Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CDX2Q99626 GABRG2-229ENST00000641017 3628 ntBASIC2.91□□□□□ -1.94
CDX2Q99626 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
CDX2Q99626 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CDX2Q99626 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.91□□□□□ -1.94
CDX2Q99626 MTND5P3-201ENST00000438536 1800 ntBASIC2.91□□□□□ -1.94
CDX2Q99626 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CDX2Q99626 MTND4P8-201ENST00000514997 1362 ntBASIC2.9□□□□□ -1.94
CDX2Q99626 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.9□□□□□ -1.95
CDX2Q99626 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.9□□□□□ -1.95
CDX2Q99626 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.9□□□□□ -1.95
CDX2Q99626 SNORD56.4-201ENST00000363883 71 ntBASIC2.9□□□□□ -1.95
CDX2Q99626 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.9□□□□□ -1.95
CDX2Q99626 Y_RNA.466-201ENST00000384294 113 ntBASIC2.9□□□□□ -1.95
CDX2Q99626 Y_RNA.508-201ENST00000384502 114 ntBASIC2.9□□□□□ -1.95
CDX2Q99626 MIR27B-201ENST00000385129 97 ntBASIC2.9□□□□□ -1.95
CDX2Q99626 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
CDX2Q99626 PRRC2CP1-201ENST00000404428 159 ntBASIC2.9□□□□□ -1.95
CDX2Q99626 RPL31P2-201ENST00000413849 377 ntBASIC2.9□□□□□ -1.95
CDX2Q99626 MTND4P15-201ENST00000437913 1033 ntBASIC2.9□□□□□ -1.95
CDX2Q99626 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.9□□□□□ -1.95
CDX2Q99626 GAPDHP39-201ENST00000481866 979 ntBASIC2.9□□□□□ -1.95
CDX2Q99626 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC2.9□□□□□ -1.95
CDX2Q99626 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.9□□□□□ -1.95
CDX2Q99626 AC010468.3-201ENST00000508225 458 ntBASIC2.9□□□□□ -1.95
CDX2Q99626 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC2.9□□□□□ -1.95
CDX2Q99626 RN7SKP60-201ENST00000516985 239 ntBASIC2.9□□□□□ -1.95
CDX2Q99626 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.9□□□□□ -1.95
CDX2Q99626 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.9□□□□□ -1.95
CDX2Q99626 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.9□□□□□ -1.95
CDX2Q99626 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.9□□□□□ -1.95
CDX2Q99626 AC074029.1-201ENST00000552531 1044 ntBASIC2.9□□□□□ -1.95
CDX2Q99626 AC007954.1-201ENST00000554198 494 ntBASIC2.9□□□□□ -1.95
CDX2Q99626 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.9□□□□□ -1.95
CDX2Q99626 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.9□□□□□ -1.95
CDX2Q99626 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.9□□□□□ -1.95
CDX2Q99626 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.9□□□□□ -1.95
CDX2Q99626 AP001004.1-201ENST00000582468 324 ntBASIC2.9□□□□□ -1.95
CDX2Q99626 AC022069.1-201ENST00000582910 658 ntBASIC2.9□□□□□ -1.95
CDX2Q99626 AC012254.4-201ENST00000588843 273 ntBASIC2.9□□□□□ -1.95
CDX2Q99626 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.9□□□□□ -1.95
CDX2Q99626 AL365400.2-201ENST00000605604 902 ntBASIC2.9□□□□□ -1.95
CDX2Q99626 AL591516.1-201ENST00000611326 274 ntBASIC2.9□□□□□ -1.95
CDX2Q99626 AL450489.1-201ENST00000612071 468 ntBASIC2.9□□□□□ -1.95
CDX2Q99626 AC008121.2-201ENST00000614647 523 ntBASIC2.9□□□□□ -1.95
CDX2Q99626 AC018926.3-201ENST00000618841 406 ntBASIC2.9□□□□□ -1.95
CDX2Q99626 AP003400.6-201ENST00000624698 740 ntBASIC2.9□□□□□ -1.95
CDX2Q99626 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC2.9□□□□□ -1.95
CDX2Q99626 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
CDX2Q99626 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
CDX2Q99626 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CDX2Q99626 AC008432.1-201ENST00000615912 1320 ntBASIC2.9□□□□□ -1.95
CDX2Q99626 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC2.89□□□□□ -1.95
CDX2Q99626 AC011978.2-201ENST00000569835 2054 ntBASIC2.89□□□□□ -1.95
CDX2Q99626 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
CDX2Q99626 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CDX2Q99626 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
CDX2Q99626 RNU6-253P-201ENST00000384730 105 ntBASIC2.89□□□□□ -1.95
CDX2Q99626 MIR607-201ENST00000385241 96 ntBASIC2.89□□□□□ -1.95
CDX2Q99626 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
CDX2Q99626 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2.89□□□□□ -1.95
CDX2Q99626 RNU4-27P-201ENST00000410889 139 ntBASIC2.89□□□□□ -1.95
CDX2Q99626 UBE2V1P11-201ENST00000411559 285 ntBASIC2.89□□□□□ -1.95
CDX2Q99626 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.89□□□□□ -1.95
CDX2Q99626 RPL7P10-201ENST00000417407 739 ntBASIC2.89□□□□□ -1.95
CDX2Q99626 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.89□□□□□ -1.95
CDX2Q99626 HMGB1P45-201ENST00000435986 653 ntBASIC2.89□□□□□ -1.95
CDX2Q99626 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.89□□□□□ -1.95
CDX2Q99626 AC008280.2-201ENST00000455473 307 ntBASIC2.89□□□□□ -1.95
CDX2Q99626 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.89□□□□□ -1.95
CDX2Q99626 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CDX2Q99626 RPL21P47-201ENST00000483696 477 ntBASIC2.89□□□□□ -1.95
CDX2Q99626 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.89□□□□□ -1.95
CDX2Q99626 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC2.89□□□□□ -1.95
CDX2Q99626 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC2.89□□□□□ -1.95
CDX2Q99626 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.89□□□□□ -1.95
CDX2Q99626 IL7R-208ENST00000511982 612 ntTSL 2 BASIC2.89□□□□□ -1.95
CDX2Q99626 AC010265.1-201ENST00000513509 211 ntBASIC2.89□□□□□ -1.95
CDX2Q99626 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC2.89□□□□□ -1.95
CDX2Q99626 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.89□□□□□ -1.95
CDX2Q99626 FAM60DP-201ENST00000524174 632 ntBASIC2.89□□□□□ -1.95
CDX2Q99626 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.89□□□□□ -1.95
CDX2Q99626 SYF2P1-201ENST00000550658 413 ntBASIC2.89□□□□□ -1.95
CDX2Q99626 TGIF1P1-201ENST00000558095 802 ntBASIC2.89□□□□□ -1.95
CDX2Q99626 AC007621.1-201ENST00000604544 437 ntBASIC2.89□□□□□ -1.95
CDX2Q99626 AC007938.3-201ENST00000604965 623 ntBASIC2.89□□□□□ -1.95
CDX2Q99626 AC006213.5-201ENST00000619673 288 ntBASIC2.89□□□□□ -1.95
CDX2Q99626 AC097460.3-201ENST00000623099 442 ntBASIC2.89□□□□□ -1.95
CDX2Q99626 AC073592.7-201ENST00000623659 507 ntBASIC2.89□□□□□ -1.95
CDX2Q99626 AC092608.3-201ENST00000625017 386 ntBASIC2.89□□□□□ -1.95
CDX2Q99626 AC097372.4-201ENST00000625025 466 ntBASIC2.89□□□□□ -1.95
CDX2Q99626 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
CDX2Q99626 XPOTP1-201ENST00000443317 2398 ntBASIC2.89□□□□□ -1.95
CDX2Q99626 SEC63P2-201ENST00000503863 1939 ntBASIC2.89□□□□□ -1.95
CDX2Q99626 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CDX2Q99626 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CDX2Q99626 NSRP1P1-201ENST00000444067 1693 ntBASIC2.88□□□□□ -1.95
CDX2Q99626 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
CDX2Q99626 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
CDX2Q99626 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms