Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PHC3Q8NDX5 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.27□□□□□ -1.57
PHC3Q8NDX5 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PHC3Q8NDX5 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
PHC3Q8NDX5 DDX10P1-201ENST00000448545 1933 ntBASIC5.27□□□□□ -1.57
PHC3Q8NDX5 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PHC3Q8NDX5 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.27□□□□□ -1.57
PHC3Q8NDX5 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PHC3Q8NDX5 AC011155.1-201ENST00000316512 456 ntBASIC5.27□□□□□ -1.57
PHC3Q8NDX5 RNU1-19P-201ENST00000363306 165 ntBASIC5.27□□□□□ -1.57
PHC3Q8NDX5 RNU6-188P-201ENST00000364207 107 ntBASIC5.27□□□□□ -1.57
PHC3Q8NDX5 U3.12-201ENST00000364498 214 ntBASIC5.27□□□□□ -1.57
PHC3Q8NDX5 Y_RNA.259-201ENST00000364619 101 ntBASIC5.27□□□□□ -1.57
PHC3Q8NDX5 RN7SKP153-201ENST00000365026 316 ntBASIC5.27□□□□□ -1.57
PHC3Q8NDX5 SNORD115-7-201ENST00000365306 82 ntBASIC5.27□□□□□ -1.57
PHC3Q8NDX5 SNORA24.1-201ENST00000384401 135 ntBASIC5.27□□□□□ -1.57
PHC3Q8NDX5 RNU6-1297P-201ENST00000384415 104 ntBASIC5.27□□□□□ -1.57
PHC3Q8NDX5 AL359634.1-202ENST00000404721 284 ntBASIC5.27□□□□□ -1.57
PHC3Q8NDX5 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.27□□□□□ -1.57
PHC3Q8NDX5 RNU4-46P-201ENST00000410818 138 ntBASIC5.27□□□□□ -1.57
PHC3Q8NDX5 AC018630.2-202ENST00000422992 927 ntBASIC5.27□□□□□ -1.57
PHC3Q8NDX5 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.27□□□□□ -1.57
PHC3Q8NDX5 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.27□□□□□ -1.57
PHC3Q8NDX5 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.27□□□□□ -1.57
PHC3Q8NDX5 AC090804.1-201ENST00000448870 490 ntBASIC5.27□□□□□ -1.57
PHC3Q8NDX5 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC5.27□□□□□ -1.57
PHC3Q8NDX5 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC5.27□□□□□ -1.57
PHC3Q8NDX5 RPS26P39-201ENST00000469206 341 ntBASIC5.27□□□□□ -1.57
PHC3Q8NDX5 RN7SL432P-201ENST00000484057 298 ntBASIC5.27□□□□□ -1.57
PHC3Q8NDX5 Y_RNA.654-201ENST00000497848 106 ntBASIC5.27□□□□□ -1.57
PHC3Q8NDX5 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC5.27□□□□□ -1.57
PHC3Q8NDX5 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5.27□□□□□ -1.57
PHC3Q8NDX5 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.27□□□□□ -1.57
PHC3Q8NDX5 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PHC3Q8NDX5 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.27□□□□□ -1.57
PHC3Q8NDX5 AC126177.5-201ENST00000549599 178 ntBASIC5.27□□□□□ -1.57
PHC3Q8NDX5 AC007225.2-201ENST00000562529 256 ntBASIC5.27□□□□□ -1.57
PHC3Q8NDX5 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PHC3Q8NDX5 AC024619.4-201ENST00000580924 316 ntBASIC5.27□□□□□ -1.57
PHC3Q8NDX5 AL670379.6-201ENST00000603753 252 ntBASIC5.27□□□□□ -1.57
PHC3Q8NDX5 AL670379.11-201ENST00000604059 253 ntBASIC5.27□□□□□ -1.57
PHC3Q8NDX5 AC008162.1-201ENST00000604718 254 ntBASIC5.27□□□□□ -1.57
PHC3Q8NDX5 AL670379.1-201ENST00000604752 252 ntBASIC5.27□□□□□ -1.57
PHC3Q8NDX5 AL670379.5-201ENST00000605253 252 ntBASIC5.27□□□□□ -1.57
PHC3Q8NDX5 AL670379.12-201ENST00000605291 253 ntBASIC5.27□□□□□ -1.57
PHC3Q8NDX5 AL670379.8-201ENST00000605353 252 ntBASIC5.27□□□□□ -1.57
PHC3Q8NDX5 AL162730.1-201ENST00000605734 292 ntBASIC5.27□□□□□ -1.57
PHC3Q8NDX5 AL670379.7-201ENST00000605823 252 ntBASIC5.27□□□□□ -1.57
PHC3Q8NDX5 AC092807.2-201ENST00000609367 243 ntBASIC5.27□□□□□ -1.57
PHC3Q8NDX5 SNHG22-203ENST00000617833 660 ntBASIC5.27□□□□□ -1.57
PHC3Q8NDX5 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.27□□□□□ -1.57
PHC3Q8NDX5 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.27□□□□□ -1.57
PHC3Q8NDX5 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.27□□□□□ -1.57
PHC3Q8NDX5 AC018529.3-201ENST00000624212 2254 ntBASIC5.27□□□□□ -1.57
PHC3Q8NDX5 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
PHC3Q8NDX5 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC5.27□□□□□ -1.57
PHC3Q8NDX5 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PHC3Q8NDX5 AC116667.1-201ENST00000604855 2072 ntBASIC5.27□□□□□ -1.57
PHC3Q8NDX5 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PHC3Q8NDX5 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.27□□□□□ -1.57
PHC3Q8NDX5 AL731566.1-201ENST00000620490 1937 ntBASIC5.27□□□□□ -1.57
PHC3Q8NDX5 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
PHC3Q8NDX5 API5P2-201ENST00000397055 1498 ntBASIC5.26□□□□□ -1.57
PHC3Q8NDX5 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
PHC3Q8NDX5 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
PHC3Q8NDX5 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.26□□□□□ -1.57
PHC3Q8NDX5 RNU6-61P-201ENST00000365528 109 ntBASIC5.26□□□□□ -1.57
PHC3Q8NDX5 PPIAP9-201ENST00000403866 498 ntBASIC5.26□□□□□ -1.57
PHC3Q8NDX5 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.26□□□□□ -1.57
PHC3Q8NDX5 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.26□□□□□ -1.57
PHC3Q8NDX5 AL137014.1-201ENST00000420490 1226 ntBASIC5.26□□□□□ -1.57
PHC3Q8NDX5 CALM2P2-201ENST00000428512 440 ntBASIC5.26□□□□□ -1.57
PHC3Q8NDX5 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.26□□□□□ -1.57
PHC3Q8NDX5 BRK1P2-201ENST00000442875 223 ntBASIC5.26□□□□□ -1.57
PHC3Q8NDX5 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC5.26□□□□□ -1.57
PHC3Q8NDX5 NIPA2P5-201ENST00000452282 464 ntBASIC5.26□□□□□ -1.57
PHC3Q8NDX5 AC007967.1-201ENST00000455422 1159 ntBASIC5.26□□□□□ -1.57
PHC3Q8NDX5 AC011225.1-201ENST00000457751 369 ntBASIC5.26□□□□□ -1.57
PHC3Q8NDX5 Y_RNA.635-201ENST00000459041 101 ntBASIC5.26□□□□□ -1.57
PHC3Q8NDX5 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC5.26□□□□□ -1.57
PHC3Q8NDX5 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC5.26□□□□□ -1.57
PHC3Q8NDX5 PGAM1P13-201ENST00000507497 754 ntBASIC5.26□□□□□ -1.57
PHC3Q8NDX5 AC104806.1-201ENST00000508720 308 ntBASIC5.26□□□□□ -1.57
PHC3Q8NDX5 RNU6-559P-201ENST00000516151 98 ntBASIC5.26□□□□□ -1.57
PHC3Q8NDX5 RNU6-864P-201ENST00000516256 108 ntBASIC5.26□□□□□ -1.57
PHC3Q8NDX5 SCARNA20.4-201ENST00000516969 131 ntBASIC5.26□□□□□ -1.57
PHC3Q8NDX5 SNORA25.17-201ENST00000517184 124 ntBASIC5.26□□□□□ -1.57
PHC3Q8NDX5 HMGB1P40-201ENST00000525121 540 ntBASIC5.26□□□□□ -1.57
PHC3Q8NDX5 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.26□□□□□ -1.57
PHC3Q8NDX5 AL049779.2-201ENST00000553847 315 ntBASIC5.26□□□□□ -1.57
PHC3Q8NDX5 AC093249.1-201ENST00000567049 203 ntBASIC5.26□□□□□ -1.57
PHC3Q8NDX5 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC5.26□□□□□ -1.57
PHC3Q8NDX5 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.26□□□□□ -1.57
PHC3Q8NDX5 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.26□□□□□ -1.57
PHC3Q8NDX5 AP001330.4-201ENST00000604350 154 ntBASIC5.26□□□□□ -1.57
PHC3Q8NDX5 AP001521.2-201ENST00000608772 546 ntBASIC5.26□□□□□ -1.57
PHC3Q8NDX5 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC5.26□□□□□ -1.57
PHC3Q8NDX5 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PHC3Q8NDX5 U73479.1-201ENST00000618062 168 ntBASIC5.26□□□□□ -1.57
PHC3Q8NDX5 AL133216.2-202ENST00000634512 349 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms