Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 PRDX3P3-201ENST00000447765 522 ntBASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 RN7SL221P-201ENST00000466190 281 ntBASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 AC022133.1-201ENST00000490961 571 ntBASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 AC093815.1-201ENST00000508637 280 ntBASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 AC009318.2-201ENST00000610917 651 ntBASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 AC104465.1-201ENST00000611365 139 ntBASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 MIR8076-201ENST00000611401 83 ntBASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 MIR4275-201ENST00000636486 87 ntBASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 AC116667.2-201ENST00000641075 823 ntBASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 AC008725.1-201ENST00000605123 2263 ntBASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
PRDM9Q9NQV7 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 AC090740.1-201ENST00000623193 2262 ntBASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 RPL9P7-201ENST00000330965 580 ntBASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 RNA5SP232-201ENST00000364144 119 ntBASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 RNU6-326P-201ENST00000365480 107 ntBASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 Y_RNA.418-201ENST00000384029 102 ntBASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 RNU6-918P-201ENST00000391219 106 ntBASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 AL513043.1-201ENST00000439124 535 ntBASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 HSPE1P25-201ENST00000455484 251 ntBASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 RANP2-201ENST00000456833 229 ntBASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 RPL9P9-202ENST00000466501 579 ntBASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 ZNF519P4-201ENST00000514008 125 ntBASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 SNORD116-28-201ENST00000516123 91 ntBASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 RNA5SP441-201ENST00000516809 88 ntBASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 RAB9BP1-201ENST00000519581 626 ntBASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 PRPF19P1-201ENST00000584766 898 ntBASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 SMIM12P1-201ENST00000603004 274 ntBASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 AP000787.2-201ENST00000604432 568 ntBASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 AC008555.7-201ENST00000605008 583 ntBASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 AC011921.3-201ENST00000605540 361 ntBASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 uc_338.31-201ENST00000615595 186 ntBASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 RMST_4.1-201ENST00000616886 107 ntBASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 MIR6806-201ENST00000622141 64 ntBASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 AC111152.1-202ENST00000635848 339 ntBASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 AC097063.1-201ENST00000426714 1797 ntBASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PRDM9Q9NQV7 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.91□□□□□ -1.46
PRDM9Q9NQV7 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PRDM9Q9NQV7 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PRDM9Q9NQV7 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
PRDM9Q9NQV7 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PRDM9Q9NQV7 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
PRDM9Q9NQV7 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
PRDM9Q9NQV7 RNU6-288P-201ENST00000363690 104 ntBASIC5.91□□□□□ -1.46
PRDM9Q9NQV7 Y_RNA.343-201ENST00000365354 112 ntBASIC5.91□□□□□ -1.46
PRDM9Q9NQV7 RN7SKP186-201ENST00000365371 303 ntBASIC5.91□□□□□ -1.46
PRDM9Q9NQV7 SNORD78.2-201ENST00000391076 69 ntBASIC5.91□□□□□ -1.46
PRDM9Q9NQV7 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.91□□□□□ -1.46
PRDM9Q9NQV7 RNU6-1135P-201ENST00000411083 103 ntBASIC5.91□□□□□ -1.46
PRDM9Q9NQV7 ALDH7A1P4-201ENST00000412255 178 ntBASIC5.91□□□□□ -1.46
PRDM9Q9NQV7 RPL23AP36-201ENST00000413895 458 ntBASIC5.91□□□□□ -1.46
PRDM9Q9NQV7 AC016769.2-201ENST00000414815 475 ntBASIC5.91□□□□□ -1.46
PRDM9Q9NQV7 AC099677.1-201ENST00000420575 175 ntBASIC5.91□□□□□ -1.46
PRDM9Q9NQV7 RPL30P3-201ENST00000424262 333 ntBASIC5.91□□□□□ -1.46
PRDM9Q9NQV7 AC108479.1-201ENST00000431142 427 ntBASIC5.91□□□□□ -1.46
PRDM9Q9NQV7 GAPDHP59-201ENST00000435908 267 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms