BEST3Q8N1M1 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
BEST3Q8N1M1 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.64□□□□□ -1.83
BEST3Q8N1M1 AL513174.1-201ENST00000423182 629 ntBASIC3.64□□□□□ -1.83
BEST3Q8N1M1 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.64□□□□□ -1.83
BEST3Q8N1M1 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
BEST3Q8N1M1 RWDD4P2-201ENST00000426392 563 ntBASIC3.64□□□□□ -1.83
BEST3Q8N1M1 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.64□□□□□ -1.83
BEST3Q8N1M1 AL353706.1-201ENST00000436728 494 ntBASIC3.64□□□□□ -1.83
BEST3Q8N1M1 GDI2P2-201ENST00000445131 608 ntBASIC3.64□□□□□ -1.83
BEST3Q8N1M1 AL592447.1-201ENST00000447592 540 ntBASIC3.64□□□□□ -1.83
BEST3Q8N1M1 DNAJC19P1-201ENST00000455312 319 ntBASIC3.64□□□□□ -1.83
BEST3Q8N1M1 BTF3P5-201ENST00000457252 467 ntBASIC3.64□□□□□ -1.83
BEST3Q8N1M1 TPTE2P5-203ENST00000458118 728 ntBASIC3.64□□□□□ -1.83
BEST3Q8N1M1 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
BEST3Q8N1M1 AC069499.1-201ENST00000489433 509 ntBASIC3.64□□□□□ -1.83
BEST3Q8N1M1 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.64□□□□□ -1.83
BEST3Q8N1M1 AF131216.2-201ENST00000512316 564 ntBASIC3.64□□□□□ -1.83
BEST3Q8N1M1 FABP5P5-201ENST00000515537 406 ntBASIC3.64□□□□□ -1.83
BEST3Q8N1M1 RNU6-352P-201ENST00000516908 107 ntBASIC3.64□□□□□ -1.83
BEST3Q8N1M1 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.64□□□□□ -1.83
BEST3Q8N1M1 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.64□□□□□ -1.83
BEST3Q8N1M1 MTND4LP18-201ENST00000526864 291 ntBASIC3.64□□□□□ -1.83
BEST3Q8N1M1 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.64□□□□□ -1.83
BEST3Q8N1M1 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.64□□□□□ -1.83
BEST3Q8N1M1 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.64□□□□□ -1.83
BEST3Q8N1M1 YPEL5P3-201ENST00000547227 352 ntBASIC3.64□□□□□ -1.83
BEST3Q8N1M1 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.64□□□□□ -1.83
BEST3Q8N1M1 SETP7-201ENST00000552169 453 ntBASIC3.64□□□□□ -1.83
BEST3Q8N1M1 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.64□□□□□ -1.83
BEST3Q8N1M1 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.64□□□□□ -1.83
BEST3Q8N1M1 AC006362.1-201ENST00000567392 174 ntBASIC3.64□□□□□ -1.83
BEST3Q8N1M1 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.64□□□□□ -1.83
BEST3Q8N1M1 AC103987.3-201ENST00000582071 292 ntBASIC3.64□□□□□ -1.83
BEST3Q8N1M1 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.64□□□□□ -1.83
BEST3Q8N1M1 AC091965.4-201ENST00000607691 587 ntBASIC3.64□□□□□ -1.83
BEST3Q8N1M1 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.64□□□□□ -1.83
BEST3Q8N1M1 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.64□□□□□ -1.83
BEST3Q8N1M1 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
BEST3Q8N1M1 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
BEST3Q8N1M1 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
BEST3Q8N1M1 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
BEST3Q8N1M1 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
BEST3Q8N1M1 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
BEST3Q8N1M1 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
BEST3Q8N1M1 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
BEST3Q8N1M1 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
BEST3Q8N1M1 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.63□□□□□ -1.83
BEST3Q8N1M1 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms