Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.75□□□□□ -1.81
AP3D1O14617 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.75□□□□□ -1.81
AP3D1O14617 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.75□□□□□ -1.81
AP3D1O14617 AC125611.2-201ENST00000551907 647 ntBASIC3.75□□□□□ -1.81
AP3D1O14617 SETP2-201ENST00000553886 926 ntBASIC3.75□□□□□ -1.81
AP3D1O14617 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.75□□□□□ -1.81
AP3D1O14617 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.75□□□□□ -1.81
AP3D1O14617 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.75□□□□□ -1.81
AP3D1O14617 AC025627.2-201ENST00000576220 160 ntBASIC3.75□□□□□ -1.81
AP3D1O14617 BNIP3P23-201ENST00000599655 511 ntBASIC3.75□□□□□ -1.81
AP3D1O14617 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.75□□□□□ -1.81
AP3D1O14617 AC106900.2-201ENST00000604994 317 ntBASIC3.75□□□□□ -1.81
AP3D1O14617 AL390240.1-201ENST00000612950 384 ntBASIC3.75□□□□□ -1.81
AP3D1O14617 MIR8058-201ENST00000615737 89 ntBASIC3.75□□□□□ -1.81
AP3D1O14617 MIR7151-201ENST00000617477 60 ntBASIC3.75□□□□□ -1.81
AP3D1O14617 AC243312.2-201ENST00000623340 601 ntBASIC3.75□□□□□ -1.81
AP3D1O14617 AC079416.3-201ENST00000624479 549 ntBASIC3.75□□□□□ -1.81
AP3D1O14617 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.75□□□□□ -1.81
AP3D1O14617 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.75□□□□□ -1.81
AP3D1O14617 AC244258.1-201ENST00000637553 1071 ntBASIC3.75□□□□□ -1.81
AP3D1O14617 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.75□□□□□ -1.81
AP3D1O14617 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.75□□□□□ -1.81
AP3D1O14617 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.75□□□□□ -1.81
AP3D1O14617 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
AP3D1O14617 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
AP3D1O14617 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
AP3D1O14617 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
AP3D1O14617 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.74□□□□□ -1.81
AP3D1O14617 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
AP3D1O14617 DEFB108F-201ENST00000344638 222 ntBASIC3.74□□□□□ -1.81
AP3D1O14617 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.74□□□□□ -1.81
AP3D1O14617 RNU6-76P-201ENST00000384060 104 ntBASIC3.74□□□□□ -1.81
AP3D1O14617 AC007066.1-201ENST00000392902 381 ntBASIC3.74□□□□□ -1.81
AP3D1O14617 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.74□□□□□ -1.81
AP3D1O14617 HMGB1P11-201ENST00000413899 637 ntBASIC3.74□□□□□ -1.81
AP3D1O14617 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.74□□□□□ -1.81
AP3D1O14617 AL807761.1-201ENST00000417622 171 ntBASIC3.74□□□□□ -1.81
AP3D1O14617 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.74□□□□□ -1.81
AP3D1O14617 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.74□□□□□ -1.81
AP3D1O14617 PPP1R11P2-201ENST00000423543 382 ntBASIC3.74□□□□□ -1.81
AP3D1O14617 AC092447.3-201ENST00000426027 686 ntBASIC3.74□□□□□ -1.81
AP3D1O14617 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.74□□□□□ -1.81
AP3D1O14617 RPL7P34-201ENST00000433316 712 ntBASIC3.74□□□□□ -1.81
AP3D1O14617 UBE2V1P13-201ENST00000436983 439 ntBASIC3.74□□□□□ -1.81
AP3D1O14617 OR6K1P-201ENST00000456766 971 ntBASIC3.74□□□□□ -1.81
AP3D1O14617 U3.44-201ENST00000458938 192 ntBASIC3.74□□□□□ -1.81
AP3D1O14617 RPL38P1-201ENST00000460914 211 ntBASIC3.74□□□□□ -1.81
AP3D1O14617 AC092754.2-201ENST00000463506 460 ntBASIC3.74□□□□□ -1.81
AP3D1O14617 RPL7L1P8-201ENST00000469911 741 ntBASIC3.74□□□□□ -1.81
AP3D1O14617 RPS3AP22-201ENST00000488297 769 ntBASIC3.74□□□□□ -1.81
AP3D1O14617 OR2A20P-203ENST00000498397 1268 ntBASIC3.74□□□□□ -1.81
AP3D1O14617 AC098862.1-201ENST00000504991 413 ntBASIC3.74□□□□□ -1.81
AP3D1O14617 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.74□□□□□ -1.81
AP3D1O14617 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.74□□□□□ -1.81
AP3D1O14617 MRPS33P3-201ENST00000513456 322 ntBASIC3.74□□□□□ -1.81
AP3D1O14617 SNORA31.22-201ENST00000517204 135 ntBASIC3.74□□□□□ -1.81
AP3D1O14617 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.74□□□□□ -1.81
AP3D1O14617 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.74□□□□□ -1.81
AP3D1O14617 DEFB108D-201ENST00000527787 222 ntBASIC3.74□□□□□ -1.81
AP3D1O14617 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.74□□□□□ -1.81
AP3D1O14617 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.74□□□□□ -1.81
AP3D1O14617 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.74□□□□□ -1.81
AP3D1O14617 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.74□□□□□ -1.81
AP3D1O14617 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
AP3D1O14617 AP005205.1-201ENST00000563503 508 ntBASIC3.74□□□□□ -1.81
AP3D1O14617 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.74□□□□□ -1.81
AP3D1O14617 AC023575.1-201ENST00000580510 358 ntBASIC3.74□□□□□ -1.81
AP3D1O14617 AP001004.1-201ENST00000582468 324 ntBASIC3.74□□□□□ -1.81
AP3D1O14617 MIR5684-201ENST00000585074 65 ntBASIC3.74□□□□□ -1.81
AP3D1O14617 AC105224.1-201ENST00000587055 421 ntBASIC3.74□□□□□ -1.81
AP3D1O14617 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.74□□□□□ -1.81
AP3D1O14617 AC004223.4-201ENST00000612426 332 ntBASIC3.74□□□□□ -1.81
AP3D1O14617 AC009268.2-201ENST00000621925 457 ntBASIC3.74□□□□□ -1.81
AP3D1O14617 AC079597.1-201ENST00000624306 508 ntBASIC3.74□□□□□ -1.81
AP3D1O14617 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.74□□□□□ -1.81
AP3D1O14617 MTND4P16-201ENST00000466108 1367 ntBASIC3.74□□□□□ -1.81
AP3D1O14617 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.74□□□□□ -1.81
AP3D1O14617 AC006378.2-201ENST00000623178 2476 ntBASIC3.73□□□□□ -1.81
AP3D1O14617 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
AP3D1O14617 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
AP3D1O14617 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
AP3D1O14617 ZNF807-201ENST00000328088 1707 ntBASIC3.73□□□□□ -1.81
AP3D1O14617 BDP1P-201ENST00000582658 1990 ntBASIC3.73□□□□□ -1.81
AP3D1O14617 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
AP3D1O14617 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
AP3D1O14617 RNU6-660P-201ENST00000364566 109 ntBASIC3.73□□□□□ -1.81
AP3D1O14617 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
AP3D1O14617 RNU6-637P-201ENST00000384050 107 ntBASIC3.73□□□□□ -1.81
AP3D1O14617 OR6C69P-201ENST00000394268 893 ntBASIC3.73□□□□□ -1.81
AP3D1O14617 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.73□□□□□ -1.81
AP3D1O14617 MTND1P21-201ENST00000412991 285 ntBASIC3.73□□□□□ -1.81
AP3D1O14617 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.73□□□□□ -1.81
AP3D1O14617 ARF4P2-201ENST00000430209 526 ntBASIC3.73□□□□□ -1.81
AP3D1O14617 UBE2D3P1-201ENST00000436669 444 ntBASIC3.73□□□□□ -1.81
AP3D1O14617 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.73□□□□□ -1.81
AP3D1O14617 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.73□□□□□ -1.81
AP3D1O14617 RPS4XP4-201ENST00000443195 763 ntBASIC3.73□□□□□ -1.81
AP3D1O14617 FAM103A2P-201ENST00000444122 354 ntBASIC3.73□□□□□ -1.81
AP3D1O14617 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
AP3D1O14617 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms