Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 AL035246.1-201ENST00000433554 1255 ntBASIC3.39□□□□□ -1.87
DDX47Q9H0S4 MTND2P20-201ENST00000440805 661 ntBASIC3.39□□□□□ -1.87
DDX47Q9H0S4 ATP5C1P1-201ENST00000441945 895 ntBASIC3.39□□□□□ -1.87
DDX47Q9H0S4 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.39□□□□□ -1.87
DDX47Q9H0S4 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
DDX47Q9H0S4 SSXP4-201ENST00000451349 245 ntBASIC3.39□□□□□ -1.87
DDX47Q9H0S4 OFD1P3Y-201ENST00000453312 783 ntBASIC3.39□□□□□ -1.87
DDX47Q9H0S4 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.39□□□□□ -1.87
DDX47Q9H0S4 AC146507.2-201ENST00000460608 476 ntBASIC3.39□□□□□ -1.87
DDX47Q9H0S4 AC091564.1-201ENST00000464563 479 ntBASIC3.39□□□□□ -1.87
DDX47Q9H0S4 TMEM251P1-201ENST00000503717 318 ntBASIC3.39□□□□□ -1.87
DDX47Q9H0S4 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
DDX47Q9H0S4 MLLT10P2-201ENST00000506434 249 ntBASIC3.39□□□□□ -1.87
DDX47Q9H0S4 HMGB1P28-201ENST00000507778 552 ntBASIC3.39□□□□□ -1.87
DDX47Q9H0S4 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.39□□□□□ -1.87
DDX47Q9H0S4 SAP18P1-201ENST00000512058 390 ntBASIC3.39□□□□□ -1.87
DDX47Q9H0S4 RNU1-61P-201ENST00000516107 151 ntBASIC3.39□□□□□ -1.87
DDX47Q9H0S4 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.39□□□□□ -1.87
DDX47Q9H0S4 AC024224.1-201ENST00000538284 609 ntBASIC3.39□□□□□ -1.87
DDX47Q9H0S4 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.39□□□□□ -1.87
DDX47Q9H0S4 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.39□□□□□ -1.87
DDX47Q9H0S4 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.39□□□□□ -1.87
DDX47Q9H0S4 HSPE1P3-201ENST00000559254 309 ntBASIC3.39□□□□□ -1.87
DDX47Q9H0S4 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.39□□□□□ -1.87
DDX47Q9H0S4 AP001029.3-201ENST00000588063 596 ntBASIC3.39□□□□□ -1.87
DDX47Q9H0S4 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.39□□□□□ -1.87
DDX47Q9H0S4 AC004009.2-201ENST00000623016 728 ntBASIC3.39□□□□□ -1.87
DDX47Q9H0S4 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.39□□□□□ -1.87
DDX47Q9H0S4 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
DDX47Q9H0S4 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
DDX47Q9H0S4 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
DDX47Q9H0S4 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
DDX47Q9H0S4 RNU6-1155P-201ENST00000363554 107 ntBASIC3.38□□□□□ -1.87
DDX47Q9H0S4 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.38□□□□□ -1.87
DDX47Q9H0S4 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
DDX47Q9H0S4 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC3.38□□□□□ -1.87
DDX47Q9H0S4 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.38□□□□□ -1.87
DDX47Q9H0S4 MTND2P5-201ENST00000432656 1006 ntBASIC3.38□□□□□ -1.87
DDX47Q9H0S4 NANOGP2-201ENST00000435391 727 ntBASIC3.38□□□□□ -1.87
DDX47Q9H0S4 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
DDX47Q9H0S4 AC005297.2-201ENST00000450430 606 ntBASIC3.38□□□□□ -1.87
DDX47Q9H0S4 RBMY2UP-201ENST00000453474 324 ntBASIC3.38□□□□□ -1.87
DDX47Q9H0S4 RPL23AP31-201ENST00000456160 467 ntBASIC3.38□□□□□ -1.87
DDX47Q9H0S4 RN7SL75P-201ENST00000461926 281 ntBASIC3.38□□□□□ -1.87
DDX47Q9H0S4 RN7SL542P-201ENST00000467147 294 ntBASIC3.38□□□□□ -1.87
DDX47Q9H0S4 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
DDX47Q9H0S4 ST13P14-201ENST00000474095 734 ntBASIC3.38□□□□□ -1.87
DDX47Q9H0S4 RPS27AP1-201ENST00000475545 471 ntBASIC3.38□□□□□ -1.87
DDX47Q9H0S4 RPL21P131-201ENST00000497298 483 ntBASIC3.38□□□□□ -1.87
DDX47Q9H0S4 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.38□□□□□ -1.87
DDX47Q9H0S4 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.38□□□□□ -1.87
DDX47Q9H0S4 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.38□□□□□ -1.87
DDX47Q9H0S4 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.38□□□□□ -1.87
DDX47Q9H0S4 SNORA31.8-201ENST00000516327 108 ntBASIC3.38□□□□□ -1.87
DDX47Q9H0S4 RNU1-45P-201ENST00000517191 141 ntBASIC3.38□□□□□ -1.87
DDX47Q9H0S4 PAICSP4-201ENST00000517543 1253 ntBASIC3.38□□□□□ -1.87
DDX47Q9H0S4 AC023632.4-201ENST00000517783 191 ntBASIC3.38□□□□□ -1.87
DDX47Q9H0S4 AC021451.1-201ENST00000523498 1129 ntBASIC3.38□□□□□ -1.87
DDX47Q9H0S4 SETP7-201ENST00000552169 453 ntBASIC3.38□□□□□ -1.87
DDX47Q9H0S4 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.38□□□□□ -1.87
DDX47Q9H0S4 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.38□□□□□ -1.87
DDX47Q9H0S4 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.38□□□□□ -1.87
DDX47Q9H0S4 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.38□□□□□ -1.87
DDX47Q9H0S4 FAM60BP-201ENST00000578364 658 ntBASIC3.38□□□□□ -1.87
DDX47Q9H0S4 AC015688.2-201ENST00000584523 262 ntBASIC3.38□□□□□ -1.87
DDX47Q9H0S4 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.38□□□□□ -1.87
DDX47Q9H0S4 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.38□□□□□ -1.87
DDX47Q9H0S4 BDH2P1-201ENST00000602288 736 ntBASIC3.38□□□□□ -1.87
DDX47Q9H0S4 VIS1.1-201ENST00000610517 203 ntBASIC3.38□□□□□ -1.87
DDX47Q9H0S4 AL591516.1-201ENST00000611326 274 ntBASIC3.38□□□□□ -1.87
DDX47Q9H0S4 AL390240.1-201ENST00000612950 384 ntBASIC3.38□□□□□ -1.87
DDX47Q9H0S4 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.38□□□□□ -1.87
DDX47Q9H0S4 AL356585.4-201ENST00000623078 1229 ntBASIC3.38□□□□□ -1.87
DDX47Q9H0S4 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
DDX47Q9H0S4 AC002546.1-201ENST00000588041 2504 ntBASIC3.38□□□□□ -1.87
DDX47Q9H0S4 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
DDX47Q9H0S4 AC093831.2-201ENST00000624393 3427 ntBASIC3.38□□□□□ -1.87
DDX47Q9H0S4 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.37□□□□□ -1.87
DDX47Q9H0S4 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
DDX47Q9H0S4 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
DDX47Q9H0S4 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
DDX47Q9H0S4 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
DDX47Q9H0S4 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.37□□□□□ -1.87
DDX47Q9H0S4 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.37□□□□□ -1.87
DDX47Q9H0S4 NDUFB4P5-201ENST00000415445 361 ntBASIC3.37□□□□□ -1.87
DDX47Q9H0S4 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.37□□□□□ -1.87
DDX47Q9H0S4 AC019178.2-201ENST00000423595 505 ntBASIC3.37□□□□□ -1.87
DDX47Q9H0S4 MTCO1P39-201ENST00000426148 480 ntBASIC3.37□□□□□ -1.87
DDX47Q9H0S4 AL445584.1-201ENST00000431451 330 ntBASIC3.37□□□□□ -1.87
DDX47Q9H0S4 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.37□□□□□ -1.87
DDX47Q9H0S4 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.37□□□□□ -1.87
DDX47Q9H0S4 RPL23AP76-201ENST00000441860 458 ntBASIC3.37□□□□□ -1.87
DDX47Q9H0S4 AL133547.1-201ENST00000448546 220 ntBASIC3.37□□□□□ -1.87
DDX47Q9H0S4 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.37□□□□□ -1.87
DDX47Q9H0S4 SUMO2P2-201ENST00000456482 255 ntBASIC3.37□□□□□ -1.87
DDX47Q9H0S4 snoU109.3-201ENST00000459477 145 ntBASIC3.37□□□□□ -1.87
DDX47Q9H0S4 AC011979.1-201ENST00000472300 483 ntBASIC3.37□□□□□ -1.87
DDX47Q9H0S4 RN7SL283P-201ENST00000489055 303 ntBASIC3.37□□□□□ -1.87
DDX47Q9H0S4 COX7A2P2-201ENST00000505291 250 ntBASIC3.37□□□□□ -1.87
DDX47Q9H0S4 AC010374.2-201ENST00000512933 535 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms