Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 OR5G4P-201ENST00000525251 760 ntBASIC4.23□□□□□ -1.73
VPS50Q96JG6 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS50Q96JG6 EEF1B2P4-201ENST00000551398 348 ntBASIC4.23□□□□□ -1.73
VPS50Q96JG6 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.23□□□□□ -1.73
VPS50Q96JG6 AC105129.1-201ENST00000560250 297 ntBASIC4.23□□□□□ -1.73
VPS50Q96JG6 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.23□□□□□ -1.73
VPS50Q96JG6 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC4.23□□□□□ -1.73
VPS50Q96JG6 AL353997.4-201ENST00000586196 166 ntBASIC4.23□□□□□ -1.73
VPS50Q96JG6 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.23□□□□□ -1.73
VPS50Q96JG6 IPO5P1-202ENST00000600039 287 ntBASIC4.23□□□□□ -1.73
VPS50Q96JG6 AL161729.4-201ENST00000604650 476 ntBASIC4.23□□□□□ -1.73
VPS50Q96JG6 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.23□□□□□ -1.73
VPS50Q96JG6 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.23□□□□□ -1.73
VPS50Q96JG6 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.23□□□□□ -1.73
VPS50Q96JG6 MIR6830-201ENST00000636015 70 ntBASIC4.23□□□□□ -1.73
VPS50Q96JG6 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.23□□□□□ -1.73
VPS50Q96JG6 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.23□□□□□ -1.73
VPS50Q96JG6 AC097714.1-201ENST00000511272 1647 ntBASIC4.23□□□□□ -1.73
VPS50Q96JG6 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VPS50Q96JG6 NUP58P1-201ENST00000502546 1738 ntBASIC4.23□□□□□ -1.73
VPS50Q96JG6 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.23□□□□□ -1.73
VPS50Q96JG6 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
VPS50Q96JG6 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VPS50Q96JG6 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.22□□□□□ -1.73
VPS50Q96JG6 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
VPS50Q96JG6 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
VPS50Q96JG6 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
VPS50Q96JG6 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.22□□□□□ -1.73
VPS50Q96JG6 OTUD4P1-201ENST00000237841 3067 ntBASIC4.22□□□□□ -1.73
VPS50Q96JG6 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.22□□□□□ -1.73
VPS50Q96JG6 Y_RNA.46-201ENST00000362695 102 ntBASIC4.22□□□□□ -1.73
VPS50Q96JG6 RNY4P24-201ENST00000362735 96 ntBASIC4.22□□□□□ -1.73
VPS50Q96JG6 RNU6-878P-201ENST00000384578 110 ntBASIC4.22□□□□□ -1.73
VPS50Q96JG6 MTND4LP20-201ENST00000402379 270 ntBASIC4.22□□□□□ -1.73
VPS50Q96JG6 MIR548F1-201ENST00000408667 84 ntBASIC4.22□□□□□ -1.73
VPS50Q96JG6 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.22□□□□□ -1.73
VPS50Q96JG6 RNU4-25P-201ENST00000410569 230 ntBASIC4.22□□□□□ -1.73
VPS50Q96JG6 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS50Q96JG6 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS50Q96JG6 RPS23P10-201ENST00000416185 486 ntBASIC4.22□□□□□ -1.73
VPS50Q96JG6 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS50Q96JG6 RPL7AP25-201ENST00000423357 805 ntBASIC4.22□□□□□ -1.73
VPS50Q96JG6 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS50Q96JG6 USP9YP7-201ENST00000436723 430 ntBASIC4.22□□□□□ -1.73
VPS50Q96JG6 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS50Q96JG6 SKP1P1-201ENST00000438081 489 ntBASIC4.22□□□□□ -1.73
VPS50Q96JG6 SDCBPP1-201ENST00000440192 890 ntBASIC4.22□□□□□ -1.73
VPS50Q96JG6 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS50Q96JG6 RPL21P133-201ENST00000443666 476 ntBASIC4.22□□□□□ -1.73
VPS50Q96JG6 PHBP16-201ENST00000446318 950 ntBASIC4.22□□□□□ -1.73
VPS50Q96JG6 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.22□□□□□ -1.73
VPS50Q96JG6 AC093392.2-201ENST00000450682 337 ntBASIC4.22□□□□□ -1.73
VPS50Q96JG6 HMGB3P22-202ENST00000451823 572 ntBASIC4.22□□□□□ -1.73
VPS50Q96JG6 AC012671.1-201ENST00000451912 203 ntBASIC4.22□□□□□ -1.73
VPS50Q96JG6 USP9YP32-201ENST00000452432 430 ntBASIC4.22□□□□□ -1.73
VPS50Q96JG6 AC009963.2-201ENST00000453431 138 ntBASIC4.22□□□□□ -1.73
VPS50Q96JG6 RPL21P126-201ENST00000470049 478 ntBASIC4.22□□□□□ -1.73
VPS50Q96JG6 AC109327.1-201ENST00000471666 403 ntBASIC4.22□□□□□ -1.73
VPS50Q96JG6 AC104563.1-201ENST00000476147 376 ntBASIC4.22□□□□□ -1.73
VPS50Q96JG6 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS50Q96JG6 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS50Q96JG6 IGLVIV-65-201ENST00000517313 360 ntBASIC4.22□□□□□ -1.73
VPS50Q96JG6 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS50Q96JG6 AP003181.2-201ENST00000528941 181 ntBASIC4.22□□□□□ -1.73
VPS50Q96JG6 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS50Q96JG6 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS50Q96JG6 AL157394.1-201ENST00000562983 1224 ntBASIC4.22□□□□□ -1.73
VPS50Q96JG6 AC053481.3-201ENST00000577881 843 ntBASIC4.22□□□□□ -1.73
VPS50Q96JG6 MIR4644-201ENST00000579929 84 ntBASIC4.22□□□□□ -1.73
VPS50Q96JG6 AC126118.1-201ENST00000607744 628 ntBASIC4.22□□□□□ -1.73
VPS50Q96JG6 AF250324.2-201ENST00000608299 610 ntBASIC4.22□□□□□ -1.73
VPS50Q96JG6 AC068944.2-201ENST00000610373 403 ntBASIC4.22□□□□□ -1.73
VPS50Q96JG6 MLECP1-201ENST00000615893 709 ntBASIC4.22□□□□□ -1.73
VPS50Q96JG6 AC108479.2-201ENST00000617314 601 ntBASIC4.22□□□□□ -1.73
VPS50Q96JG6 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.22□□□□□ -1.73
VPS50Q96JG6 MIR6758-201ENST00000620653 63 ntBASIC4.22□□□□□ -1.73
VPS50Q96JG6 AC006065.5-201ENST00000623427 349 ntBASIC4.22□□□□□ -1.73
VPS50Q96JG6 OR5AK4P-201ENST00000635912 903 ntBASIC4.22□□□□□ -1.73
VPS50Q96JG6 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.22□□□□□ -1.73
VPS50Q96JG6 AC139769.1-204ENST00000472297 1931 ntBASIC4.22□□□□□ -1.73
VPS50Q96JG6 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
VPS50Q96JG6 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VPS50Q96JG6 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VPS50Q96JG6 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.22□□□□□ -1.73
VPS50Q96JG6 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.22□□□□□ -1.73
VPS50Q96JG6 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
VPS50Q96JG6 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
VPS50Q96JG6 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
VPS50Q96JG6 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
VPS50Q96JG6 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
VPS50Q96JG6 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
VPS50Q96JG6 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.21□□□□□ -1.74
VPS50Q96JG6 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
VPS50Q96JG6 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
VPS50Q96JG6 OR5P1P-201ENST00000299512 925 ntBASIC4.21□□□□□ -1.74
VPS50Q96JG6 RNA5SP322-201ENST00000363617 119 ntBASIC4.21□□□□□ -1.74
VPS50Q96JG6 RNVU1-3-201ENST00000364313 161 ntBASIC4.21□□□□□ -1.74
VPS50Q96JG6 RNY4P34-201ENST00000364779 95 ntBASIC4.21□□□□□ -1.74
VPS50Q96JG6 AC078974.1-201ENST00000411597 223 ntBASIC4.21□□□□□ -1.74
VPS50Q96JG6 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 193.6 ms