Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SYNPO2Q9UMS6 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SYNPO2Q9UMS6 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SYNPO2Q9UMS6 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 FARSBP1-201ENST00000435808 1778 ntBASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 SAGE2P-201ENST00000420011 2126 ntBASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 Y_RNA.70-201ENST00000362886 110 ntBASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 RNA5SP479-201ENST00000364858 117 ntBASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 AL031679.1-201ENST00000400616 525 ntBASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 RPS3AP24-201ENST00000407896 734 ntBASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 RNU4-55P-201ENST00000410731 137 ntBASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 MTCO1P17-201ENST00000411522 491 ntBASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 RPL36AP36-201ENST00000418616 301 ntBASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 ELOCP14-201ENST00000428070 331 ntBASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 RPL22P17-201ENST00000438729 315 ntBASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 ELOCP7-201ENST00000439968 331 ntBASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 AL132838.2-201ENST00000492041 314 ntBASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 AC098799.2-201ENST00000509466 868 ntBASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 OR5AQ1P-201ENST00000527596 927 ntBASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 CKS1BP3-201ENST00000600888 237 ntBASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 BBIP1P1-201ENST00000602999 279 ntBASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 AL365503.1-201ENST00000605247 905 ntBASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 AC104458.1-201ENST00000608243 463 ntBASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 MIR7151-201ENST00000617477 60 ntBASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 PISRT1-201ENST00000626175 531 ntBASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 AC017104.4-201ENST00000636283 1592 ntBASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SYNPO2Q9UMS6 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.92□□□□□ -1.62
SYNPO2Q9UMS6 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SYNPO2Q9UMS6 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SYNPO2Q9UMS6 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
SYNPO2Q9UMS6 AC073544.1-201ENST00000600110 1595 ntBASIC4.92□□□□□ -1.62
SYNPO2Q9UMS6 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
SYNPO2Q9UMS6 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SYNPO2Q9UMS6 SNORD115.1-201ENST00000391109 76 ntBASIC4.92□□□□□ -1.62
SYNPO2Q9UMS6 SNORD66.1-201ENST00000391230 76 ntBASIC4.92□□□□□ -1.62
SYNPO2Q9UMS6 RN7SKP167-201ENST00000411047 285 ntBASIC4.92□□□□□ -1.62
SYNPO2Q9UMS6 AL160275.2-201ENST00000412010 394 ntBASIC4.92□□□□□ -1.62
SYNPO2Q9UMS6 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.92□□□□□ -1.62
SYNPO2Q9UMS6 RAC1P3-201ENST00000416129 580 ntBASIC4.92□□□□□ -1.62
SYNPO2Q9UMS6 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.92□□□□□ -1.62
SYNPO2Q9UMS6 AC092832.1-201ENST00000422934 400 ntBASIC4.92□□□□□ -1.62
SYNPO2Q9UMS6 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.92□□□□□ -1.62
SYNPO2Q9UMS6 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.92□□□□□ -1.62
SYNPO2Q9UMS6 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.92□□□□□ -1.62
SYNPO2Q9UMS6 SNRPEP8-201ENST00000442866 260 ntBASIC4.92□□□□□ -1.62
SYNPO2Q9UMS6 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.92□□□□□ -1.62
SYNPO2Q9UMS6 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.92□□□□□ -1.62
SYNPO2Q9UMS6 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.92□□□□□ -1.62
SYNPO2Q9UMS6 RPL23AP2-201ENST00000471227 466 ntBASIC4.92□□□□□ -1.62
SYNPO2Q9UMS6 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4.92□□□□□ -1.62
SYNPO2Q9UMS6 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.92□□□□□ -1.62
SYNPO2Q9UMS6 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.92□□□□□ -1.62
SYNPO2Q9UMS6 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
SYNPO2Q9UMS6 RNU6-1003P-201ENST00000517099 105 ntBASIC4.92□□□□□ -1.62
SYNPO2Q9UMS6 PHBP17-201ENST00000528576 541 ntBASIC4.92□□□□□ -1.62
SYNPO2Q9UMS6 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SYNPO2Q9UMS6 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.92□□□□□ -1.62
SYNPO2Q9UMS6 ADI1P3-201ENST00000549509 470 ntBASIC4.92□□□□□ -1.62
SYNPO2Q9UMS6 AC006504.3-201ENST00000586818 523 ntBASIC4.92□□□□□ -1.62
SYNPO2Q9UMS6 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.92□□□□□ -1.62
SYNPO2Q9UMS6 DUXAP4-201ENST00000603046 613 ntBASIC4.92□□□□□ -1.62
SYNPO2Q9UMS6 AC006338.1-201ENST00000618453 749 ntBASIC4.92□□□□□ -1.62
SYNPO2Q9UMS6 AC112484.5-201ENST00000624189 228 ntBASIC4.92□□□□□ -1.62
SYNPO2Q9UMS6 LRRC77P-213ENST00000637727 880 ntBASIC4.92□□□□□ -1.62
SYNPO2Q9UMS6 MARK2P15-201ENST00000432204 2186 ntBASIC4.92□□□□□ -1.62
SYNPO2Q9UMS6 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
SYNPO2Q9UMS6 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
SYNPO2Q9UMS6 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.92□□□□□ -1.62
SYNPO2Q9UMS6 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SYNPO2Q9UMS6 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SYNPO2Q9UMS6 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms