Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 RPL22P17-201ENST00000438729 315 ntBASIC3.43□□□□□ -1.86
HOXA1P49639 RPL12P3-201ENST00000440080 396 ntBASIC3.43□□□□□ -1.86
HOXA1P49639 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.43□□□□□ -1.86
HOXA1P49639 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXA1P49639 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXA1P49639 AC104563.1-201ENST00000476147 376 ntBASIC3.43□□□□□ -1.86
HOXA1P49639 RPL9P33-201ENST00000484311 566 ntBASIC3.43□□□□□ -1.86
HOXA1P49639 LARP1BP2-201ENST00000486594 519 ntBASIC3.43□□□□□ -1.86
HOXA1P49639 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
HOXA1P49639 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXA1P49639 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.43□□□□□ -1.86
HOXA1P49639 AC109464.2-201ENST00000510242 943 ntBASIC3.43□□□□□ -1.86
HOXA1P49639 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXA1P49639 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXA1P49639 OR7H2P-201ENST00000513483 306 ntBASIC3.43□□□□□ -1.86
HOXA1P49639 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXA1P49639 RN7SKP298-201ENST00000515950 94 ntBASIC3.43□□□□□ -1.86
HOXA1P49639 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXA1P49639 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.43□□□□□ -1.86
HOXA1P49639 AC006064.5-201ENST00000541782 248 ntBASIC3.43□□□□□ -1.86
HOXA1P49639 AC123904.2-201ENST00000548059 300 ntBASIC3.43□□□□□ -1.86
HOXA1P49639 RPL21P5-201ENST00000554662 472 ntBASIC3.43□□□□□ -1.86
HOXA1P49639 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXA1P49639 MIR4270-201ENST00000581799 70 ntBASIC3.43□□□□□ -1.86
HOXA1P49639 AL353997.4-201ENST00000586196 166 ntBASIC3.43□□□□□ -1.86
HOXA1P49639 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXA1P49639 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.43□□□□□ -1.86
HOXA1P49639 AC079587.1-201ENST00000603846 277 ntBASIC3.43□□□□□ -1.86
HOXA1P49639 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.43□□□□□ -1.86
HOXA1P49639 AL365503.1-201ENST00000605247 905 ntBASIC3.43□□□□□ -1.86
HOXA1P49639 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXA1P49639 AC138749.5-201ENST00000611461 208 ntBASIC3.43□□□□□ -1.86
HOXA1P49639 AC091834.1-201ENST00000614543 472 ntBASIC3.43□□□□□ -1.86
HOXA1P49639 AC116165.2-201ENST00000616705 206 ntBASIC3.43□□□□□ -1.86
HOXA1P49639 MIR6719-201ENST00000622428 87 ntBASIC3.43□□□□□ -1.86
HOXA1P49639 AC079597.1-201ENST00000624306 508 ntBASIC3.43□□□□□ -1.86
HOXA1P49639 MIR4496-201ENST00000635896 61 ntBASIC3.43□□□□□ -1.86
HOXA1P49639 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HOXA1P49639 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
HOXA1P49639 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
HOXA1P49639 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HOXA1P49639 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HOXA1P49639 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.43□□□□□ -1.86
HOXA1P49639 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.43□□□□□ -1.86
HOXA1P49639 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HOXA1P49639 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.43□□□□□ -1.86
HOXA1P49639 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
HOXA1P49639 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
HOXA1P49639 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HOXA1P49639 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HOXA1P49639 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.42□□□□□ -1.86
HOXA1P49639 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HOXA1P49639 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.42□□□□□ -1.86
HOXA1P49639 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.42□□□□□ -1.86
HOXA1P49639 AL161781.1-201ENST00000354277 403 ntBASIC3.42□□□□□ -1.86
HOXA1P49639 RNA5SP167-201ENST00000365461 116 ntBASIC3.42□□□□□ -1.86
HOXA1P49639 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXA1P49639 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HOXA1P49639 RPS4XP9-201ENST00000405151 780 ntBASIC3.42□□□□□ -1.86
HOXA1P49639 RN7SKP33-201ENST00000410942 340 ntBASIC3.42□□□□□ -1.86
HOXA1P49639 UBE2V1P10-201ENST00000414685 269 ntBASIC3.42□□□□□ -1.86
HOXA1P49639 ELOCP17-201ENST00000414751 326 ntBASIC3.42□□□□□ -1.86
HOXA1P49639 BX295541.1-201ENST00000417774 250 ntBASIC3.42□□□□□ -1.86
HOXA1P49639 AC069213.2-201ENST00000420238 366 ntBASIC3.42□□□□□ -1.86
HOXA1P49639 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.42□□□□□ -1.86
HOXA1P49639 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXA1P49639 CKS1BP5-201ENST00000434172 273 ntBASIC3.42□□□□□ -1.86
HOXA1P49639 MTND6P13-201ENST00000443510 523 ntBASIC3.42□□□□□ -1.86
HOXA1P49639 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXA1P49639 ARL2BPP10-201ENST00000446487 531 ntBASIC3.42□□□□□ -1.86
HOXA1P49639 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXA1P49639 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.42□□□□□ -1.86
HOXA1P49639 RPS20P24-201ENST00000457473 361 ntBASIC3.42□□□□□ -1.86
HOXA1P49639 AP000873.1-201ENST00000463987 400 ntBASIC3.42□□□□□ -1.86
HOXA1P49639 RPL21P126-201ENST00000470049 478 ntBASIC3.42□□□□□ -1.86
HOXA1P49639 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC3.42□□□□□ -1.86
HOXA1P49639 MTND1P3-201ENST00000484956 952 ntBASIC3.42□□□□□ -1.86
HOXA1P49639 AC083982.1-201ENST00000485679 344 ntBASIC3.42□□□□□ -1.86
HOXA1P49639 AL358832.1-201ENST00000497800 389 ntBASIC3.42□□□□□ -1.86
HOXA1P49639 AC112204.1-201ENST00000502591 103 ntBASIC3.42□□□□□ -1.86
HOXA1P49639 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXA1P49639 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.42□□□□□ -1.86
HOXA1P49639 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXA1P49639 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXA1P49639 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.42□□□□□ -1.86
HOXA1P49639 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.42□□□□□ -1.86
HOXA1P49639 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.42□□□□□ -1.86
HOXA1P49639 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXA1P49639 AL109766.1-201ENST00000555080 552 ntBASIC3.42□□□□□ -1.86
HOXA1P49639 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.42□□□□□ -1.86
HOXA1P49639 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.42□□□□□ -1.86
HOXA1P49639 AC007599.1-201ENST00000568688 1174 ntBASIC3.42□□□□□ -1.86
HOXA1P49639 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXA1P49639 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXA1P49639 UBE2L4-201ENST00000587688 464 ntBASIC3.42□□□□□ -1.86
HOXA1P49639 AL451044.1-201ENST00000604867 238 ntBASIC3.42□□□□□ -1.86
HOXA1P49639 AC090578.1-201ENST00000604955 591 ntBASIC3.42□□□□□ -1.86
HOXA1P49639 AC007546.1-201ENST00000619452 559 ntBASIC3.42□□□□□ -1.86
HOXA1P49639 AL158801.5-201ENST00000623123 465 ntBASIC3.42□□□□□ -1.86
HOXA1P49639 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms