Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 Y_RNA.590-201ENST00000410140 107 ntBASIC5.74□□□□□ -1.49
HPS1Q92902 RNA5SP494-201ENST00000410653 129 ntBASIC5.74□□□□□ -1.49
HPS1Q92902 RNU2-61P-201ENST00000411069 191 ntBASIC5.74□□□□□ -1.49
HPS1Q92902 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC5.74□□□□□ -1.49
HPS1Q92902 RPS15AP6-201ENST00000420703 385 ntBASIC5.74□□□□□ -1.49
HPS1Q92902 TRAPPC2P4-201ENST00000421750 331 ntBASIC5.74□□□□□ -1.49
HPS1Q92902 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC5.74□□□□□ -1.49
HPS1Q92902 IGKV1OR9-2-201ENST00000431378 277 ntBASIC5.74□□□□□ -1.49
HPS1Q92902 OR6D1P-201ENST00000436165 939 ntBASIC5.74□□□□□ -1.49
HPS1Q92902 AC083855.1-201ENST00000440041 258 ntBASIC5.74□□□□□ -1.49
HPS1Q92902 GAPDHP20-201ENST00000444107 1007 ntBASIC5.74□□□□□ -1.49
HPS1Q92902 SSXP4-201ENST00000451349 245 ntBASIC5.74□□□□□ -1.49
HPS1Q92902 RPL37P6-202ENST00000464216 403 ntBASIC5.74□□□□□ -1.49
HPS1Q92902 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
HPS1Q92902 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC5.74□□□□□ -1.49
HPS1Q92902 RN7SKP196-201ENST00000516267 345 ntBASIC5.74□□□□□ -1.49
HPS1Q92902 Y_RNA.679-201ENST00000516416 91 ntBASIC5.74□□□□□ -1.49
HPS1Q92902 RNU6-844P-201ENST00000517175 102 ntBASIC5.74□□□□□ -1.49
HPS1Q92902 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.74□□□□□ -1.49
HPS1Q92902 TRAV32-201ENST00000553993 340 ntBASIC5.74□□□□□ -1.49
HPS1Q92902 AC112693.2-201ENST00000556538 232 ntBASIC5.74□□□□□ -1.49
HPS1Q92902 AC120057.2-201ENST00000571520 271 ntBASIC5.74□□□□□ -1.49
HPS1Q92902 MIR212-201ENST00000586026 110 ntBASIC5.74□□□□□ -1.49
HPS1Q92902 AC011487.3-201ENST00000593607 453 ntBASIC5.74□□□□□ -1.49
HPS1Q92902 AC063977.7-201ENST00000594454 337 ntBASIC5.74□□□□□ -1.49
HPS1Q92902 AC006077.1-201ENST00000604746 343 ntBASIC5.74□□□□□ -1.49
HPS1Q92902 AL590032.1-201ENST00000604920 252 ntBASIC5.74□□□□□ -1.49
HPS1Q92902 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC5.74□□□□□ -1.49
HPS1Q92902 OR4G2P-202ENST00000641004 1759 ntBASIC5.74□□□□□ -1.49
HPS1Q92902 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HPS1Q92902 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.74□□□□□ -1.49
HPS1Q92902 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.74□□□□□ -1.49
HPS1Q92902 AC005261.2-201ENST00000593427 4258 ntBASIC5.74□□□□□ -1.49
HPS1Q92902 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HPS1Q92902 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
HPS1Q92902 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
HPS1Q92902 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HPS1Q92902 AC100821.1-201ENST00000523153 2479 ntBASIC5.73□□□□□ -1.49
HPS1Q92902 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HPS1Q92902 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.73□□□□□ -1.49
HPS1Q92902 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HPS1Q92902 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.73□□□□□ -1.49
HPS1Q92902 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC5.73□□□□□ -1.49
HPS1Q92902 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.73□□□□□ -1.49
HPS1Q92902 HSP90AA4P-202ENST00000506915 2228 ntBASIC5.73□□□□□ -1.49
HPS1Q92902 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HPS1Q92902 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.73□□□□□ -1.49
HPS1Q92902 RNU1-55P-201ENST00000365510 158 ntBASIC5.73□□□□□ -1.49
HPS1Q92902 RN7SKP187-201ENST00000365536 330 ntBASIC5.73□□□□□ -1.49
HPS1Q92902 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.73□□□□□ -1.49
HPS1Q92902 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC5.73□□□□□ -1.49
HPS1Q92902 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC5.73□□□□□ -1.49
HPS1Q92902 GAPDHP27-201ENST00000447427 1020 ntBASIC5.73□□□□□ -1.49
HPS1Q92902 AC083806.1-201ENST00000468934 316 ntBASIC5.73□□□□□ -1.49
HPS1Q92902 RPL30P1-201ENST00000488676 339 ntBASIC5.73□□□□□ -1.49
HPS1Q92902 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC5.73□□□□□ -1.49
HPS1Q92902 AC006427.1-201ENST00000514359 712 ntBASIC5.73□□□□□ -1.49
HPS1Q92902 RNU5F-8P-201ENST00000515941 111 ntBASIC5.73□□□□□ -1.49
HPS1Q92902 RNU2-31P-201ENST00000516954 155 ntBASIC5.73□□□□□ -1.49
HPS1Q92902 RN7SKP183-201ENST00000517169 324 ntBASIC5.73□□□□□ -1.49
HPS1Q92902 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC5.73□□□□□ -1.49
HPS1Q92902 WBP1LP3-201ENST00000523033 208 ntBASIC5.73□□□□□ -1.49
HPS1Q92902 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC5.73□□□□□ -1.49
HPS1Q92902 AC073916.1-201ENST00000545095 130 ntBASIC5.73□□□□□ -1.49
HPS1Q92902 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC5.73□□□□□ -1.49
HPS1Q92902 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.73□□□□□ -1.49
HPS1Q92902 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.73□□□□□ -1.49
HPS1Q92902 MIR4504-201ENST00000577413 92 ntBASIC5.73□□□□□ -1.49
HPS1Q92902 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.73□□□□□ -1.49
HPS1Q92902 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.73□□□□□ -1.49
HPS1Q92902 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.73□□□□□ -1.49
HPS1Q92902 AC005514.1-201ENST00000623521 208 ntBASIC5.73□□□□□ -1.49
HPS1Q92902 AC110801.1-201ENST00000623590 212 ntBASIC5.73□□□□□ -1.49
HPS1Q92902 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.73□□□□□ -1.49
HPS1Q92902 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HPS1Q92902 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
HPS1Q92902 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
HPS1Q92902 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
HPS1Q92902 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
HPS1Q92902 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HPS1Q92902 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.73□□□□□ -1.49
HPS1Q92902 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HPS1Q92902 AC074141.1-201ENST00000588129 2995 ntBASIC5.73□□□□□ -1.49
HPS1Q92902 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.73□□□□□ -1.49
HPS1Q92902 RACGAP1P-201ENST00000550663 1879 ntBASIC5.73□□□□□ -1.49
HPS1Q92902 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HPS1Q92902 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
HPS1Q92902 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC5.72□□□□□ -1.49
HPS1Q92902 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HPS1Q92902 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
HPS1Q92902 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HPS1Q92902 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
HPS1Q92902 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.72□□□□□ -1.49
HPS1Q92902 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC5.72□□□□□ -1.49
HPS1Q92902 Y_RNA.82-201ENST00000363000 102 ntBASIC5.72□□□□□ -1.49
HPS1Q92902 Y_RNA.92-201ENST00000363043 102 ntBASIC5.72□□□□□ -1.49
HPS1Q92902 Y_RNA.215-201ENST00000364204 112 ntBASIC5.72□□□□□ -1.49
HPS1Q92902 RNU6-371P-201ENST00000364283 108 ntBASIC5.72□□□□□ -1.49
HPS1Q92902 Y_RNA.235-201ENST00000364412 102 ntBASIC5.72□□□□□ -1.49
HPS1Q92902 RNU6-923P-201ENST00000364753 107 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms