Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.81□□□□□ -1.48
SIX5Q8N196 Y_RNA.404-201ENST00000383978 102 ntBASIC5.81□□□□□ -1.48
SIX5Q8N196 Y_RNA.455-201ENST00000384230 98 ntBASIC5.81□□□□□ -1.48
SIX5Q8N196 Y_RNA.476-201ENST00000384347 108 ntBASIC5.81□□□□□ -1.48
SIX5Q8N196 RNU6-293P-201ENST00000411259 106 ntBASIC5.81□□□□□ -1.48
SIX5Q8N196 HMGB3P2-201ENST00000411913 584 ntBASIC5.81□□□□□ -1.48
SIX5Q8N196 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC5.81□□□□□ -1.48
SIX5Q8N196 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.81□□□□□ -1.48
SIX5Q8N196 AC114482.1-201ENST00000418010 247 ntBASIC5.81□□□□□ -1.48
SIX5Q8N196 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.81□□□□□ -1.48
SIX5Q8N196 AL591704.1-201ENST00000432574 275 ntBASIC5.81□□□□□ -1.48
SIX5Q8N196 GAPDHP27-201ENST00000447427 1020 ntBASIC5.81□□□□□ -1.48
SIX5Q8N196 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.81□□□□□ -1.48
SIX5Q8N196 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.81□□□□□ -1.48
SIX5Q8N196 OR51K1P-201ENST00000510214 950 ntBASIC5.81□□□□□ -1.48
SIX5Q8N196 RNU6-470P-201ENST00000515954 104 ntBASIC5.81□□□□□ -1.48
SIX5Q8N196 Y_RNA.689-201ENST00000516589 107 ntBASIC5.81□□□□□ -1.48
SIX5Q8N196 RNU6-307P-201ENST00000516743 106 ntBASIC5.81□□□□□ -1.48
SIX5Q8N196 RNU6-1271P-201ENST00000517049 105 ntBASIC5.81□□□□□ -1.48
SIX5Q8N196 AC105031.1-201ENST00000518550 476 ntBASIC5.81□□□□□ -1.48
SIX5Q8N196 CYCSP27-201ENST00000527643 293 ntBASIC5.81□□□□□ -1.48
SIX5Q8N196 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC5.81□□□□□ -1.48
SIX5Q8N196 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.81□□□□□ -1.48
SIX5Q8N196 AC026371.1-201ENST00000551867 419 ntBASIC5.81□□□□□ -1.48
SIX5Q8N196 AC007494.1-201ENST00000562293 760 ntBASIC5.81□□□□□ -1.48
SIX5Q8N196 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.81□□□□□ -1.48
SIX5Q8N196 AL669831.4-202ENST00000590817 238 ntBASIC5.81□□□□□ -1.48
SIX5Q8N196 AC174048.1-201ENST00000603389 144 ntBASIC5.81□□□□□ -1.48
SIX5Q8N196 AC090607.5-201ENST00000615692 224 ntBASIC5.81□□□□□ -1.48
SIX5Q8N196 AL732372.2-225ENST00000642124 456 ntBASIC5.81□□□□□ -1.48
SIX5Q8N196 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.81□□□□□ -1.48
SIX5Q8N196 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
SIX5Q8N196 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
SIX5Q8N196 AL731532.1-201ENST00000623972 4236 ntBASIC5.81□□□□□ -1.48
SIX5Q8N196 CDC27P3-201ENST00000635418 1910 ntBASIC5.81□□□□□ -1.48
SIX5Q8N196 THAP12P9-201ENST00000503971 2360 ntBASIC5.81□□□□□ -1.48
SIX5Q8N196 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.81□□□□□ -1.48
SIX5Q8N196 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SIX5Q8N196 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SIX5Q8N196 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SIX5Q8N196 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.81□□□□□ -1.48
SIX5Q8N196 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
SIX5Q8N196 BCORP1-203ENST00000513194 5093 ntBASIC5.81□□□□□ -1.48
SIX5Q8N196 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SIX5Q8N196 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SIX5Q8N196 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SIX5Q8N196 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SIX5Q8N196 BTBD10P1-201ENST00000549824 1352 ntBASIC5.8□□□□□ -1.48
SIX5Q8N196 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SIX5Q8N196 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
SIX5Q8N196 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.8□□□□□ -1.48
SIX5Q8N196 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
SIX5Q8N196 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SIX5Q8N196 AL022311.1-201ENST00000623726 19416 ntBASIC5.8□□□□□ -1.48
SIX5Q8N196 Y_RNA.428-201ENST00000384078 102 ntBASIC5.8□□□□□ -1.48
SIX5Q8N196 RNU6-214P-201ENST00000384130 107 ntBASIC5.8□□□□□ -1.48
SIX5Q8N196 Y_RNA.473-201ENST00000384333 102 ntBASIC5.8□□□□□ -1.48
SIX5Q8N196 RNU6-178P-201ENST00000384631 104 ntBASIC5.8□□□□□ -1.48
SIX5Q8N196 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SIX5Q8N196 RPS4XP7-201ENST00000406274 780 ntBASIC5.8□□□□□ -1.48
SIX5Q8N196 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.8□□□□□ -1.48
SIX5Q8N196 AC016712.1-201ENST00000431088 378 ntBASIC5.8□□□□□ -1.48
SIX5Q8N196 AC073410.1-201ENST00000435125 589 ntBASIC5.8□□□□□ -1.48
SIX5Q8N196 RPL12P46-201ENST00000436610 195 ntBASIC5.8□□□□□ -1.48
SIX5Q8N196 GSTA11P-201ENST00000452866 669 ntBASIC5.8□□□□□ -1.48
SIX5Q8N196 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC5.8□□□□□ -1.48
SIX5Q8N196 AC117503.1-201ENST00000472241 394 ntBASIC5.8□□□□□ -1.48
SIX5Q8N196 AC007686.1-201ENST00000488511 463 ntBASIC5.8□□□□□ -1.48
SIX5Q8N196 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC5.8□□□□□ -1.48
SIX5Q8N196 AC097486.1-201ENST00000515331 210 ntBASIC5.8□□□□□ -1.48
SIX5Q8N196 RNU6-635P-201ENST00000516651 102 ntBASIC5.8□□□□□ -1.48
SIX5Q8N196 SNORD116.3-201ENST00000517176 78 ntBASIC5.8□□□□□ -1.48
SIX5Q8N196 AC087854.1-201ENST00000519706 414 ntBASIC5.8□□□□□ -1.48
SIX5Q8N196 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC5.8□□□□□ -1.48
SIX5Q8N196 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.8□□□□□ -1.48
SIX5Q8N196 AC012616.1-201ENST00000600294 197 ntBASIC5.8□□□□□ -1.48
SIX5Q8N196 AC000068.2-201ENST00000608816 460 ntBASIC5.8□□□□□ -1.48
SIX5Q8N196 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.8□□□□□ -1.48
SIX5Q8N196 AL118522.2-201ENST00000616045 615 ntBASIC5.8□□□□□ -1.48
SIX5Q8N196 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.8□□□□□ -1.48
SIX5Q8N196 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.8□□□□□ -1.48
SIX5Q8N196 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
SIX5Q8N196 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.8□□□□□ -1.48
SIX5Q8N196 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
SIX5Q8N196 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.8□□□□□ -1.48
SIX5Q8N196 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC5.8□□□□□ -1.48
SIX5Q8N196 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SIX5Q8N196 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
SIX5Q8N196 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SIX5Q8N196 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.79□□□□□ -1.48
SIX5Q8N196 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
SIX5Q8N196 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.79□□□□□ -1.48
SIX5Q8N196 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
SIX5Q8N196 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SIX5Q8N196 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SIX5Q8N196 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SIX5Q8N196 AC013442.1-201ENST00000397347 228 ntBASIC5.79□□□□□ -1.48
SIX5Q8N196 AL109941.1-201ENST00000401925 229 ntBASIC5.79□□□□□ -1.48
SIX5Q8N196 RNA5SP56-201ENST00000410277 118 ntBASIC5.79□□□□□ -1.48
SIX5Q8N196 DPH3P2-201ENST00000422618 250 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms