Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LMNB1P20700 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LMNB1P20700 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.69□□□□□ -1.5
LMNB1P20700 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LMNB1P20700 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
LMNB1P20700 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.68□□□□□ -1.5
LMNB1P20700 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
LMNB1P20700 MTND5P28-201ENST00000438005 1594 ntBASIC5.68□□□□□ -1.5
LMNB1P20700 Y_RNA.157-201ENST00000363638 102 ntBASIC5.68□□□□□ -1.5
LMNB1P20700 Y_RNA.166-201ENST00000363730 102 ntBASIC5.68□□□□□ -1.5
LMNB1P20700 MIR659-201ENST00000384963 97 ntBASIC5.68□□□□□ -1.5
LMNB1P20700 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LMNB1P20700 RPL7P60-201ENST00000397636 735 ntBASIC5.68□□□□□ -1.5
LMNB1P20700 U3.32-201ENST00000408116 212 ntBASIC5.68□□□□□ -1.5
LMNB1P20700 AL354751.2-201ENST00000415471 210 ntBASIC5.68□□□□□ -1.5
LMNB1P20700 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC5.68□□□□□ -1.5
LMNB1P20700 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.68□□□□□ -1.5
LMNB1P20700 GPR143P-201ENST00000434155 205 ntBASIC5.68□□□□□ -1.5
LMNB1P20700 AC092013.1-201ENST00000438795 332 ntBASIC5.68□□□□□ -1.5
LMNB1P20700 AL138799.3-201ENST00000438968 350 ntBASIC5.68□□□□□ -1.5
LMNB1P20700 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.68□□□□□ -1.5
LMNB1P20700 CBWD4P-201ENST00000445695 655 ntBASIC5.68□□□□□ -1.5
LMNB1P20700 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.68□□□□□ -1.5
LMNB1P20700 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC5.68□□□□□ -1.5
LMNB1P20700 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.68□□□□□ -1.5
LMNB1P20700 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC5.68□□□□□ -1.5
LMNB1P20700 HMGN1P13-201ENST00000505795 138 ntBASIC5.68□□□□□ -1.5
LMNB1P20700 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC5.68□□□□□ -1.5
LMNB1P20700 ENPP7P11-201ENST00000505915 627 ntBASIC5.68□□□□□ -1.5
LMNB1P20700 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.68□□□□□ -1.5
LMNB1P20700 PARP4P3-201ENST00000510265 317 ntBASIC5.68□□□□□ -1.5
LMNB1P20700 AC021146.1-201ENST00000511202 716 ntBASIC5.68□□□□□ -1.5
LMNB1P20700 AC093853.1-201ENST00000515689 483 ntBASIC5.68□□□□□ -1.5
LMNB1P20700 RNU1-45P-201ENST00000517191 141 ntBASIC5.68□□□□□ -1.5
LMNB1P20700 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC5.68□□□□□ -1.5
LMNB1P20700 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC5.68□□□□□ -1.5
LMNB1P20700 PSMA2P1-201ENST00000526365 646 ntBASIC5.68□□□□□ -1.5
LMNB1P20700 AC243972.3-201ENST00000539655 198 ntBASIC5.68□□□□□ -1.5
LMNB1P20700 AC023050.3-201ENST00000541142 333 ntBASIC5.68□□□□□ -1.5
LMNB1P20700 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.68□□□□□ -1.5
LMNB1P20700 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC5.68□□□□□ -1.5
LMNB1P20700 AC022884.2-201ENST00000578535 580 ntBASIC5.68□□□□□ -1.5
LMNB1P20700 MIR3146-201ENST00000580367 79 ntBASIC5.68□□□□□ -1.5
LMNB1P20700 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC5.68□□□□□ -1.5
LMNB1P20700 AC010525.2-201ENST00000590920 195 ntBASIC5.68□□□□□ -1.5
LMNB1P20700 YWHAQP7-201ENST00000603536 658 ntBASIC5.68□□□□□ -1.5
LMNB1P20700 AC013553.2-201ENST00000604244 589 ntBASIC5.68□□□□□ -1.5
LMNB1P20700 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.68□□□□□ -1.5
LMNB1P20700 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LMNB1P20700 AC090971.4-201ENST00000560291 1800 ntBASIC5.68□□□□□ -1.5
LMNB1P20700 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
LMNB1P20700 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LMNB1P20700 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.68□□□□□ -1.5
LMNB1P20700 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
LMNB1P20700 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.68□□□□□ -1.5
LMNB1P20700 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LMNB1P20700 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LMNB1P20700 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
LMNB1P20700 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LMNB1P20700 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
LMNB1P20700 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
LMNB1P20700 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LMNB1P20700 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.67□□□□□ -1.5
LMNB1P20700 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC5.67□□□□□ -1.5
LMNB1P20700 SNRPFP1-201ENST00000414761 252 ntBASIC5.67□□□□□ -1.5
LMNB1P20700 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.67□□□□□ -1.5
LMNB1P20700 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC5.67□□□□□ -1.5
LMNB1P20700 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.67□□□□□ -1.5
LMNB1P20700 AL451139.1-201ENST00000434718 346 ntBASIC5.67□□□□□ -1.5
LMNB1P20700 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LMNB1P20700 AC104651.2-201ENST00000447549 528 ntBASIC5.67□□□□□ -1.5
LMNB1P20700 RN7SL517P-201ENST00000462240 305 ntBASIC5.67□□□□□ -1.5
LMNB1P20700 AP001992.1-205ENST00000462248 379 ntBASIC5.67□□□□□ -1.5
LMNB1P20700 RPL7L1P8-201ENST00000469911 741 ntBASIC5.67□□□□□ -1.5
LMNB1P20700 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LMNB1P20700 AC112206.3-201ENST00000514578 389 ntBASIC5.67□□□□□ -1.5
LMNB1P20700 RNU6-709P-201ENST00000517257 104 ntBASIC5.67□□□□□ -1.5
LMNB1P20700 AC105029.1-201ENST00000520250 669 ntBASIC5.67□□□□□ -1.5
LMNB1P20700 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.67□□□□□ -1.5
LMNB1P20700 AC093249.4-201ENST00000564755 259 ntBASIC5.67□□□□□ -1.5
LMNB1P20700 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.67□□□□□ -1.5
LMNB1P20700 AC022432.1-201ENST00000595739 310 ntBASIC5.67□□□□□ -1.5
LMNB1P20700 VN1R80P-201ENST00000597126 338 ntBASIC5.67□□□□□ -1.5
LMNB1P20700 AC123786.2-201ENST00000603459 275 ntBASIC5.67□□□□□ -1.5
LMNB1P20700 AC090574.1-201ENST00000623186 233 ntBASIC5.67□□□□□ -1.5
LMNB1P20700 ADAM5-202ENST00000399789 1942 ntBASIC5.67□□□□□ -1.5
LMNB1P20700 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LMNB1P20700 AC114546.3-201ENST00000623582 1734 ntBASIC5.67□□□□□ -1.5
LMNB1P20700 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
LMNB1P20700 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LMNB1P20700 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LMNB1P20700 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.67□□□□□ -1.5
LMNB1P20700 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LMNB1P20700 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LMNB1P20700 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LMNB1P20700 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LMNB1P20700 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LMNB1P20700 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.66□□□□□ -1.5
LMNB1P20700 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LMNB1P20700 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms