Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AC104108.1-201ENST00000509930 412 ntBASIC3.03□□□□□ -1.92
HOXA9P31269 AC119751.1-201ENST00000513357 765 ntBASIC3.03□□□□□ -1.92
HOXA9P31269 PRELID3BP4-201ENST00000515476 571 ntBASIC3.03□□□□□ -1.92
HOXA9P31269 RN7SKP96-201ENST00000516948 297 ntBASIC3.03□□□□□ -1.92
HOXA9P31269 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.03□□□□□ -1.92
HOXA9P31269 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.03□□□□□ -1.92
HOXA9P31269 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.03□□□□□ -1.92
HOXA9P31269 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HOXA9P31269 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.03□□□□□ -1.92
HOXA9P31269 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.03□□□□□ -1.92
HOXA9P31269 SNORD84-203ENST00000584275 78 ntBASIC3.03□□□□□ -1.92
HOXA9P31269 AC008507.2-201ENST00000588402 1176 ntBASIC3.03□□□□□ -1.92
HOXA9P31269 VN1R90P-201ENST00000595717 726 ntBASIC3.03□□□□□ -1.92
HOXA9P31269 BDH2P1-201ENST00000602288 736 ntBASIC3.03□□□□□ -1.92
HOXA9P31269 AC013468.1-201ENST00000608680 598 ntBASIC3.03□□□□□ -1.92
HOXA9P31269 AC018926.3-201ENST00000618841 406 ntBASIC3.03□□□□□ -1.92
HOXA9P31269 AC010872.1-201ENST00000624225 675 ntBASIC3.03□□□□□ -1.92
HOXA9P31269 AL121594.5-201ENST00000631724 573 ntBASIC3.03□□□□□ -1.92
HOXA9P31269 AC017104.5-201ENST00000637647 639 ntBASIC3.03□□□□□ -1.92
HOXA9P31269 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.03□□□□□ -1.93
HOXA9P31269 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
HOXA9P31269 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.02□□□□□ -1.93
HOXA9P31269 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HOXA9P31269 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
HOXA9P31269 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HOXA9P31269 AL512646.1-201ENST00000269395 1077 ntBASIC3.02□□□□□ -1.93
HOXA9P31269 RNU5B-1-201ENST00000363286 116 ntBASIC3.02□□□□□ -1.93
HOXA9P31269 RNU5B-4P-201ENST00000363508 111 ntBASIC3.02□□□□□ -1.93
HOXA9P31269 RNU6-1257P-201ENST00000384625 110 ntBASIC3.02□□□□□ -1.93
HOXA9P31269 AL360182.1-201ENST00000397433 468 ntBASIC3.02□□□□□ -1.93
HOXA9P31269 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
HOXA9P31269 RNU6-1077P-201ENST00000410506 102 ntBASIC3.02□□□□□ -1.93
HOXA9P31269 SETP8-201ENST00000435341 628 ntBASIC3.02□□□□□ -1.93
HOXA9P31269 AC009969.1-201ENST00000438726 172 ntBASIC3.02□□□□□ -1.93
HOXA9P31269 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.02□□□□□ -1.93
HOXA9P31269 AL050341.1-201ENST00000447743 313 ntBASIC3.02□□□□□ -1.93
HOXA9P31269 AC108938.1-201ENST00000451204 136 ntBASIC3.02□□□□□ -1.93
HOXA9P31269 RPS24P6-201ENST00000452670 400 ntBASIC3.02□□□□□ -1.93
HOXA9P31269 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.02□□□□□ -1.93
HOXA9P31269 AC008280.2-201ENST00000455473 307 ntBASIC3.02□□□□□ -1.93
HOXA9P31269 CDC42P1-201ENST00000456658 548 ntBASIC3.02□□□□□ -1.93
HOXA9P31269 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HOXA9P31269 RN7SL432P-201ENST00000484057 298 ntBASIC3.02□□□□□ -1.93
HOXA9P31269 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.02□□□□□ -1.93
HOXA9P31269 ARL4AP2-201ENST00000507378 601 ntBASIC3.02□□□□□ -1.93
HOXA9P31269 AC010486.1-201ENST00000511793 424 ntBASIC3.02□□□□□ -1.93
HOXA9P31269 RNU6-416P-201ENST00000516265 103 ntBASIC3.02□□□□□ -1.93
HOXA9P31269 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.02□□□□□ -1.93
HOXA9P31269 AC006116.7-201ENST00000590141 756 ntBASIC3.02□□□□□ -1.93
HOXA9P31269 AC096947.1-201ENST00000603233 470 ntBASIC3.02□□□□□ -1.93
HOXA9P31269 AP002906.1-201ENST00000603405 233 ntBASIC3.02□□□□□ -1.93
HOXA9P31269 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.02□□□□□ -1.93
HOXA9P31269 AC007619.2-201ENST00000605743 379 ntBASIC3.02□□□□□ -1.93
HOXA9P31269 AC092608.3-201ENST00000625017 386 ntBASIC3.02□□□□□ -1.93
HOXA9P31269 AC006927.2-201ENST00000639256 389 ntBASIC3.02□□□□□ -1.93
HOXA9P31269 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
HOXA9P31269 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HOXA9P31269 RNU6-353P-201ENST00000364266 108 ntBASIC3.01□□□□□ -1.93
HOXA9P31269 RNU6-837P-201ENST00000391056 108 ntBASIC3.01□□□□□ -1.93
HOXA9P31269 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HOXA9P31269 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.01□□□□□ -1.93
HOXA9P31269 AC092638.1-201ENST00000411966 1275 ntBASIC3.01□□□□□ -1.93
HOXA9P31269 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.01□□□□□ -1.93
HOXA9P31269 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.01□□□□□ -1.93
HOXA9P31269 SNRPEP4-201ENST00000435815 279 ntBASIC3.01□□□□□ -1.93
HOXA9P31269 AL162389.1-201ENST00000449233 177 ntBASIC3.01□□□□□ -1.93
HOXA9P31269 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.01□□□□□ -1.93
HOXA9P31269 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.01□□□□□ -1.93
HOXA9P31269 AC104472.2-201ENST00000469035 601 ntBASIC3.01□□□□□ -1.93
HOXA9P31269 AC015724.1-201ENST00000478577 156 ntBASIC3.01□□□□□ -1.93
HOXA9P31269 AC126121.1-201ENST00000482313 553 ntBASIC3.01□□□□□ -1.93
HOXA9P31269 HMGB1P22-201ENST00000505315 124 ntBASIC3.01□□□□□ -1.93
HOXA9P31269 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HOXA9P31269 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.01□□□□□ -1.93
HOXA9P31269 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.01□□□□□ -1.93
HOXA9P31269 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HOXA9P31269 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.01□□□□□ -1.93
HOXA9P31269 AC006518.2-201ENST00000542513 940 ntBASIC3.01□□□□□ -1.93
HOXA9P31269 AL442163.2-201ENST00000553912 710 ntBASIC3.01□□□□□ -1.93
HOXA9P31269 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.01□□□□□ -1.93
HOXA9P31269 HMGB1P6-201ENST00000569046 646 ntBASIC3.01□□□□□ -1.93
HOXA9P31269 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.01□□□□□ -1.93
HOXA9P31269 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.01□□□□□ -1.93
HOXA9P31269 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.01□□□□□ -1.93
HOXA9P31269 NRBF2P5-201ENST00000603087 788 ntBASIC3.01□□□□□ -1.93
HOXA9P31269 AL035413.2-201ENST00000604801 525 ntBASIC3.01□□□□□ -1.93
HOXA9P31269 AC124016.2-201ENST00000610058 665 ntBASIC3.01□□□□□ -1.93
HOXA9P31269 AL512427.1-201ENST00000618593 349 ntBASIC3.01□□□□□ -1.93
HOXA9P31269 AC006111.3-201ENST00000622137 383 ntBASIC3.01□□□□□ -1.93
HOXA9P31269 AL049777.1-201ENST00000622740 518 ntBASIC3.01□□□□□ -1.93
HOXA9P31269 AC126544.2-201ENST00000625174 749 ntBASIC3.01□□□□□ -1.93
HOXA9P31269 AC090897.3-201ENST00000636973 1157 ntBASIC3.01□□□□□ -1.93
HOXA9P31269 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.01□□□□□ -1.93
HOXA9P31269 AP002907.1-201ENST00000606361 1430 ntBASIC3.01□□□□□ -1.93
HOXA9P31269 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HOXA9P31269 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3□□□□□ -1.93
HOXA9P31269 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HOXA9P31269 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HOXA9P31269 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HOXA9P31269 MTND5P7-201ENST00000413558 1798 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms