Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 RPS4XP10-201ENST00000465034 731 ntBASIC1.96□□□□□ -2.1
CXCL1P09341 AC079804.2-201ENST00000490376 200 ntBASIC1.96□□□□□ -2.1
CXCL1P09341 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC1.96□□□□□ -2.1
CXCL1P09341 AC023632.4-201ENST00000517783 191 ntBASIC1.96□□□□□ -2.1
CXCL1P09341 HMGB1P23-201ENST00000518743 568 ntBASIC1.96□□□□□ -2.1
CXCL1P09341 AP003467.2-201ENST00000520175 319 ntBASIC1.96□□□□□ -2.1
CXCL1P09341 MTCO1P47-201ENST00000523889 1271 ntBASIC1.96□□□□□ -2.1
CXCL1P09341 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC1.96□□□□□ -2.1
CXCL1P09341 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.96□□□□□ -2.1
CXCL1P09341 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC1.96□□□□□ -2.1
CXCL1P09341 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.96□□□□□ -2.1
CXCL1P09341 ARL1-211ENST00000551828 776 ntTSL 5 BASIC1.96□□□□□ -2.1
CXCL1P09341 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC1.96□□□□□ -2.1
CXCL1P09341 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.96□□□□□ -2.1
CXCL1P09341 AC017100.2-201ENST00000584628 355 ntBASIC1.96□□□□□ -2.1
CXCL1P09341 AP001330.4-201ENST00000604350 154 ntBASIC1.96□□□□□ -2.1
CXCL1P09341 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.96□□□□□ -2.1
CXCL1P09341 AC018926.3-201ENST00000618841 406 ntBASIC1.96□□□□□ -2.1
CXCL1P09341 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC1.96□□□□□ -2.1
CXCL1P09341 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1.96□□□□□ -2.1
CXCL1P09341 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC1.96□□□□□ -2.1
CXCL1P09341 U6.107-201ENST00000637108 79 ntBASIC1.96□□□□□ -2.1
CXCL1P09341 AL049780.3-201ENST00000624612 1583 ntBASIC1.96□□□□□ -2.1
CXCL1P09341 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC1.96□□□□□ -2.1
CXCL1P09341 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CXCL1P09341 CKAP2P1-201ENST00000555477 2049 ntBASIC1.95□□□□□ -2.1
CXCL1P09341 AL139276.1-201ENST00000311910 1001 ntBASIC1.95□□□□□ -2.1
CXCL1P09341 RNA5SP72-201ENST00000364442 117 ntBASIC1.95□□□□□ -2.1
CXCL1P09341 SNORA67.1-201ENST00000364749 141 ntBASIC1.95□□□□□ -2.1
CXCL1P09341 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC1.95□□□□□ -2.1
CXCL1P09341 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
CXCL1P09341 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC1.95□□□□□ -2.1
CXCL1P09341 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
CXCL1P09341 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CXCL1P09341 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC1.95□□□□□ -2.1
CXCL1P09341 RPS15AP38-201ENST00000413110 372 ntBASIC1.95□□□□□ -2.1
CXCL1P09341 VTA1P1-201ENST00000414044 866 ntBASIC1.95□□□□□ -2.1
CXCL1P09341 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.95□□□□□ -2.1
CXCL1P09341 AC114973.1-201ENST00000429057 632 ntBASIC1.95□□□□□ -2.1
CXCL1P09341 AC092427.1-202ENST00000430569 476 ntBASIC1.95□□□□□ -2.1
CXCL1P09341 AL590762.3-201ENST00000436372 640 ntBASIC1.95□□□□□ -2.1
CXCL1P09341 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC1.95□□□□□ -2.1
CXCL1P09341 AC004865.1-201ENST00000442276 1003 ntBASIC1.95□□□□□ -2.1
CXCL1P09341 AC097499.1-201ENST00000444277 208 ntBASIC1.95□□□□□ -2.1
CXCL1P09341 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC1.95□□□□□ -2.1
CXCL1P09341 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC1.95□□□□□ -2.1
CXCL1P09341 AL671855.1-201ENST00000446875 1203 ntBASIC1.95□□□□□ -2.1
CXCL1P09341 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC1.95□□□□□ -2.1
CXCL1P09341 RN7SL504P-201ENST00000494496 287 ntBASIC1.95□□□□□ -2.1
CXCL1P09341 AC008716.1-201ENST00000511084 513 ntBASIC1.95□□□□□ -2.1
CXCL1P09341 HMGB1P47-201ENST00000511281 589 ntBASIC1.95□□□□□ -2.1
CXCL1P09341 RNU1-104P-201ENST00000517280 175 ntBASIC1.95□□□□□ -2.1
CXCL1P09341 AP001804.3-201ENST00000525146 880 ntBASIC1.95□□□□□ -2.1
CXCL1P09341 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CXCL1P09341 AC007954.1-201ENST00000554198 494 ntBASIC1.95□□□□□ -2.1
CXCL1P09341 AC053481.3-201ENST00000577881 843 ntBASIC1.95□□□□□ -2.1
CXCL1P09341 AC079880.2-201ENST00000603790 1213 ntBASIC1.95□□□□□ -2.1
CXCL1P09341 HSPE1P7-201ENST00000604681 321 ntBASIC1.95□□□□□ -2.1
CXCL1P09341 AC013468.1-201ENST00000608680 598 ntBASIC1.95□□□□□ -2.1
CXCL1P09341 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC1.95□□□□□ -2.1
CXCL1P09341 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC1.95□□□□□ -2.1
CXCL1P09341 TEX41-300ENST00000631048 69 ntTSL 5 BASIC1.95□□□□□ -2.1
CXCL1P09341 AC110079.1-202ENST00000635213 138 ntBASIC1.95□□□□□ -2.1
CXCL1P09341 AP000553.5-201ENST00000641933 54 ntBASIC1.95□□□□□ -2.1
CXCL1P09341 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CXCL1P09341 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CXCL1P09341 AC008669.1-201ENST00000565823 2178 ntBASIC1.95□□□□□ -2.1
CXCL1P09341 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CXCL1P09341 AC010680.1-201ENST00000590024 3590 ntBASIC1.94□□□□□ -2.1
CXCL1P09341 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CXCL1P09341 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
CXCL1P09341 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
CXCL1P09341 RNA5SP479-201ENST00000364858 117 ntBASIC1.94□□□□□ -2.1
CXCL1P09341 SNORA62.3-201ENST00000365110 153 ntBASIC1.94□□□□□ -2.1
CXCL1P09341 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
CXCL1P09341 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC1.94□□□□□ -2.1
CXCL1P09341 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.94□□□□□ -2.1
CXCL1P09341 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.94□□□□□ -2.1
CXCL1P09341 ERMN-204ENST00000409925 556 ntTSL 4 BASIC1.94□□□□□ -2.1
CXCL1P09341 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC1.94□□□□□ -2.1
CXCL1P09341 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC1.94□□□□□ -2.1
CXCL1P09341 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
CXCL1P09341 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC1.94□□□□□ -2.1
CXCL1P09341 AC011816.1-201ENST00000441346 546 ntBASIC1.94□□□□□ -2.1
CXCL1P09341 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.94□□□□□ -2.1
CXCL1P09341 AC092685.1-201ENST00000447960 1243 ntBASIC1.94□□□□□ -2.1
CXCL1P09341 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC1.94□□□□□ -2.1
CXCL1P09341 AL359385.1-201ENST00000456509 365 ntBASIC1.94□□□□□ -2.1
CXCL1P09341 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC1.94□□□□□ -2.1
CXCL1P09341 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC1.94□□□□□ -2.1
CXCL1P09341 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CXCL1P09341 AC112673.1-201ENST00000513168 575 ntBASIC1.94□□□□□ -2.1
CXCL1P09341 PRELID3BP4-201ENST00000515476 571 ntBASIC1.94□□□□□ -2.1
CXCL1P09341 RNU6-488P-201ENST00000515918 99 ntBASIC1.94□□□□□ -2.1
CXCL1P09341 SNORA31.13-201ENST00000516624 135 ntBASIC1.94□□□□□ -2.1
CXCL1P09341 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC1.94□□□□□ -2.1
CXCL1P09341 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC1.94□□□□□ -2.1
CXCL1P09341 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC1.94□□□□□ -2.1
CXCL1P09341 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CXCL1P09341 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms