Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AC092638.1-201ENST00000411966 1275 ntBASIC3.21□□□□□ -1.9
CASP4P49662 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.21□□□□□ -1.9
CASP4P49662 UBE2V1P6-201ENST00000430840 422 ntBASIC3.21□□□□□ -1.9
CASP4P49662 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CASP4P49662 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.21□□□□□ -1.9
CASP4P49662 AL162389.1-201ENST00000449233 177 ntBASIC3.21□□□□□ -1.9
CASP4P49662 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.21□□□□□ -1.9
CASP4P49662 AC091179.1-201ENST00000461606 579 ntBASIC3.21□□□□□ -1.9
CASP4P49662 RPL21P8-201ENST00000465083 535 ntBASIC3.21□□□□□ -1.9
CASP4P49662 RPS29P2-201ENST00000479278 136 ntBASIC3.21□□□□□ -1.9
CASP4P49662 AC068724.1-201ENST00000487100 792 ntBASIC3.21□□□□□ -1.9
CASP4P49662 AC092185.1-201ENST00000491371 97 ntBASIC3.21□□□□□ -1.9
CASP4P49662 BOLA3P3-201ENST00000505182 232 ntBASIC3.21□□□□□ -1.9
CASP4P49662 MTCYBP37-201ENST00000510642 1133 ntBASIC3.21□□□□□ -1.9
CASP4P49662 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.21□□□□□ -1.9
CASP4P49662 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.21□□□□□ -1.9
CASP4P49662 AC087894.1-201ENST00000538359 518 ntBASIC3.21□□□□□ -1.9
CASP4P49662 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.21□□□□□ -1.9
CASP4P49662 MTCYBP27-201ENST00000555160 670 ntBASIC3.21□□□□□ -1.9
CASP4P49662 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.21□□□□□ -1.9
CASP4P49662 SNORD84-203ENST00000584275 78 ntBASIC3.21□□□□□ -1.9
CASP4P49662 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.21□□□□□ -1.9
CASP4P49662 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.21□□□□□ -1.9
CASP4P49662 AP003973.1-201ENST00000604639 691 ntBASIC3.21□□□□□ -1.9
CASP4P49662 AP000238.1-201ENST00000608759 426 ntBASIC3.21□□□□□ -1.9
CASP4P49662 AC006329.2-201ENST00000611491 394 ntBASIC3.21□□□□□ -1.9
CASP4P49662 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CASP4P49662 AL162274.2-201ENST00000614406 332 ntBASIC3.21□□□□□ -1.9
CASP4P49662 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.21□□□□□ -1.9
CASP4P49662 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
CASP4P49662 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CASP4P49662 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CASP4P49662 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CASP4P49662 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CASP4P49662 AP003122.5-201ENST00000527668 3766 ntBASIC3.21□□□□□ -1.9
CASP4P49662 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.21□□□□□ -1.9
CASP4P49662 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
CASP4P49662 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.2□□□□□ -1.9
CASP4P49662 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CASP4P49662 HMGB1P5-201ENST00000255320 642 ntBASIC3.2□□□□□ -1.9
CASP4P49662 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CASP4P49662 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CASP4P49662 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.2□□□□□ -1.9
CASP4P49662 MIR128-1-201ENST00000384921 82 ntBASIC3.2□□□□□ -1.9
CASP4P49662 SNORA48.2-201ENST00000390926 124 ntBASIC3.2□□□□□ -1.9
CASP4P49662 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.2□□□□□ -1.9
CASP4P49662 RPL7P27-201ENST00000403775 720 ntBASIC3.2□□□□□ -1.9
CASP4P49662 AL024474.1-201ENST00000404655 591 ntBASIC3.2□□□□□ -1.9
CASP4P49662 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.2□□□□□ -1.9
CASP4P49662 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.2□□□□□ -1.9
CASP4P49662 HSPE1P28-201ENST00000443139 211 ntBASIC3.2□□□□□ -1.9
CASP4P49662 RPS3AP12-201ENST00000443616 753 ntBASIC3.2□□□□□ -1.9
CASP4P49662 SSXP4-201ENST00000451349 245 ntBASIC3.2□□□□□ -1.9
CASP4P49662 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.2□□□□□ -1.9
CASP4P49662 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.2□□□□□ -1.9
CASP4P49662 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.2□□□□□ -1.9
CASP4P49662 HMGB1P15-201ENST00000453854 435 ntBASIC3.2□□□□□ -1.9
CASP4P49662 RPS20P24-201ENST00000457473 361 ntBASIC3.2□□□□□ -1.9
CASP4P49662 snoU13.4-201ENST00000458916 104 ntBASIC3.2□□□□□ -1.9
CASP4P49662 PABPC1P3-201ENST00000469174 459 ntBASIC3.2□□□□□ -1.9
CASP4P49662 RPS29P26-201ENST00000477483 171 ntBASIC3.2□□□□□ -1.9
CASP4P49662 AP004217.1-201ENST00000480579 346 ntBASIC3.2□□□□□ -1.9
CASP4P49662 RPL7P23-201ENST00000493874 747 ntBASIC3.2□□□□□ -1.9
CASP4P49662 AC118282.1-201ENST00000506408 765 ntBASIC3.2□□□□□ -1.9
CASP4P49662 RNA5SP468-201ENST00000516782 93 ntBASIC3.2□□□□□ -1.9
CASP4P49662 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.2□□□□□ -1.9
CASP4P49662 AC019227.1-201ENST00000526902 510 ntBASIC3.2□□□□□ -1.9
CASP4P49662 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.2□□□□□ -1.9
CASP4P49662 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.2□□□□□ -1.9
CASP4P49662 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.2□□□□□ -1.9
CASP4P49662 OR4H12P-201ENST00000556269 907 ntBASIC3.2□□□□□ -1.9
CASP4P49662 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.2□□□□□ -1.9
CASP4P49662 ZNF971P-201ENST00000562068 1249 ntBASIC3.2□□□□□ -1.9
CASP4P49662 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.2□□□□□ -1.9
CASP4P49662 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.2□□□□□ -1.9
CASP4P49662 AC005951.1-201ENST00000576706 485 ntBASIC3.2□□□□□ -1.9
CASP4P49662 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.2□□□□□ -1.9
CASP4P49662 VIS1.1-201ENST00000610517 203 ntBASIC3.2□□□□□ -1.9
CASP4P49662 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.2□□□□□ -1.9
CASP4P49662 AC109454.4-201ENST00000623411 649 ntBASIC3.2□□□□□ -1.9
CASP4P49662 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.2□□□□□ -1.9
CASP4P49662 AC026634.1-201ENST00000634369 198 ntBASIC3.2□□□□□ -1.9
CASP4P49662 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.2□□□□□ -1.9
CASP4P49662 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.2□□□□□ -1.9
CASP4P49662 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.2□□□□□ -1.9
CASP4P49662 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CASP4P49662 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CASP4P49662 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.2□□□□□ -1.9
CASP4P49662 AC244517.1-201ENST00000606030 2086 ntBASIC3.2□□□□□ -1.9
CASP4P49662 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.19□□□□□ -1.9
CASP4P49662 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.19□□□□□ -1.9
CASP4P49662 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CASP4P49662 RNU5B-4P-201ENST00000363508 111 ntBASIC3.19□□□□□ -1.9
CASP4P49662 SNORD82-201ENST00000365530 70 ntBASIC3.19□□□□□ -1.9
CASP4P49662 SNORA48.5-201ENST00000391143 135 ntBASIC3.19□□□□□ -1.9
CASP4P49662 AL138885.1-201ENST00000405921 675 ntBASIC3.19□□□□□ -1.9
CASP4P49662 AL133264.1-201ENST00000407157 562 ntBASIC3.19□□□□□ -1.9
CASP4P49662 RPL35AP12-201ENST00000425362 338 ntBASIC3.19□□□□□ -1.9
CASP4P49662 MTCYBP32-201ENST00000427945 1084 ntBASIC3.19□□□□□ -1.9
CASP4P49662 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms