Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.13□□□□□ -2.07
HTTP42858 CDC42P1-201ENST00000456658 548 ntBASIC2.13□□□□□ -2.07
HTTP42858 PPP1R2P5-201ENST00000457256 603 ntBASIC2.13□□□□□ -2.07
HTTP42858 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.13□□□□□ -2.07
HTTP42858 RNA5SP102-201ENST00000516865 106 ntBASIC2.13□□□□□ -2.07
HTTP42858 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.13□□□□□ -2.07
HTTP42858 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.13□□□□□ -2.07
HTTP42858 AC006116.7-201ENST00000590141 756 ntBASIC2.13□□□□□ -2.07
HTTP42858 AC068790.3-201ENST00000602988 553 ntBASIC2.13□□□□□ -2.07
HTTP42858 RPAP2P1-201ENST00000603626 1168 ntBASIC2.13□□□□□ -2.07
HTTP42858 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
HTTP42858 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
HTTP42858 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
HTTP42858 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HTTP42858 RNU4-74P-201ENST00000411280 161 ntBASIC2.12□□□□□ -2.07
HTTP42858 AMD1P2-201ENST00000412936 992 ntBASIC2.12□□□□□ -2.07
HTTP42858 RPL7P37-201ENST00000425095 738 ntBASIC2.12□□□□□ -2.07
HTTP42858 PTP4A1P6-201ENST00000531034 478 ntBASIC2.12□□□□□ -2.07
HTTP42858 AL354943.1-201ENST00000572103 781 ntBASIC2.12□□□□□ -2.07
HTTP42858 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
HTTP42858 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
HTTP42858 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
HTTP42858 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC2.12□□□□□ -2.07
HTTP42858 HMGN1P33-201ENST00000432945 451 ntBASIC2.12□□□□□ -2.07
HTTP42858 BX322784.1-201ENST00000455793 1077 ntBASIC2.12□□□□□ -2.07
HTTP42858 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.12□□□□□ -2.07
HTTP42858 IGHV3-76-201ENST00000522465 295 ntBASIC2.12□□□□□ -2.07
HTTP42858 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.12□□□□□ -2.07
HTTP42858 AP000889.2-201ENST00000532684 490 ntBASIC2.12□□□□□ -2.07
HTTP42858 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC2.12□□□□□ -2.07
HTTP42858 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
HTTP42858 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
HTTP42858 FO393414.1-201ENST00000428697 1184 ntBASIC2.11□□□□□ -2.07
HTTP42858 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC2.11□□□□□ -2.07
HTTP42858 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.11□□□□□ -2.07
HTTP42858 AC078899.5-201ENST00000612475 178 ntBASIC2.11□□□□□ -2.07
HTTP42858 MIR7153-201ENST00000637758 57 ntBASIC2.11□□□□□ -2.07
HTTP42858 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.07
HTTP42858 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
HTTP42858 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
HTTP42858 RNU1-87P-201ENST00000363727 170 ntBASIC2.11□□□□□ -2.07
HTTP42858 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.11□□□□□ -2.07
HTTP42858 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.11□□□□□ -2.07
HTTP42858 AP000787.2-201ENST00000604432 568 ntBASIC2.11□□□□□ -2.07
HTTP42858 HMGN2P28-201ENST00000606102 262 ntBASIC2.11□□□□□ -2.07
HTTP42858 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.11□□□□□ -2.07
HTTP42858 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
HTTP42858 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
HTTP42858 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
HTTP42858 ERHP2-201ENST00000402323 299 ntBASIC2.11□□□□□ -2.07
HTTP42858 AL390023.1-201ENST00000428836 262 ntBASIC2.11□□□□□ -2.07
HTTP42858 AC092473.1-201ENST00000441098 221 ntBASIC2.11□□□□□ -2.07
HTTP42858 PSMA3P-201ENST00000555485 635 ntBASIC2.11□□□□□ -2.07
HTTP42858 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.11□□□□□ -2.07
HTTP42858 MIR4452-201ENST00000583004 71 ntBASIC2.11□□□□□ -2.07
HTTP42858 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC2.11□□□□□ -2.07
HTTP42858 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.1□□□□□ -2.07
HTTP42858 AC022709.1-201ENST00000615967 87 ntBASIC2.1□□□□□ -2.07
HTTP42858 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
HTTP42858 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.1□□□□□ -2.07
HTTP42858 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC2.1□□□□□ -2.07
HTTP42858 SSXP1-201ENST00000453640 473 ntBASIC2.1□□□□□ -2.07
HTTP42858 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.1□□□□□ -2.07
HTTP42858 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC2.1□□□□□ -2.07
HTTP42858 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.1□□□□□ -2.07
HTTP42858 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
HTTP42858 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
HTTP42858 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.1□□□□□ -2.07
HTTP42858 AL359740.1-201ENST00000624340 592 ntBASIC2.1□□□□□ -2.07
HTTP42858 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
HTTP42858 AC103988.1-201ENST00000566382 2177 ntBASIC2.1□□□□□ -2.07
HTTP42858 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
HTTP42858 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.09□□□□□ -2.07
HTTP42858 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.09□□□□□ -2.07
HTTP42858 MIR4285-201ENST00000581001 85 ntBASIC2.09□□□□□ -2.07
HTTP42858 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC2.09□□□□□ -2.07
HTTP42858 AC234781.4-201ENST00000419384 244 ntBASIC2.09□□□□□ -2.08
HTTP42858 HMGB1P27-201ENST00000431429 603 ntBASIC2.09□□□□□ -2.08
HTTP42858 TOMM22P6-201ENST00000465035 409 ntBASIC2.09□□□□□ -2.08
HTTP42858 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.09□□□□□ -2.08
HTTP42858 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.09□□□□□ -2.08
HTTP42858 AL353748.2-201ENST00000622148 471 ntBASIC2.09□□□□□ -2.08
HTTP42858 MIR3199-2-201ENST00000636243 86 ntBASIC2.09□□□□□ -2.08
HTTP42858 AC233981.2-201ENST00000611524 1614 ntBASIC2.09□□□□□ -2.08
HTTP42858 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.09□□□□□ -2.08
HTTP42858 PNPT1P2-201ENST00000456768 2050 ntBASIC2.09□□□□□ -2.08
HTTP42858 Y_RNA.191-201ENST00000363972 113 ntBASIC2.08□□□□□ -2.08
HTTP42858 RNU6-316P-201ENST00000391027 107 ntBASIC2.08□□□□□ -2.08
HTTP42858 AC013404.1-201ENST00000413068 249 ntBASIC2.08□□□□□ -2.08
HTTP42858 RPL23AP39-201ENST00000415533 405 ntBASIC2.08□□□□□ -2.08
HTTP42858 AL591704.1-201ENST00000432574 275 ntBASIC2.08□□□□□ -2.08
HTTP42858 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC2.08□□□□□ -2.08
HTTP42858 AC108734.3-201ENST00000481241 1165 ntBASIC2.08□□□□□ -2.08
HTTP42858 PVT1_3.1-201ENST00000620853 95 ntBASIC2.08□□□□□ -2.08
HTTP42858 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
HTTP42858 MIR96-201ENST00000362288 78 ntBASIC2.08□□□□□ -2.08
HTTP42858 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
HTTP42858 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.08□□□□□ -2.08
HTTP42858 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
HTTP42858 AC012119.1-201ENST00000603184 222 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms