Protein–RNA interactions for Protein: Q9Y3E7

CHMP3, Charged multivesicular body protein 3, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3Q9Y3E7 IGLV2-34-201ENST00000490007 283 ntBASIC6.23□□□□□ -1.41
CHMP3Q9Y3E7 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC6.23□□□□□ -1.41
CHMP3Q9Y3E7 AC098976.1-201ENST00000513014 541 ntBASIC6.23□□□□□ -1.41
CHMP3Q9Y3E7 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC6.23□□□□□ -1.41
CHMP3Q9Y3E7 PTP4A1P6-201ENST00000531034 478 ntBASIC6.23□□□□□ -1.41
CHMP3Q9Y3E7 RGS4-209ENST00000531057 544 ntTSL 4 BASIC6.23□□□□□ -1.41
CHMP3Q9Y3E7 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC6.23□□□□□ -1.41
CHMP3Q9Y3E7 AC063950.1-201ENST00000552036 308 ntBASIC6.23□□□□□ -1.41
CHMP3Q9Y3E7 SNRPGP18-201ENST00000553000 214 ntBASIC6.23□□□□□ -1.41
CHMP3Q9Y3E7 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CHMP3Q9Y3E7 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC6.23□□□□□ -1.41
CHMP3Q9Y3E7 AC113194.1-201ENST00000606037 500 ntBASIC6.23□□□□□ -1.41
CHMP3Q9Y3E7 AL022394.1-201ENST00000606979 292 ntBASIC6.23□□□□□ -1.41
CHMP3Q9Y3E7 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC6.23□□□□□ -1.41
CHMP3Q9Y3E7 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CHMP3Q9Y3E7 MIR6748-201ENST00000610433 71 ntBASIC6.23□□□□□ -1.41
CHMP3Q9Y3E7 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC6.23□□□□□ -1.41
CHMP3Q9Y3E7 RNU6-156P-201ENST00000621869 107 ntBASIC6.23□□□□□ -1.41
CHMP3Q9Y3E7 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.23□□□□□ -1.41
CHMP3Q9Y3E7 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CHMP3Q9Y3E7 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CHMP3Q9Y3E7 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC6.23□□□□□ -1.41
CHMP3Q9Y3E7 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CHMP3Q9Y3E7 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
CHMP3Q9Y3E7 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
CHMP3Q9Y3E7 USP44-208ENST00000552440 1818 ntTSL 5 BASIC6.22□□□□□ -1.41
CHMP3Q9Y3E7 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CHMP3Q9Y3E7 ACTR3BP5-201ENST00000448440 1479 ntBASIC6.22□□□□□ -1.41
CHMP3Q9Y3E7 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC6.22□□□□□ -1.41
CHMP3Q9Y3E7 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
CHMP3Q9Y3E7 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
CHMP3Q9Y3E7 AC097714.1-201ENST00000511272 1647 ntBASIC6.22□□□□□ -1.41
CHMP3Q9Y3E7 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
CHMP3Q9Y3E7 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
CHMP3Q9Y3E7 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CHMP3Q9Y3E7 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC6.22□□□□□ -1.41
CHMP3Q9Y3E7 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CHMP3Q9Y3E7 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CHMP3Q9Y3E7 RN7SKP115-201ENST00000363177 317 ntBASIC6.22□□□□□ -1.41
CHMP3Q9Y3E7 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC6.22□□□□□ -1.41
CHMP3Q9Y3E7 COX6CP13-201ENST00000428703 226 ntBASIC6.22□□□□□ -1.41
CHMP3Q9Y3E7 AC093156.1-201ENST00000440382 670 ntBASIC6.22□□□□□ -1.41
CHMP3Q9Y3E7 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC6.22□□□□□ -1.41
CHMP3Q9Y3E7 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC6.22□□□□□ -1.41
CHMP3Q9Y3E7 TRAPPC2P3-201ENST00000443200 321 ntBASIC6.22□□□□□ -1.41
CHMP3Q9Y3E7 AC104073.1-201ENST00000451988 151 ntBASIC6.22□□□□□ -1.41
CHMP3Q9Y3E7 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC6.22□□□□□ -1.41
CHMP3Q9Y3E7 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC6.22□□□□□ -1.41
CHMP3Q9Y3E7 AC005726.1-201ENST00000494679 427 ntBASIC6.22□□□□□ -1.41
CHMP3Q9Y3E7 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC6.22□□□□□ -1.41
CHMP3Q9Y3E7 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC6.22□□□□□ -1.41
CHMP3Q9Y3E7 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC6.22□□□□□ -1.41
CHMP3Q9Y3E7 RPL21P12-201ENST00000559810 515 ntBASIC6.22□□□□□ -1.41
CHMP3Q9Y3E7 AL031666.3-201ENST00000609320 1006 ntBASIC6.22□□□□□ -1.41
CHMP3Q9Y3E7 AC103710.2-201ENST00000609912 942 ntBASIC6.22□□□□□ -1.41
CHMP3Q9Y3E7 AC019206.1-201ENST00000621938 425 ntBASIC6.22□□□□□ -1.41
CHMP3Q9Y3E7 AC007792.1-201ENST00000623023 402 ntBASIC6.22□□□□□ -1.41
CHMP3Q9Y3E7 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC6.22□□□□□ -1.41
CHMP3Q9Y3E7 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC6.22□□□□□ -1.41
CHMP3Q9Y3E7 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC6.22□□□□□ -1.41
CHMP3Q9Y3E7 AC073136.1-201ENST00000449426 2884 ntBASIC6.22□□□□□ -1.41
CHMP3Q9Y3E7 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CHMP3Q9Y3E7 SAMMSON-226ENST00000642089 1582 ntBASIC6.22□□□□□ -1.41
CHMP3Q9Y3E7 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CHMP3Q9Y3E7 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CHMP3Q9Y3E7 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CHMP3Q9Y3E7 AC130650.2-201ENST00000618736 2403 ntBASIC6.21□□□□□ -1.41
CHMP3Q9Y3E7 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC6.21□□□□□ -1.41
CHMP3Q9Y3E7 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.41
CHMP3Q9Y3E7 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
CHMP3Q9Y3E7 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CHMP3Q9Y3E7 AC011460.1-201ENST00000636268 1834 ntBASIC6.21□□□□□ -1.42
CHMP3Q9Y3E7 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CHMP3Q9Y3E7 RNA5SP191-201ENST00000362585 102 ntBASIC6.21□□□□□ -1.42
CHMP3Q9Y3E7 RNU6-97P-201ENST00000363387 104 ntBASIC6.21□□□□□ -1.42
CHMP3Q9Y3E7 U3.12-201ENST00000364498 214 ntBASIC6.21□□□□□ -1.42
CHMP3Q9Y3E7 RNU6-505P-201ENST00000384427 107 ntBASIC6.21□□□□□ -1.42
CHMP3Q9Y3E7 MIR92A2-201ENST00000385299 75 ntBASIC6.21□□□□□ -1.42
CHMP3Q9Y3E7 RNU6-1106P-201ENST00000390845 107 ntBASIC6.21□□□□□ -1.42
CHMP3Q9Y3E7 U3.20-201ENST00000390909 217 ntBASIC6.21□□□□□ -1.42
CHMP3Q9Y3E7 MIR548K-201ENST00000408406 116 ntBASIC6.21□□□□□ -1.42
CHMP3Q9Y3E7 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC6.21□□□□□ -1.42
CHMP3Q9Y3E7 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC6.21□□□□□ -1.42
CHMP3Q9Y3E7 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC6.21□□□□□ -1.42
CHMP3Q9Y3E7 RPL7P52-201ENST00000449200 742 ntBASIC6.21□□□□□ -1.42
CHMP3Q9Y3E7 AL118520.1-201ENST00000450770 291 ntBASIC6.21□□□□□ -1.42
CHMP3Q9Y3E7 CBX1P2-201ENST00000453841 458 ntBASIC6.21□□□□□ -1.42
CHMP3Q9Y3E7 CDH12P4-201ENST00000517835 295 ntBASIC6.21□□□□□ -1.42
CHMP3Q9Y3E7 CDH12P3-201ENST00000517935 295 ntBASIC6.21□□□□□ -1.42
CHMP3Q9Y3E7 CDH12P1-201ENST00000518435 295 ntBASIC6.21□□□□□ -1.42
CHMP3Q9Y3E7 AC022634.1-201ENST00000520765 532 ntBASIC6.21□□□□□ -1.42
CHMP3Q9Y3E7 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC6.21□□□□□ -1.42
CHMP3Q9Y3E7 NDUFB4P11-201ENST00000560510 395 ntBASIC6.21□□□□□ -1.42
CHMP3Q9Y3E7 MIR4424-201ENST00000585257 86 ntBASIC6.21□□□□□ -1.42
CHMP3Q9Y3E7 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.21□□□□□ -1.42
CHMP3Q9Y3E7 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.21□□□□□ -1.42
CHMP3Q9Y3E7 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CHMP3Q9Y3E7 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC6.21□□□□□ -1.42
CHMP3Q9Y3E7 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC6.21□□□□□ -1.42
CHMP3Q9Y3E7 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms