Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 RNU2-1-201ENST00000618664 191 ntBASIC3.36□□□□□ -1.87
KRTAP3-1Q9BYR8 U2.6-201ENST00000619225 191 ntBASIC3.36□□□□□ -1.87
KRTAP3-1Q9BYR8 U2.5-201ENST00000619465 191 ntBASIC3.36□□□□□ -1.87
KRTAP3-1Q9BYR8 U2.10-201ENST00000620268 191 ntBASIC3.36□□□□□ -1.87
KRTAP3-1Q9BYR8 AL353748.2-201ENST00000622148 471 ntBASIC3.36□□□□□ -1.87
KRTAP3-1Q9BYR8 AC027309.3-201ENST00000623419 351 ntBASIC3.36□□□□□ -1.87
KRTAP3-1Q9BYR8 SCARNA4-202ENST00000625402 129 ntBASIC3.36□□□□□ -1.87
KRTAP3-1Q9BYR8 TMEM55A-206ENST00000630164 171 ntTSL 5 BASIC3.36□□□□□ -1.87
KRTAP3-1Q9BYR8 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC3.36□□□□□ -1.87
KRTAP3-1Q9BYR8 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC3.36□□□□□ -1.87
KRTAP3-1Q9BYR8 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
KRTAP3-1Q9BYR8 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
KRTAP3-1Q9BYR8 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
KRTAP3-1Q9BYR8 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
KRTAP3-1Q9BYR8 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
KRTAP3-1Q9BYR8 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
KRTAP3-1Q9BYR8 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
KRTAP3-1Q9BYR8 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.36□□□□□ -1.87
KRTAP3-1Q9BYR8 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
KRTAP3-1Q9BYR8 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
KRTAP3-1Q9BYR8 RBMY1HP-201ENST00000382759 1389 ntBASIC3.36□□□□□ -1.87
KRTAP3-1Q9BYR8 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
KRTAP3-1Q9BYR8 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
KRTAP3-1Q9BYR8 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
KRTAP3-1Q9BYR8 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 SNX18P3-202ENST00000565670 1750 ntBASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 AL109809.4-201ENST00000603520 2185 ntBASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 RNA5SP197-201ENST00000363357 119 ntBASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 U3.7-201ENST00000363668 216 ntBASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 Y_RNA.245-201ENST00000364493 95 ntBASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 RNA5SP442-201ENST00000365050 107 ntBASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 MIR514A1-201ENST00000385133 98 ntBASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 RNU2-52P-201ENST00000410680 190 ntBASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 RNU6-1001P-201ENST00000411265 100 ntBASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 SNX18P13-201ENST00000412442 529 ntBASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 RPL30P13-201ENST00000418873 348 ntBASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 MRPS21P2-201ENST00000424704 264 ntBASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 COX6B1P7-201ENST00000430845 235 ntBASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 MYL6P3-201ENST00000436904 432 ntBASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 AL078601.1-201ENST00000444542 271 ntBASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 AL359073.1-201ENST00000448036 403 ntBASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 CDKN2AIPNLP1-201ENST00000460287 302 ntBASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 RPS20P22-201ENST00000473700 357 ntBASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 RNA5SP272-201ENST00000516095 111 ntBASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 RNU6-971P-201ENST00000516920 106 ntBASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 AP005639.1-201ENST00000526939 192 ntBASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 SSU72P6-201ENST00000532644 488 ntBASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 AL049869.4-201ENST00000555669 178 ntBASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 AC009021.1-201ENST00000566098 375 ntTSL 5 BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 AP003115.1-201ENST00000569849 463 ntBASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 MIR4262-201ENST00000578394 54 ntBASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 AC024255.1-201ENST00000614376 102 ntBASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 AC004241.2-201ENST00000614562 444 ntBASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 AC111152.1-202ENST00000635848 339 ntBASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 GOT2P1-201ENST00000440922 1309 ntBASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 AC009779.8-201ENST00000641684 4384 ntBASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 DOCK11P1-201ENST00000553480 5932 ntBASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
KRTAP3-1Q9BYR8 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms