Protein–RNA interactions for Protein: Q05682

CALD1, Caldesmon, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1Q05682 MIR622-201ENST00000638396 96 ntBASIC4.15□□□□□ -1.75
CALD1Q05682 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
CALD1Q05682 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CALD1Q05682 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
CALD1Q05682 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.15□□□□□ -1.75
CALD1Q05682 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CALD1Q05682 AC107982.1-201ENST00000507171 1300 ntBASIC4.15□□□□□ -1.75
CALD1Q05682 MTCO1P23-201ENST00000415223 1526 ntBASIC4.15□□□□□ -1.75
CALD1Q05682 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CALD1Q05682 RNU6-1249P-201ENST00000363237 111 ntBASIC4.14□□□□□ -1.75
CALD1Q05682 SNORA70.4-201ENST00000365509 134 ntBASIC4.14□□□□□ -1.75
CALD1Q05682 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CALD1Q05682 AL450338.1-201ENST00000407987 512 ntBASIC4.14□□□□□ -1.75
CALD1Q05682 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.14□□□□□ -1.75
CALD1Q05682 MTCO2P23-201ENST00000425216 680 ntBASIC4.14□□□□□ -1.75
CALD1Q05682 FTH1P1-201ENST00000437933 532 ntBASIC4.14□□□□□ -1.75
CALD1Q05682 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.14□□□□□ -1.75
CALD1Q05682 RFC5P1-201ENST00000454419 874 ntBASIC4.14□□□□□ -1.75
CALD1Q05682 BX510359.1-201ENST00000456973 237 ntBASIC4.14□□□□□ -1.75
CALD1Q05682 AC010285.1-201ENST00000470580 392 ntBASIC4.14□□□□□ -1.75
CALD1Q05682 UBE2V1P12-201ENST00000503954 474 ntBASIC4.14□□□□□ -1.75
CALD1Q05682 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.14□□□□□ -1.75
CALD1Q05682 OR4P1P-201ENST00000530808 1136 ntBASIC4.14□□□□□ -1.75
CALD1Q05682 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.14□□□□□ -1.75
CALD1Q05682 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.14□□□□□ -1.75
CALD1Q05682 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.14□□□□□ -1.75
CALD1Q05682 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.14□□□□□ -1.75
CALD1Q05682 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.14□□□□□ -1.75
CALD1Q05682 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.14□□□□□ -1.75
CALD1Q05682 AL390838.2-201ENST00000602394 274 ntBASIC4.14□□□□□ -1.75
CALD1Q05682 XIAPP1-201ENST00000603162 600 ntBASIC4.14□□□□□ -1.75
CALD1Q05682 AL355812.1-201ENST00000603215 216 ntBASIC4.14□□□□□ -1.75
CALD1Q05682 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.14□□□□□ -1.75
CALD1Q05682 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CALD1Q05682 AC018692.3-201ENST00000623929 123 ntBASIC4.14□□□□□ -1.75
CALD1Q05682 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CALD1Q05682 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
CALD1Q05682 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.14□□□□□ -1.75
CALD1Q05682 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CALD1Q05682 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CALD1Q05682 SNRPEP2-201ENST00000397592 279 ntBASIC4.13□□□□□ -1.75
CALD1Q05682 RNU4-22P-201ENST00000411058 166 ntBASIC4.13□□□□□ -1.75
CALD1Q05682 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.13□□□□□ -1.75
CALD1Q05682 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.13□□□□□ -1.75
CALD1Q05682 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.13□□□□□ -1.75
CALD1Q05682 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.13□□□□□ -1.75
CALD1Q05682 RPL23AP76-201ENST00000441860 458 ntBASIC4.13□□□□□ -1.75
CALD1Q05682 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.13□□□□□ -1.75
CALD1Q05682 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.13□□□□□ -1.75
CALD1Q05682 AC092754.2-201ENST00000463506 460 ntBASIC4.13□□□□□ -1.75
CALD1Q05682 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.13□□□□□ -1.75
CALD1Q05682 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.13□□□□□ -1.75
CALD1Q05682 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CALD1Q05682 KLRA1P-201ENST00000503499 986 ntBASIC4.13□□□□□ -1.75
CALD1Q05682 HMGB1P22-201ENST00000505315 124 ntBASIC4.13□□□□□ -1.75
CALD1Q05682 RN7SKP31-201ENST00000516354 278 ntBASIC4.13□□□□□ -1.75
CALD1Q05682 SNORA31.20-201ENST00000517111 133 ntBASIC4.13□□□□□ -1.75
CALD1Q05682 RNU6-1073P-201ENST00000517182 106 ntBASIC4.13□□□□□ -1.75
CALD1Q05682 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.13□□□□□ -1.75
CALD1Q05682 AC104027.1-201ENST00000521887 300 ntBASIC4.13□□□□□ -1.75
CALD1Q05682 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.13□□□□□ -1.75
CALD1Q05682 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.13□□□□□ -1.75
CALD1Q05682 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.13□□□□□ -1.75
CALD1Q05682 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.13□□□□□ -1.75
CALD1Q05682 AC125611.1-201ENST00000549563 229 ntBASIC4.13□□□□□ -1.75
CALD1Q05682 AC010198.2-201ENST00000550612 259 ntBASIC4.13□□□□□ -1.75
CALD1Q05682 AC005951.1-201ENST00000576706 485 ntBASIC4.13□□□□□ -1.75
CALD1Q05682 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.13□□□□□ -1.75
CALD1Q05682 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.13□□□□□ -1.75
CALD1Q05682 AL035411.2-201ENST00000604022 421 ntBASIC4.13□□□□□ -1.75
CALD1Q05682 AL591516.1-201ENST00000611326 274 ntBASIC4.13□□□□□ -1.75
CALD1Q05682 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.13□□□□□ -1.75
CALD1Q05682 CYP3A51P-201ENST00000633513 256 ntBASIC4.13□□□□□ -1.75
CALD1Q05682 GDI2P1-201ENST00000429312 1336 ntBASIC4.13□□□□□ -1.75
CALD1Q05682 OR5BR1P-201ENST00000524992 1330 ntBASIC4.13□□□□□ -1.75
CALD1Q05682 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.13□□□□□ -1.75
CALD1Q05682 AL353746.1-201ENST00000566293 6881 ntBASIC4.12□□□□□ -1.75
CALD1Q05682 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CALD1Q05682 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.12□□□□□ -1.75
CALD1Q05682 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CALD1Q05682 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CALD1Q05682 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.12□□□□□ -1.75
CALD1Q05682 RN7SKP123-201ENST00000410732 291 ntBASIC4.12□□□□□ -1.75
CALD1Q05682 RPS3AP37-201ENST00000419176 745 ntBASIC4.12□□□□□ -1.75
CALD1Q05682 AC245291.1-201ENST00000419501 328 ntBASIC4.12□□□□□ -1.75
CALD1Q05682 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.12□□□□□ -1.75
CALD1Q05682 AC004854.1-201ENST00000440356 349 ntBASIC4.12□□□□□ -1.75
CALD1Q05682 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.12□□□□□ -1.75
CALD1Q05682 AL031313.1-201ENST00000448435 256 ntBASIC4.12□□□□□ -1.75
CALD1Q05682 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.12□□□□□ -1.75
CALD1Q05682 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CALD1Q05682 RPS3AP43-201ENST00000479743 781 ntBASIC4.12□□□□□ -1.75
CALD1Q05682 RPL31P13-201ENST00000484151 370 ntBASIC4.12□□□□□ -1.75
CALD1Q05682 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.12□□□□□ -1.75
CALD1Q05682 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.12□□□□□ -1.75
CALD1Q05682 RN7SL504P-201ENST00000494496 287 ntBASIC4.12□□□□□ -1.75
CALD1Q05682 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.12□□□□□ -1.75
CALD1Q05682 RNU6-27P-201ENST00000516146 107 ntBASIC4.12□□□□□ -1.75
CALD1Q05682 SCARNA20.6-201ENST00000517251 106 ntBASIC4.12□□□□□ -1.75
CALD1Q05682 AL163153.1-201ENST00000554223 283 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms