Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 MIR3121-201ENST00000579680 77 ntBASIC7.06□□□□□ -1.28
ATN1P54259 MIR3176-201ENST00000582210 90 ntBASIC7.06□□□□□ -1.28
ATN1P54259 AC068831.7-201ENST00000616954 363 ntBASIC7.06□□□□□ -1.28
ATN1P54259 MRPL57P1-201ENST00000621486 265 ntBASIC7.06□□□□□ -1.28
ATN1P54259 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC7.06□□□□□ -1.28
ATN1P54259 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC7.06□□□□□ -1.28
ATN1P54259 GNL2P1-201ENST00000451274 2190 ntBASIC7.06□□□□□ -1.28
ATN1P54259 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7.06□□□□□ -1.28
ATN1P54259 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC7.06□□□□□ -1.28
ATN1P54259 AC092724.1-201ENST00000624623 3397 ntBASIC7.06□□□□□ -1.28
ATN1P54259 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
ATN1P54259 CASC19-228ENST00000641414 1684 ntBASIC7.06□□□□□ -1.28
ATN1P54259 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
ATN1P54259 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC7.06□□□□□ -1.28
ATN1P54259 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC7.05□□□□□ -1.28
ATN1P54259 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.05□□□□□ -1.28
ATN1P54259 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
ATN1P54259 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC7.05□□□□□ -1.28
ATN1P54259 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
ATN1P54259 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
ATN1P54259 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC7.05□□□□□ -1.28
ATN1P54259 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
ATN1P54259 AL139384.2-201ENST00000613809 3590 ntBASIC7.05□□□□□ -1.28
ATN1P54259 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
ATN1P54259 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
ATN1P54259 RNA5SP197-201ENST00000363357 119 ntBASIC7.05□□□□□ -1.28
ATN1P54259 RNU6-843P-201ENST00000384454 104 ntBASIC7.05□□□□□ -1.28
ATN1P54259 SNORD116-21-201ENST00000384507 92 ntBASIC7.05□□□□□ -1.28
ATN1P54259 RN7SKP271-201ENST00000410528 320 ntBASIC7.05□□□□□ -1.28
ATN1P54259 RNU6-1025P-201ENST00000410629 104 ntBASIC7.05□□□□□ -1.28
ATN1P54259 BPY2DP-201ENST00000422208 265 ntBASIC7.05□□□□□ -1.28
ATN1P54259 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC7.05□□□□□ -1.28
ATN1P54259 PPIAP13-201ENST00000434706 478 ntBASIC7.05□□□□□ -1.28
ATN1P54259 AC073587.1-201ENST00000447093 876 ntBASIC7.05□□□□□ -1.28
ATN1P54259 AC109327.2-201ENST00000448339 378 ntBASIC7.05□□□□□ -1.28
ATN1P54259 snoU13.30-201ENST00000458951 104 ntBASIC7.05□□□□□ -1.28
ATN1P54259 RN7SL714P-201ENST00000487050 298 ntBASIC7.05□□□□□ -1.28
ATN1P54259 SNRPCP2-201ENST00000504370 475 ntBASIC7.05□□□□□ -1.28
ATN1P54259 ATP5LP3-201ENST00000514223 304 ntBASIC7.05□□□□□ -1.28
ATN1P54259 RNU4ATAC10P-201ENST00000516967 122 ntBASIC7.05□□□□□ -1.28
ATN1P54259 RN7SKP98-201ENST00000517070 156 ntBASIC7.05□□□□□ -1.28
ATN1P54259 AC139365.2-201ENST00000517972 253 ntBASIC7.05□□□□□ -1.28
ATN1P54259 IGHV4-55-201ENST00000520889 368 ntBASIC7.05□□□□□ -1.28
ATN1P54259 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC7.05□□□□□ -1.28
ATN1P54259 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC7.05□□□□□ -1.28
ATN1P54259 OR1F2P-201ENST00000570470 933 ntBASIC7.05□□□□□ -1.28
ATN1P54259 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC7.05□□□□□ -1.28
ATN1P54259 AC005332.4-201ENST00000592752 579 ntBASIC7.05□□□□□ -1.28
ATN1P54259 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC7.05□□□□□ -1.28
ATN1P54259 RMST_4.1-201ENST00000616886 107 ntBASIC7.05□□□□□ -1.28
ATN1P54259 AP005431.1-201ENST00000618479 319 ntBASIC7.05□□□□□ -1.28
ATN1P54259 U1.31-201ENST00000620022 160 ntBASIC7.05□□□□□ -1.28
ATN1P54259 CYP4F35P-202ENST00000636121 390 ntBASIC7.05□□□□□ -1.28
ATN1P54259 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC7.05□□□□□ -1.28
ATN1P54259 MAPK10-270ENST00000641102 3538 ntBASIC7.05□□□□□ -1.28
ATN1P54259 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
ATN1P54259 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
ATN1P54259 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC7.05□□□□□ -1.28
ATN1P54259 AC011933.2-201ENST00000578539 2790 ntBASIC7.05□□□□□ -1.28
ATN1P54259 AL451142.2-201ENST00000429076 2090 ntBASIC7.05□□□□□ -1.28
ATN1P54259 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
ATN1P54259 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
ATN1P54259 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.05□□□□□ -1.28
ATN1P54259 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
ATN1P54259 AC024587.1-201ENST00000505925 2157 ntBASIC7.05□□□□□ -1.28
ATN1P54259 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
ATN1P54259 MAPK10-323ENST00000641493 3207 ntBASIC7.05□□□□□ -1.28
ATN1P54259 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
ATN1P54259 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ATN1P54259 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ATN1P54259 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC7.04□□□□□ -1.28
ATN1P54259 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
ATN1P54259 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ATN1P54259 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ATN1P54259 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ATN1P54259 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ATN1P54259 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC7.04□□□□□ -1.28
ATN1P54259 RNU6-103P-201ENST00000363686 107 ntBASIC7.04□□□□□ -1.28
ATN1P54259 RNU6-381P-201ENST00000391259 108 ntBASIC7.04□□□□□ -1.28
ATN1P54259 AL391361.1-201ENST00000405580 489 ntBASIC7.04□□□□□ -1.28
ATN1P54259 RPL7AP25-201ENST00000423357 805 ntBASIC7.04□□□□□ -1.28
ATN1P54259 BTF3P11-201ENST00000426582 477 ntBASIC7.04□□□□□ -1.28
ATN1P54259 AL163193.1-201ENST00000444895 788 ntBASIC7.04□□□□□ -1.28
ATN1P54259 AC010655.1-201ENST00000449336 292 ntBASIC7.04□□□□□ -1.28
ATN1P54259 AP006222.1-205ENST00000450734 457 ntBASIC7.04□□□□□ -1.28
ATN1P54259 AL121594.1-201ENST00000475906 575 ntBASIC7.04□□□□□ -1.28
ATN1P54259 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC7.04□□□□□ -1.28
ATN1P54259 RN7SKP164-201ENST00000516138 266 ntBASIC7.04□□□□□ -1.28
ATN1P54259 RNU6-567P-201ENST00000516746 107 ntBASIC7.04□□□□□ -1.28
ATN1P54259 RNU2-60P-201ENST00000517290 128 ntBASIC7.04□□□□□ -1.28
ATN1P54259 OR7E18P-201ENST00000592589 702 ntBASIC7.04□□□□□ -1.28
ATN1P54259 AC008814.1-201ENST00000603797 406 ntBASIC7.04□□□□□ -1.28
ATN1P54259 AL352984.2-201ENST00000611153 546 ntBASIC7.04□□□□□ -1.28
ATN1P54259 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC7.04□□□□□ -1.28
ATN1P54259 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ATN1P54259 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC7.04□□□□□ -1.28
ATN1P54259 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ATN1P54259 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ATN1P54259 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
ATN1P54259 RBMY1HP-201ENST00000382759 1389 ntBASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms