Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CHD2O14647 RNU6-819P-201ENST00000364116 107 ntBASIC3.14□□□□□ -1.91
CHD2O14647 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CHD2O14647 HSPE1P26-201ENST00000405341 275 ntBASIC3.14□□□□□ -1.91
CHD2O14647 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.14□□□□□ -1.91
CHD2O14647 AC005912.1-201ENST00000495392 255 ntBASIC3.14□□□□□ -1.91
CHD2O14647 RNU6-295P-201ENST00000516901 104 ntBASIC3.14□□□□□ -1.91
CHD2O14647 AC068339.2-201ENST00000534395 618 ntBASIC3.14□□□□□ -1.91
CHD2O14647 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.14□□□□□ -1.91
CHD2O14647 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.14□□□□□ -1.91
CHD2O14647 MTCO2P22-201ENST00000603246 681 ntBASIC3.14□□□□□ -1.91
CHD2O14647 HMGB1P51-201ENST00000605166 638 ntBASIC3.14□□□□□ -1.91
CHD2O14647 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CHD2O14647 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CHD2O14647 DCAF13P1-201ENST00000495256 1330 ntBASIC3.13□□□□□ -1.91
CHD2O14647 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.13□□□□□ -1.91
CHD2O14647 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC3.13□□□□□ -1.91
CHD2O14647 NPM1P10-201ENST00000398310 865 ntBASIC3.13□□□□□ -1.91
CHD2O14647 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.13□□□□□ -1.91
CHD2O14647 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.13□□□□□ -1.91
CHD2O14647 AC092427.1-202ENST00000430569 476 ntBASIC3.13□□□□□ -1.91
CHD2O14647 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.13□□□□□ -1.91
CHD2O14647 AL645939.1-201ENST00000453429 797 ntBASIC3.13□□□□□ -1.91
CHD2O14647 HMGB1P41-201ENST00000520234 440 ntBASIC3.13□□□□□ -1.91
CHD2O14647 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.13□□□□□ -1.91
CHD2O14647 PCNAP1-202ENST00000595299 752 ntBASIC3.13□□□□□ -1.91
CHD2O14647 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.13□□□□□ -1.91
CHD2O14647 AC105429.2-201ENST00000610567 517 ntBASIC3.13□□□□□ -1.91
CHD2O14647 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.13□□□□□ -1.91
CHD2O14647 AL359893.1-201ENST00000447628 1580 ntBASIC3.13□□□□□ -1.91
CHD2O14647 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
CHD2O14647 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CHD2O14647 FRG1BP-201ENST00000278882 761 ntBASIC3.12□□□□□ -1.91
CHD2O14647 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CHD2O14647 AL138785.1-201ENST00000425821 331 ntBASIC3.12□□□□□ -1.91
CHD2O14647 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.12□□□□□ -1.91
CHD2O14647 MED6P1-201ENST00000439659 713 ntBASIC3.12□□□□□ -1.91
CHD2O14647 AC023512.1-201ENST00000444513 499 ntBASIC3.12□□□□□ -1.91
CHD2O14647 AC008571.1-201ENST00000467232 300 ntBASIC3.12□□□□□ -1.91
CHD2O14647 RPL23AP70-201ENST00000483361 460 ntBASIC3.12□□□□□ -1.91
CHD2O14647 PCNAP1-201ENST00000505363 709 ntBASIC3.12□□□□□ -1.91
CHD2O14647 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.12□□□□□ -1.91
CHD2O14647 GNAI2P1-201ENST00000541815 315 ntBASIC3.12□□□□□ -1.91
CHD2O14647 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.12□□□□□ -1.91
CHD2O14647 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC3.12□□□□□ -1.91
CHD2O14647 AP003072.4-201ENST00000624580 310 ntBASIC3.12□□□□□ -1.91
CHD2O14647 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.12□□□□□ -1.91
CHD2O14647 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CHD2O14647 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CHD2O14647 AL513175.2-201ENST00000422071 443 ntBASIC3.12□□□□□ -1.91
CHD2O14647 Z82205.1-201ENST00000428456 297 ntBASIC3.12□□□□□ -1.91
CHD2O14647 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.12□□□□□ -1.91
CHD2O14647 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.12□□□□□ -1.91
CHD2O14647 AC072039.1-201ENST00000477611 581 ntBASIC3.12□□□□□ -1.91
CHD2O14647 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.12□□□□□ -1.91
CHD2O14647 AC023043.3-201ENST00000593113 385 ntBASIC3.12□□□□□ -1.91
CHD2O14647 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.12□□□□□ -1.91
CHD2O14647 TP73-AS1.1-201ENST00000611447 161 ntBASIC3.12□□□□□ -1.91
CHD2O14647 AC009831.4-201ENST00000620744 325 ntBASIC3.12□□□□□ -1.91
CHD2O14647 PTP4A1P7-201ENST00000423476 514 ntBASIC3.11□□□□□ -1.91
CHD2O14647 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.11□□□□□ -1.91
CHD2O14647 COX6CP2-201ENST00000444980 225 ntBASIC3.11□□□□□ -1.91
CHD2O14647 RPL36AP33-201ENST00000450395 310 ntBASIC3.11□□□□□ -1.91
CHD2O14647 CFTRP1-201ENST00000456646 183 ntBASIC3.11□□□□□ -1.91
CHD2O14647 RNA5SP200-201ENST00000516360 103 ntBASIC3.11□□□□□ -1.91
CHD2O14647 AC067904.2-201ENST00000517322 1283 ntBASIC3.11□□□□□ -1.91
CHD2O14647 NF1P5-201ENST00000588287 448 ntBASIC3.11□□□□□ -1.91
CHD2O14647 AC138473.1-201ENST00000605717 526 ntBASIC3.11□□□□□ -1.91
CHD2O14647 RNA5SP108-201ENST00000605921 117 ntBASIC3.11□□□□□ -1.91
CHD2O14647 AL391834.1-201ENST00000609609 560 ntBASIC3.11□□□□□ -1.91
CHD2O14647 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC3.11□□□□□ -1.91
CHD2O14647 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CHD2O14647 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.1□□□□□ -1.91
CHD2O14647 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CHD2O14647 RNU6-666P-201ENST00000363499 107 ntBASIC3.1□□□□□ -1.91
CHD2O14647 HMGB1P11-201ENST00000413899 637 ntBASIC3.1□□□□□ -1.91
CHD2O14647 RPL30P3-201ENST00000424262 333 ntBASIC3.1□□□□□ -1.91
CHD2O14647 RPS15AP28-201ENST00000435088 386 ntBASIC3.1□□□□□ -1.91
CHD2O14647 AP000705.1-201ENST00000454567 350 ntBASIC3.1□□□□□ -1.91
CHD2O14647 AC087385.1-201ENST00000475062 312 ntBASIC3.1□□□□□ -1.91
CHD2O14647 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.1□□□□□ -1.91
CHD2O14647 SCARNA16.3-201ENST00000516595 184 ntBASIC3.1□□□□□ -1.91
CHD2O14647 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.1□□□□□ -1.91
CHD2O14647 OR6C73P-201ENST00000546432 358 ntBASIC3.1□□□□□ -1.91
CHD2O14647 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.1□□□□□ -1.91
CHD2O14647 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.1□□□□□ -1.91
CHD2O14647 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.1□□□□□ -1.91
CHD2O14647 MIR4458-201ENST00000578872 75 ntBASIC3.1□□□□□ -1.91
CHD2O14647 AC055764.2-201ENST00000610089 670 ntBASIC3.1□□□□□ -1.91
CHD2O14647 MIR8070-201ENST00000616510 88 ntBASIC3.1□□□□□ -1.91
CHD2O14647 AC119674.1-220ENST00000641502 1048 ntBASIC3.1□□□□□ -1.91
CHD2O14647 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.1□□□□□ -1.91
CHD2O14647 U8.9-201ENST00000365667 134 ntBASIC3.09□□□□□ -1.91
CHD2O14647 MIR221-201ENST00000385135 110 ntBASIC3.09□□□□□ -1.91
CHD2O14647 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CHD2O14647 RNU6-321P-201ENST00000410912 106 ntBASIC3.09□□□□□ -1.91
CHD2O14647 SPA17P1-201ENST00000416656 452 ntBASIC3.09□□□□□ -1.91
CHD2O14647 AL096701.2-201ENST00000416920 238 ntBASIC3.09□□□□□ -1.91
CHD2O14647 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.09□□□□□ -1.91
CHD2O14647 AL121578.1-201ENST00000428051 892 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms