Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC187A0A096LP49 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC187A0A096LP49 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC187A0A096LP49 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC187A0A096LP49 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC187A0A096LP49 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC187A0A096LP49 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC187A0A096LP49 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC187A0A096LP49 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 RNA5SP258-201ENST00000362750 119 ntBASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 Y_RNA.234-201ENST00000364409 97 ntBASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 SNORA62.3-201ENST00000365110 153 ntBASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 XGY1-201ENST00000381172 446 ntBASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 Y_RNA.582-201ENST00000391023 95 ntBASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 U3.29-201ENST00000391296 212 ntBASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 RPS20P14-201ENST00000412545 360 ntBASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 HMGB3P23-201ENST00000414981 585 ntBASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 OR51A5P-201ENST00000415429 942 ntBASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 AC245054.1-201ENST00000420944 258 ntBASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 NANOGP6-201ENST00000429190 847 ntBASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 EZH2P1-201ENST00000431167 291 ntBASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 AC000111.3-201ENST00000433478 193 ntBASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 PGBD4P3-201ENST00000440731 581 ntBASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 AL118496.2-201ENST00000448300 230 ntBASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 NANOGNBP1-201ENST00000448444 480 ntBASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 AL162151.2-201ENST00000448875 158 ntBASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 AC079804.1-201ENST00000461922 436 ntBASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 AL121769.1-201ENST00000469473 401 ntBASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 AC034236.1-201ENST00000469891 373 ntBASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 NDUFB4P2-201ENST00000509515 391 ntBASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 RNU6-506P-201ENST00000516553 94 ntBASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 AP003467.2-201ENST00000520175 319 ntBASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 GLYCAM1-201ENST00000546596 285 ntBASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 RPL21P5-201ENST00000554662 472 ntBASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 AC137800.2-201ENST00000574375 120 ntBASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 RN7SL600P-201ENST00000581811 299 ntBASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 AC103710.1-201ENST00000610003 901 ntBASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 FAM27D1-201ENST00000612308 341 ntBASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 AC006133.1-201ENST00000617106 264 ntBASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC187A0A096LP49 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 NXPH1-205ENST00000602349 1953 ntBASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 AL356489.2-201ENST00000566968 3528 ntBASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 AL133243.3-201ENST00000617415 3004 ntBASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 RNU1-14P-201ENST00000362759 152 ntBASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 RNU1-83P-201ENST00000363426 164 ntBASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 SNORA72.1-201ENST00000363485 129 ntBASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 Y_RNA.256-201ENST00000364594 104 ntBASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 RNU6-259P-201ENST00000383999 107 ntBASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 RNU5A-6P-201ENST00000384136 116 ntBASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 RNU6-1011P-201ENST00000384668 107 ntBASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 RPS20P2-201ENST00000402520 389 ntBASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 FGF7P8-201ENST00000402994 292 ntBASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 LAP3P1-201ENST00000403648 294 ntBASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 MTCYBP24-201ENST00000420387 1106 ntBASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 AL451062.2-201ENST00000427515 271 ntBASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 COX6B1P7-201ENST00000430845 235 ntBASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 RPL23AP25-201ENST00000430973 463 ntBASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 MTCO2P11-201ENST00000431069 680 ntBASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 TDGF1P1-201ENST00000445734 527 ntBASIC4.13□□□□□ -1.75
CCDC187A0A096LP49 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms