Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.99□□□□□ -1.45
RNF135Q8IUD6 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RNF135Q8IUD6 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
RNF135Q8IUD6 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.99□□□□□ -1.45
RNF135Q8IUD6 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
RNF135Q8IUD6 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.99□□□□□ -1.45
RNF135Q8IUD6 PHKBP1-201ENST00000450951 1951 ntBASIC5.99□□□□□ -1.45
RNF135Q8IUD6 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
RNF135Q8IUD6 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RNF135Q8IUD6 SNORD62.1-201ENST00000362541 86 ntBASIC5.99□□□□□ -1.45
RNF135Q8IUD6 RNA5SP305-201ENST00000362665 119 ntBASIC5.99□□□□□ -1.45
RNF135Q8IUD6 Y_RNA.493-201ENST00000384422 102 ntBASIC5.99□□□□□ -1.45
RNF135Q8IUD6 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
RNF135Q8IUD6 RNU1-77P-201ENST00000390868 162 ntBASIC5.99□□□□□ -1.45
RNF135Q8IUD6 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.99□□□□□ -1.45
RNF135Q8IUD6 RPL12P34-201ENST00000424532 479 ntBASIC5.99□□□□□ -1.45
RNF135Q8IUD6 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.99□□□□□ -1.45
RNF135Q8IUD6 MRPS18BP2-201ENST00000434310 759 ntBASIC5.99□□□□□ -1.45
RNF135Q8IUD6 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC5.99□□□□□ -1.45
RNF135Q8IUD6 RPS11P7-201ENST00000442125 465 ntBASIC5.99□□□□□ -1.45
RNF135Q8IUD6 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.99□□□□□ -1.45
RNF135Q8IUD6 HSFY6P-201ENST00000445573 403 ntBASIC5.99□□□□□ -1.45
RNF135Q8IUD6 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC5.99□□□□□ -1.45
RNF135Q8IUD6 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.99□□□□□ -1.45
RNF135Q8IUD6 SNORD5.1-201ENST00000458800 75 ntBASIC5.99□□□□□ -1.45
RNF135Q8IUD6 HMGB1P25-201ENST00000468402 607 ntBASIC5.99□□□□□ -1.45
RNF135Q8IUD6 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.99□□□□□ -1.45
RNF135Q8IUD6 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC5.99□□□□□ -1.45
RNF135Q8IUD6 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC5.99□□□□□ -1.45
RNF135Q8IUD6 SCARNA16.2-201ENST00000516520 172 ntBASIC5.99□□□□□ -1.45
RNF135Q8IUD6 AC021678.3-201ENST00000517893 476 ntBASIC5.99□□□□□ -1.45
RNF135Q8IUD6 CYCSP27-201ENST00000527643 293 ntBASIC5.99□□□□□ -1.45
RNF135Q8IUD6 RRN3P3-201ENST00000549207 578 ntBASIC5.99□□□□□ -1.45
RNF135Q8IUD6 AC026371.1-201ENST00000551867 419 ntBASIC5.99□□□□□ -1.45
RNF135Q8IUD6 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.99□□□□□ -1.45
RNF135Q8IUD6 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.99□□□□□ -1.45
RNF135Q8IUD6 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.99□□□□□ -1.45
RNF135Q8IUD6 MIR4480-201ENST00000582492 71 ntBASIC5.99□□□□□ -1.45
RNF135Q8IUD6 AC126915.2-201ENST00000610957 190 ntBASIC5.99□□□□□ -1.45
RNF135Q8IUD6 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.99□□□□□ -1.45
RNF135Q8IUD6 AC132068.1-201ENST00000623805 459 ntBASIC5.99□□□□□ -1.45
RNF135Q8IUD6 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.99□□□□□ -1.45
RNF135Q8IUD6 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.99□□□□□ -1.45
RNF135Q8IUD6 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RNF135Q8IUD6 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
RNF135Q8IUD6 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.99□□□□□ -1.45
RNF135Q8IUD6 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RNF135Q8IUD6 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RNF135Q8IUD6 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.98□□□□□ -1.45
RNF135Q8IUD6 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
RNF135Q8IUD6 THAP12P9-201ENST00000503971 2360 ntBASIC5.98□□□□□ -1.45
RNF135Q8IUD6 AL121839.2-201ENST00000565058 6943 ntBASIC5.98□□□□□ -1.45
RNF135Q8IUD6 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.98□□□□□ -1.45
RNF135Q8IUD6 RNU6-989P-201ENST00000362756 107 ntBASIC5.98□□□□□ -1.45
RNF135Q8IUD6 SNORD1C-201ENST00000363315 78 ntBASIC5.98□□□□□ -1.45
RNF135Q8IUD6 RNU6-266P-201ENST00000364225 107 ntBASIC5.98□□□□□ -1.45
RNF135Q8IUD6 Y_RNA.288-201ENST00000364854 92 ntBASIC5.98□□□□□ -1.45
RNF135Q8IUD6 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RNF135Q8IUD6 MYL6P5-201ENST00000412707 459 ntBASIC5.98□□□□□ -1.45
RNF135Q8IUD6 RPS23P10-201ENST00000416185 486 ntBASIC5.98□□□□□ -1.45
RNF135Q8IUD6 CYCSP10-201ENST00000417973 294 ntBASIC5.98□□□□□ -1.45
RNF135Q8IUD6 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.98□□□□□ -1.45
RNF135Q8IUD6 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC5.98□□□□□ -1.45
RNF135Q8IUD6 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.98□□□□□ -1.45
RNF135Q8IUD6 RPL23AP33-201ENST00000442301 452 ntBASIC5.98□□□□□ -1.45
RNF135Q8IUD6 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.98□□□□□ -1.45
RNF135Q8IUD6 AC002553.2-201ENST00000453217 340 ntBASIC5.98□□□□□ -1.45
RNF135Q8IUD6 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.98□□□□□ -1.45
RNF135Q8IUD6 AC087884.1-201ENST00000469738 328 ntBASIC5.98□□□□□ -1.45
RNF135Q8IUD6 AC090686.1-201ENST00000481577 749 ntBASIC5.98□□□□□ -1.45
RNF135Q8IUD6 RPL32P33-201ENST00000487023 394 ntBASIC5.98□□□□□ -1.45
RNF135Q8IUD6 RNU6-307P-201ENST00000516743 106 ntBASIC5.98□□□□□ -1.45
RNF135Q8IUD6 RN7SKP82-201ENST00000516786 223 ntBASIC5.98□□□□□ -1.45
RNF135Q8IUD6 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RNF135Q8IUD6 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.98□□□□□ -1.45
RNF135Q8IUD6 MIR4716-201ENST00000579628 84 ntBASIC5.98□□□□□ -1.45
RNF135Q8IUD6 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.98□□□□□ -1.45
RNF135Q8IUD6 AC092447.9-201ENST00000603395 144 ntBASIC5.98□□□□□ -1.45
RNF135Q8IUD6 AL118522.2-201ENST00000616045 615 ntBASIC5.98□□□□□ -1.45
RNF135Q8IUD6 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.98□□□□□ -1.45
RNF135Q8IUD6 MPP6-209ENST00000625307 126 ntTSL 5 BASIC5.98□□□□□ -1.45
RNF135Q8IUD6 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.98□□□□□ -1.45
RNF135Q8IUD6 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.98□□□□□ -1.45
RNF135Q8IUD6 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.98□□□□□ -1.45
RNF135Q8IUD6 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
RNF135Q8IUD6 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RNF135Q8IUD6 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.98□□□□□ -1.45
RNF135Q8IUD6 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RNF135Q8IUD6 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RNF135Q8IUD6 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RNF135Q8IUD6 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RNF135Q8IUD6 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
RNF135Q8IUD6 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RNF135Q8IUD6 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RNF135Q8IUD6 AC019155.1-201ENST00000382242 574 ntBASIC5.97□□□□□ -1.45
RNF135Q8IUD6 RNU6-306P-201ENST00000384617 107 ntBASIC5.97□□□□□ -1.45
RNF135Q8IUD6 RNU6-178P-201ENST00000384631 104 ntBASIC5.97□□□□□ -1.45
RNF135Q8IUD6 RNU6-821P-201ENST00000390995 107 ntBASIC5.97□□□□□ -1.45
RNF135Q8IUD6 RNU6-101P-201ENST00000410323 104 ntBASIC5.97□□□□□ -1.45
RNF135Q8IUD6 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms