Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.84□□□□□ -1.63
RTFDC1Q9BY42 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RTFDC1Q9BY42 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.64
RTFDC1Q9BY42 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 SNORD35B-201ENST00000363660 87 ntBASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 RNU6-263P-201ENST00000363811 107 ntBASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 RNU5E-5P-201ENST00000365379 116 ntBASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 RNU6-1207P-201ENST00000384343 107 ntBASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 RN7SKP56-201ENST00000410513 331 ntBASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 RNU4-78P-201ENST00000410940 126 ntBASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 AL513174.1-201ENST00000423182 629 ntBASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 AL591419.1-201ENST00000427423 339 ntBASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 NANOGP6-201ENST00000429190 847 ntBASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 HMGN2P31-201ENST00000432430 273 ntBASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 TAF9P1-201ENST00000445421 515 ntBASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 EPS15P1-201ENST00000448836 336 ntBASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 AC098824.1-201ENST00000453565 980 ntBASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 SSXP1-201ENST00000453640 473 ntBASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 FGF7P3-201ENST00000454645 303 ntBASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 TAF9P2-201ENST00000454958 515 ntBASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 AC021382.1-201ENST00000483523 359 ntBASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 PRELID3BP7-201ENST00000503606 469 ntBASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 FABP5P5-201ENST00000515537 406 ntBASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 IGHV3-32-201ENST00000519182 355 ntBASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 IGLV3-26-201ENST00000520756 302 ntBASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 AC087369.1-201ENST00000520775 996 ntBASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 AC007115.1-201ENST00000546853 234 ntBASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 BCRP9-201ENST00000605312 388 ntBASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 AL139089.1-201ENST00000620372 975 ntBASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.83□□□□□ -1.64
RTFDC1Q9BY42 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.82□□□□□ -1.64
RTFDC1Q9BY42 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RTFDC1Q9BY42 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
RTFDC1Q9BY42 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RTFDC1Q9BY42 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RTFDC1Q9BY42 FRG1BP-201ENST00000278882 761 ntBASIC4.82□□□□□ -1.64
RTFDC1Q9BY42 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RTFDC1Q9BY42 Y_RNA.553-201ENST00000384670 102 ntBASIC4.82□□□□□ -1.64
RTFDC1Q9BY42 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RTFDC1Q9BY42 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RTFDC1Q9BY42 PGBD4P8-201ENST00000412993 562 ntBASIC4.82□□□□□ -1.64
RTFDC1Q9BY42 AC016907.1-201ENST00000419483 435 ntBASIC4.82□□□□□ -1.64
RTFDC1Q9BY42 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.82□□□□□ -1.64
RTFDC1Q9BY42 AL137014.1-201ENST00000420490 1226 ntBASIC4.82□□□□□ -1.64
RTFDC1Q9BY42 AL592447.1-201ENST00000447592 540 ntBASIC4.82□□□□□ -1.64
RTFDC1Q9BY42 ST13P20-201ENST00000447996 1065 ntBASIC4.82□□□□□ -1.64
RTFDC1Q9BY42 AL353691.1-201ENST00000451332 387 ntBASIC4.82□□□□□ -1.64
RTFDC1Q9BY42 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.82□□□□□ -1.64
RTFDC1Q9BY42 HMGB1P36-201ENST00000487709 576 ntBASIC4.82□□□□□ -1.64
RTFDC1Q9BY42 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC4.82□□□□□ -1.64
RTFDC1Q9BY42 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.82□□□□□ -1.64
RTFDC1Q9BY42 MTND3P5-201ENST00000512798 333 ntBASIC4.82□□□□□ -1.64
RTFDC1Q9BY42 RPL12P22-201ENST00000519073 490 ntBASIC4.82□□□□□ -1.64
RTFDC1Q9BY42 AC060788.1-201ENST00000521318 469 ntBASIC4.82□□□□□ -1.64
RTFDC1Q9BY42 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC4.82□□□□□ -1.64
RTFDC1Q9BY42 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.82□□□□□ -1.64
RTFDC1Q9BY42 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.82□□□□□ -1.64
RTFDC1Q9BY42 AL031176.1-201ENST00000604554 466 ntBASIC4.82□□□□□ -1.64
RTFDC1Q9BY42 AL356585.4-201ENST00000623078 1229 ntBASIC4.82□□□□□ -1.64
RTFDC1Q9BY42 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.82□□□□□ -1.64
RTFDC1Q9BY42 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RTFDC1Q9BY42 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
RTFDC1Q9BY42 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
RTFDC1Q9BY42 AC073346.2-201ENST00000624724 2058 ntBASIC4.82□□□□□ -1.64
RTFDC1Q9BY42 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
RTFDC1Q9BY42 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RTFDC1Q9BY42 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.82□□□□□ -1.64
RTFDC1Q9BY42 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.82□□□□□ -1.64
RTFDC1Q9BY42 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.82□□□□□ -1.64
RTFDC1Q9BY42 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
RTFDC1Q9BY42 AP002001.2-201ENST00000529025 1469 ntBASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 AL049781.1-201ENST00000623195 3585 ntBASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 MTND4P26-201ENST00000415971 1359 ntBASIC4.81□□□□□ -1.64
RTFDC1Q9BY42 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms