Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AL158063.1-201ENST00000615349 536 ntBASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 AC018816.2-201ENST00000621460 353 ntBASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 AC098679.4-201ENST00000624241 654 ntBASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 SAGE4P-201ENST00000442271 3381 ntBASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 AC117529.2-201ENST00000512159 2068 ntBASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SNX9Q9Y5X1 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.98□□□□□ -1.77
SNX9Q9Y5X1 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SNX9Q9Y5X1 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
SNX9Q9Y5X1 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SNX9Q9Y5X1 RNU6-921P-201ENST00000384361 107 ntBASIC3.98□□□□□ -1.77
SNX9Q9Y5X1 SNORA48.7-201ENST00000391302 135 ntBASIC3.98□□□□□ -1.77
SNX9Q9Y5X1 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SNX9Q9Y5X1 BTBD10P2-201ENST00000404779 676 ntBASIC3.98□□□□□ -1.77
SNX9Q9Y5X1 RPL7P8-201ENST00000411964 730 ntBASIC3.98□□□□□ -1.77
SNX9Q9Y5X1 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SNX9Q9Y5X1 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.98□□□□□ -1.77
SNX9Q9Y5X1 SDCBPP2-201ENST00000424643 885 ntBASIC3.98□□□□□ -1.77
SNX9Q9Y5X1 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.98□□□□□ -1.77
SNX9Q9Y5X1 CKS1BP5-201ENST00000434172 273 ntBASIC3.98□□□□□ -1.77
SNX9Q9Y5X1 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.98□□□□□ -1.77
SNX9Q9Y5X1 RPL26P28-201ENST00000451325 435 ntBASIC3.98□□□□□ -1.77
SNX9Q9Y5X1 HMGN3P1-201ENST00000453847 193 ntBASIC3.98□□□□□ -1.77
SNX9Q9Y5X1 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.98□□□□□ -1.77
SNX9Q9Y5X1 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.98□□□□□ -1.77
SNX9Q9Y5X1 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.98□□□□□ -1.77
SNX9Q9Y5X1 DSTNP2-201ENST00000504533 515 ntBASIC3.98□□□□□ -1.77
SNX9Q9Y5X1 PAICSP4-201ENST00000517543 1253 ntBASIC3.98□□□□□ -1.77
SNX9Q9Y5X1 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.98□□□□□ -1.77
SNX9Q9Y5X1 AC008011.1-201ENST00000545989 227 ntBASIC3.98□□□□□ -1.77
SNX9Q9Y5X1 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.98□□□□□ -1.77
SNX9Q9Y5X1 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.98□□□□□ -1.77
SNX9Q9Y5X1 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
SNX9Q9Y5X1 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.98□□□□□ -1.77
SNX9Q9Y5X1 SULT1C2P1-202ENST00000562418 459 ntBASIC3.98□□□□□ -1.77
SNX9Q9Y5X1 AC074051.3-201ENST00000570238 358 ntBASIC3.98□□□□□ -1.77
SNX9Q9Y5X1 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.98□□□□□ -1.77
SNX9Q9Y5X1 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.98□□□□□ -1.77
SNX9Q9Y5X1 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.98□□□□□ -1.77
SNX9Q9Y5X1 AC007687.1-201ENST00000602704 304 ntBASIC3.98□□□□□ -1.77
SNX9Q9Y5X1 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.98□□□□□ -1.77
SNX9Q9Y5X1 BRDTP1-201ENST00000605735 677 ntBASIC3.98□□□□□ -1.77
SNX9Q9Y5X1 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.98□□□□□ -1.77
SNX9Q9Y5X1 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.98□□□□□ -1.77
SNX9Q9Y5X1 AC091905.1-201ENST00000624400 311 ntBASIC3.98□□□□□ -1.77
SNX9Q9Y5X1 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.98□□□□□ -1.77
SNX9Q9Y5X1 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.98□□□□□ -1.77
SNX9Q9Y5X1 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SNX9Q9Y5X1 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.98□□□□□ -1.77
SNX9Q9Y5X1 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
SNX9Q9Y5X1 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SNX9Q9Y5X1 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
SNX9Q9Y5X1 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 LINC00561-201ENST00000565815 2738 ntBASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 AL672167.1-206ENST00000356293 943 ntBASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 RNU6-623P-201ENST00000363143 105 ntBASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 Y_RNA.194-201ENST00000363985 102 ntBASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 RNU6-441P-201ENST00000384545 106 ntBASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 RNU6-253P-201ENST00000384730 105 ntBASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 DSTNP4-201ENST00000399472 474 ntBASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 AL138880.1-201ENST00000405824 642 ntBASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 TPMTP3-201ENST00000411928 735 ntBASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 RPL23AP39-201ENST00000415533 405 ntBASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 AL049610.1-201ENST00000423374 372 ntBASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 OR51AB1P-201ENST00000429046 620 ntBASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 DLGAP5P1-201ENST00000430307 464 ntBASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 RPL36P19-201ENST00000430744 301 ntBASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 AL353706.1-201ENST00000436728 494 ntBASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 LARP1BP3-201ENST00000437229 869 ntBASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 AL138799.3-201ENST00000438968 350 ntBASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 TRIM60P18-201ENST00000441518 828 ntBASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 KATNBL1P6-201ENST00000453433 915 ntBASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 AC072039.1-201ENST00000477611 581 ntBASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 AC078918.1-201ENST00000498515 228 ntBASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 RNU6-1231P-201ENST00000517185 103 ntBASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 AC060788.1-201ENST00000521318 469 ntBASIC3.97□□□□□ -1.77
SNX9Q9Y5X1 DEFB131D-201ENST00000526803 184 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms