Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 GNG5P5-201ENST00000420444 220 ntBASIC4.53□□□□□ -1.68
COL11A2P13942 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.53□□□□□ -1.68
COL11A2P13942 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.53□□□□□ -1.68
COL11A2P13942 AC093019.1-201ENST00000443135 252 ntBASIC4.53□□□□□ -1.68
COL11A2P13942 CALM1P2-201ENST00000452941 448 ntBASIC4.53□□□□□ -1.68
COL11A2P13942 RBMY2UP-201ENST00000453474 324 ntBASIC4.53□□□□□ -1.68
COL11A2P13942 ARPC3P2-201ENST00000457786 533 ntBASIC4.53□□□□□ -1.68
COL11A2P13942 SNORD105B-201ENST00000458770 79 ntBASIC4.53□□□□□ -1.68
COL11A2P13942 IGHV3-63-201ENST00000518422 341 ntBASIC4.53□□□□□ -1.68
COL11A2P13942 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.53□□□□□ -1.68
COL11A2P13942 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.53□□□□□ -1.68
COL11A2P13942 MIR7154-201ENST00000620673 73 ntBASIC4.53□□□□□ -1.68
COL11A2P13942 AC009033.1-201ENST00000624279 431 ntBASIC4.53□□□□□ -1.68
COL11A2P13942 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COL11A2P13942 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL11A2P13942 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL11A2P13942 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL11A2P13942 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL11A2P13942 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COL11A2P13942 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL11A2P13942 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL11A2P13942 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL11A2P13942 RNU6-98P-201ENST00000384173 107 ntBASIC4.52□□□□□ -1.69
COL11A2P13942 RNU6-244P-201ENST00000391028 104 ntBASIC4.52□□□□□ -1.69
COL11A2P13942 RNU6-1300P-201ENST00000391046 108 ntBASIC4.52□□□□□ -1.69
COL11A2P13942 RNU6-876P-201ENST00000391295 104 ntBASIC4.52□□□□□ -1.69
COL11A2P13942 FCF1P2-201ENST00000415284 583 ntBASIC4.52□□□□□ -1.69
COL11A2P13942 AC008850.1-201ENST00000427546 362 ntBASIC4.52□□□□□ -1.69
COL11A2P13942 ZYG11AP1-201ENST00000430329 837 ntBASIC4.52□□□□□ -1.69
COL11A2P13942 AC011742.1-201ENST00000431448 434 ntBASIC4.52□□□□□ -1.69
COL11A2P13942 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.52□□□□□ -1.69
COL11A2P13942 AL831737.1-201ENST00000441288 271 ntBASIC4.52□□□□□ -1.69
COL11A2P13942 DPPA3P1-201ENST00000448050 469 ntBASIC4.52□□□□□ -1.69
COL11A2P13942 RPL39P6-201ENST00000448289 150 ntBASIC4.52□□□□□ -1.69
COL11A2P13942 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.52□□□□□ -1.69
COL11A2P13942 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.52□□□□□ -1.69
COL11A2P13942 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.52□□□□□ -1.69
COL11A2P13942 HMGN1P10-201ENST00000474557 553 ntBASIC4.52□□□□□ -1.69
COL11A2P13942 RBM43P1-201ENST00000476891 1081 ntBASIC4.52□□□□□ -1.69
COL11A2P13942 AC117522.3-201ENST00000507974 584 ntBASIC4.52□□□□□ -1.69
COL11A2P13942 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.52□□□□□ -1.69
COL11A2P13942 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
COL11A2P13942 AC021146.3-201ENST00000511911 260 ntBASIC4.52□□□□□ -1.69
COL11A2P13942 AC024589.1-201ENST00000512207 263 ntBASIC4.52□□□□□ -1.69
COL11A2P13942 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
COL11A2P13942 RNU2-27P-201ENST00000516185 142 ntBASIC4.52□□□□□ -1.69
COL11A2P13942 IGJP1-201ENST00000522682 475 ntBASIC4.52□□□□□ -1.69
COL11A2P13942 TRAV15-201ENST00000556680 249 ntBASIC4.52□□□□□ -1.69
COL11A2P13942 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.52□□□□□ -1.69
COL11A2P13942 UBE2V2P2-201ENST00000587677 504 ntBASIC4.52□□□□□ -1.69
COL11A2P13942 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.52□□□□□ -1.69
COL11A2P13942 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.52□□□□□ -1.69
COL11A2P13942 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.52□□□□□ -1.69
COL11A2P13942 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL11A2P13942 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL11A2P13942 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL11A2P13942 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL11A2P13942 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL11A2P13942 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL11A2P13942 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.52□□□□□ -1.69
COL11A2P13942 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
COL11A2P13942 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL11A2P13942 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.52□□□□□ -1.69
COL11A2P13942 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
COL11A2P13942 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL11A2P13942 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL11A2P13942 GTF2H2B-203ENST00000508065 1432 ntBASIC4.52□□□□□ -1.69
COL11A2P13942 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC4.52□□□□□ -1.69
COL11A2P13942 GNG5P1-201ENST00000255500 204 ntBASIC4.52□□□□□ -1.69
COL11A2P13942 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
COL11A2P13942 RNU4-73P-201ENST00000363164 141 ntBASIC4.52□□□□□ -1.69
COL11A2P13942 RNA5SP88-201ENST00000365560 109 ntBASIC4.52□□□□□ -1.69
COL11A2P13942 RNU6-297P-201ENST00000384636 107 ntBASIC4.52□□□□□ -1.69
COL11A2P13942 SNORD17-201ENST00000390930 237 ntBASIC4.52□□□□□ -1.69
COL11A2P13942 AL356057.2-201ENST00000403318 432 ntBASIC4.52□□□□□ -1.69
COL11A2P13942 AC068533.2-201ENST00000411872 306 ntBASIC4.52□□□□□ -1.69
COL11A2P13942 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.52□□□□□ -1.69
COL11A2P13942 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.52□□□□□ -1.69
COL11A2P13942 MTND4LP10-201ENST00000435146 291 ntBASIC4.52□□□□□ -1.69
COL11A2P13942 RPL7P29-201ENST00000437151 728 ntBASIC4.52□□□□□ -1.69
COL11A2P13942 GAPDHP17-201ENST00000449858 1001 ntBASIC4.52□□□□□ -1.69
COL11A2P13942 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.52□□□□□ -1.69
COL11A2P13942 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.52□□□□□ -1.69
COL11A2P13942 MTND1P35-201ENST00000526739 508 ntBASIC4.52□□□□□ -1.69
COL11A2P13942 AP002748.2-201ENST00000528671 348 ntBASIC4.52□□□□□ -1.69
COL11A2P13942 OR5AL2P-201ENST00000532185 920 ntBASIC4.52□□□□□ -1.69
COL11A2P13942 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.52□□□□□ -1.69
COL11A2P13942 POLR2KP1-201ENST00000553226 168 ntBASIC4.52□□□□□ -1.69
COL11A2P13942 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.52□□□□□ -1.69
COL11A2P13942 AP001004.1-201ENST00000582468 324 ntBASIC4.52□□□□□ -1.69
COL11A2P13942 AC010591.1-201ENST00000603941 649 ntBASIC4.52□□□□□ -1.69
COL11A2P13942 AC115621.1-201ENST00000604653 858 ntBASIC4.52□□□□□ -1.69
COL11A2P13942 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.52□□□□□ -1.69
COL11A2P13942 AC079228.1-201ENST00000624774 1049 ntBASIC4.52□□□□□ -1.69
COL11A2P13942 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.52□□□□□ -1.69
COL11A2P13942 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.51□□□□□ -1.69
COL11A2P13942 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC4.51□□□□□ -1.69
COL11A2P13942 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL11A2P13942 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.51□□□□□ -1.69
COL11A2P13942 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms