Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 AL121882.1-201ENST00000422893 417 ntBASIC3.67□□□□□ -1.82
PTCH1Q13635 HMGB1P45-201ENST00000435986 653 ntBASIC3.67□□□□□ -1.82
PTCH1Q13635 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.67□□□□□ -1.82
PTCH1Q13635 RNF138P1-201ENST00000502765 546 ntBASIC3.67□□□□□ -1.82
PTCH1Q13635 TRAV31-201ENST00000502780 342 ntBASIC3.67□□□□□ -1.82
PTCH1Q13635 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
PTCH1Q13635 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.67□□□□□ -1.82
PTCH1Q13635 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.67□□□□□ -1.82
PTCH1Q13635 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.67□□□□□ -1.82
PTCH1Q13635 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.67□□□□□ -1.82
PTCH1Q13635 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.67□□□□□ -1.82
PTCH1Q13635 AC079228.1-201ENST00000624774 1049 ntBASIC3.67□□□□□ -1.82
PTCH1Q13635 AL356118.1-201ENST00000635272 1078 ntBASIC3.67□□□□□ -1.82
PTCH1Q13635 AL163152.1-201ENST00000642001 374 ntBASIC3.67□□□□□ -1.82
PTCH1Q13635 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PTCH1Q13635 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PTCH1Q13635 AC008432.1-201ENST00000615912 1320 ntBASIC3.67□□□□□ -1.82
PTCH1Q13635 MFSD8-213ENST00000641134 1327 ntBASIC3.67□□□□□ -1.82
PTCH1Q13635 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.67□□□□□ -1.82
PTCH1Q13635 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PTCH1Q13635 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PTCH1Q13635 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PTCH1Q13635 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
PTCH1Q13635 SNORD56.4-201ENST00000363883 71 ntBASIC3.66□□□□□ -1.82
PTCH1Q13635 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PTCH1Q13635 MIR181B1-201ENST00000385240 110 ntBASIC3.66□□□□□ -1.82
PTCH1Q13635 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PTCH1Q13635 RPL31P2-201ENST00000413849 377 ntBASIC3.66□□□□□ -1.82
PTCH1Q13635 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.66□□□□□ -1.82
PTCH1Q13635 HMGN2P3-201ENST00000433603 273 ntBASIC3.66□□□□□ -1.82
PTCH1Q13635 VDAC1P3-201ENST00000434069 851 ntBASIC3.66□□□□□ -1.82
PTCH1Q13635 HMGN2P5-201ENST00000436882 273 ntBASIC3.66□□□□□ -1.82
PTCH1Q13635 RNU6-202P-201ENST00000515998 96 ntBASIC3.66□□□□□ -1.82
PTCH1Q13635 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.66□□□□□ -1.82
PTCH1Q13635 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.66□□□□□ -1.82
PTCH1Q13635 AGGF1P8-201ENST00000562979 1000 ntBASIC3.66□□□□□ -1.82
PTCH1Q13635 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.66□□□□□ -1.82
PTCH1Q13635 AC055876.1-202ENST00000567053 138 ntBASIC3.66□□□□□ -1.82
PTCH1Q13635 MIR3186-201ENST00000577404 85 ntBASIC3.66□□□□□ -1.82
PTCH1Q13635 OR4G1P-201ENST00000588632 938 ntBASIC3.66□□□□□ -1.82
PTCH1Q13635 SNRPGP15-201ENST00000600149 222 ntBASIC3.66□□□□□ -1.82
PTCH1Q13635 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.66□□□□□ -1.82
PTCH1Q13635 AC099063.3-201ENST00000642066 185 ntBASIC3.66□□□□□ -1.82
PTCH1Q13635 MTCO1P6-201ENST00000481192 1384 ntBASIC3.66□□□□□ -1.82
PTCH1Q13635 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
PTCH1Q13635 SNORD6-201ENST00000365444 73 ntBASIC3.65□□□□□ -1.83
PTCH1Q13635 RNU6-1151P-201ENST00000384684 107 ntBASIC3.65□□□□□ -1.83
PTCH1Q13635 AL121972.1-201ENST00000402023 252 ntBASIC3.65□□□□□ -1.83
PTCH1Q13635 UBE2V1P9-201ENST00000414760 368 ntBASIC3.65□□□□□ -1.83
PTCH1Q13635 YPEL5P1-201ENST00000419731 367 ntBASIC3.65□□□□□ -1.83
PTCH1Q13635 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.65□□□□□ -1.83
PTCH1Q13635 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.65□□□□□ -1.83
PTCH1Q13635 AL500527.1-201ENST00000448532 255 ntBASIC3.65□□□□□ -1.83
PTCH1Q13635 OR6K1P-201ENST00000456766 971 ntBASIC3.65□□□□□ -1.83
PTCH1Q13635 CEACAMP4-201ENST00000457676 421 ntBASIC3.65□□□□□ -1.83
PTCH1Q13635 RNU7-170P-201ENST00000459303 61 ntBASIC3.65□□□□□ -1.83
PTCH1Q13635 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.65□□□□□ -1.83
PTCH1Q13635 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.65□□□□□ -1.83
PTCH1Q13635 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.65□□□□□ -1.83
PTCH1Q13635 RNU6-1102P-201ENST00000516149 96 ntBASIC3.65□□□□□ -1.83
PTCH1Q13635 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.65□□□□□ -1.83
PTCH1Q13635 SNRPGP1-201ENST00000553864 222 ntBASIC3.65□□□□□ -1.83
PTCH1Q13635 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.65□□□□□ -1.83
PTCH1Q13635 MIR3605-201ENST00000583214 100 ntBASIC3.65□□□□□ -1.83
PTCH1Q13635 MIR4635-201ENST00000583759 79 ntBASIC3.65□□□□□ -1.83
PTCH1Q13635 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.65□□□□□ -1.83
PTCH1Q13635 BNIP3P4-201ENST00000604946 565 ntBASIC3.65□□□□□ -1.83
PTCH1Q13635 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
PTCH1Q13635 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.64□□□□□ -1.83
PTCH1Q13635 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PTCH1Q13635 AC004925.1-201ENST00000624256 2706 ntBASIC3.64□□□□□ -1.83
PTCH1Q13635 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PTCH1Q13635 SNORA7.2-201ENST00000364446 145 ntBASIC3.64□□□□□ -1.83
PTCH1Q13635 SNORA51.2-201ENST00000364595 132 ntBASIC3.64□□□□□ -1.83
PTCH1Q13635 MIR607-201ENST00000385241 96 ntBASIC3.64□□□□□ -1.83
PTCH1Q13635 SSXP10-201ENST00000402595 565 ntBASIC3.64□□□□□ -1.83
PTCH1Q13635 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.64□□□□□ -1.83
PTCH1Q13635 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PTCH1Q13635 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.64□□□□□ -1.83
PTCH1Q13635 FAM172BP-201ENST00000487497 1089 ntBASIC3.64□□□□□ -1.83
PTCH1Q13635 AC092436.1-201ENST00000506450 503 ntBASIC3.64□□□□□ -1.83
PTCH1Q13635 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.64□□□□□ -1.83
PTCH1Q13635 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.64□□□□□ -1.83
PTCH1Q13635 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.64□□□□□ -1.83
PTCH1Q13635 AC083760.1-201ENST00000589621 670 ntBASIC3.64□□□□□ -1.83
PTCH1Q13635 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.64□□□□□ -1.83
PTCH1Q13635 AL671309.1-201ENST00000603750 544 ntBASIC3.64□□□□□ -1.83
PTCH1Q13635 AC021851.1-201ENST00000608537 1082 ntBASIC3.64□□□□□ -1.83
PTCH1Q13635 AC012531.5-201ENST00000611375 151 ntBASIC3.64□□□□□ -1.83
PTCH1Q13635 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PTCH1Q13635 Z99129.2-201ENST00000619967 314 ntBASIC3.64□□□□□ -1.83
PTCH1Q13635 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.64□□□□□ -1.83
PTCH1Q13635 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
PTCH1Q13635 AF127577.6-201ENST00000623352 2191 ntBASIC3.64□□□□□ -1.83
PTCH1Q13635 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
PTCH1Q13635 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.63□□□□□ -1.83
PTCH1Q13635 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PTCH1Q13635 RNU4-26P-201ENST00000410270 107 ntBASIC3.63□□□□□ -1.83
PTCH1Q13635 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.63□□□□□ -1.83
PTCH1Q13635 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 179.3 ms