Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC087385.1-201ENST00000475062 312 ntBASIC5.71□□□□□ -1.5
COL25A1Q9BXS0 SERF1AP1-201ENST00000514575 187 ntBASIC5.71□□□□□ -1.5
COL25A1Q9BXS0 RNA5SP464-201ENST00000516251 108 ntBASIC5.71□□□□□ -1.5
COL25A1Q9BXS0 RNU6-1338P-201ENST00000516328 91 ntBASIC5.71□□□□□ -1.5
COL25A1Q9BXS0 RNA5SP143-201ENST00000516936 115 ntBASIC5.71□□□□□ -1.5
COL25A1Q9BXS0 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC5.71□□□□□ -1.5
COL25A1Q9BXS0 AC012339.2-201ENST00000523996 453 ntBASIC5.71□□□□□ -1.5
COL25A1Q9BXS0 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.71□□□□□ -1.5
COL25A1Q9BXS0 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.71□□□□□ -1.5
COL25A1Q9BXS0 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.71□□□□□ -1.5
COL25A1Q9BXS0 AL451044.1-201ENST00000604867 238 ntBASIC5.71□□□□□ -1.5
COL25A1Q9BXS0 AC072026.1-201ENST00000605023 201 ntBASIC5.71□□□□□ -1.5
COL25A1Q9BXS0 AC006133.1-201ENST00000617106 264 ntBASIC5.71□□□□□ -1.5
COL25A1Q9BXS0 TEX41-280ENST00000629185 591 ntTSL 5 BASIC5.71□□□□□ -1.5
COL25A1Q9BXS0 CDRT1-208ENST00000630868 794 ntBASIC5.71□□□□□ -1.5
COL25A1Q9BXS0 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
COL25A1Q9BXS0 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.71□□□□□ -1.5
COL25A1Q9BXS0 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL25A1Q9BXS0 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
COL25A1Q9BXS0 NXPH1-205ENST00000602349 1953 ntBASIC5.71□□□□□ -1.5
COL25A1Q9BXS0 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
COL25A1Q9BXS0 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
COL25A1Q9BXS0 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL25A1Q9BXS0 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
COL25A1Q9BXS0 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL25A1Q9BXS0 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 AC097063.1-201ENST00000426714 1797 ntBASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 AC016251.2-201ENST00000623393 3089 ntBASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 RNU5B-2P-201ENST00000363036 113 ntBASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 RNU6-97P-201ENST00000363387 104 ntBASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 Y_RNA.234-201ENST00000364409 97 ntBASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 RNU6-44P-201ENST00000384045 107 ntBASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 RNU4ATAC2P-201ENST00000408674 126 ntBASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 EIF4EP2-201ENST00000422816 654 ntBASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 PRUNEP1-201ENST00000425846 705 ntBASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 RPL37P1-201ENST00000432310 284 ntBASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 UBE2V1P13-201ENST00000436983 439 ntBASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 SNORA67.7-201ENST00000516664 135 ntBASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 RNA5SP400-201ENST00000517155 111 ntBASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 AF186190.1-201ENST00000517470 480 ntBASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 AC024940.3-201ENST00000538551 316 ntBASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 AC005341.1-201ENST00000571086 708 ntBASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 AC091042.1-201ENST00000579213 173 ntBASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 AC006023.2-201ENST00000609916 167 ntBASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 AC034229.6-201ENST00000623704 224 ntBASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 CASC19-204ENST00000641001 2055 ntBASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
COL25A1Q9BXS0 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 RNU6-153P-201ENST00000364422 104 ntBASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 AL133388.1-201ENST00000404509 287 ntBASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 RNU6-394P-201ENST00000410735 107 ntBASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 RN7SKP51-201ENST00000410781 304 ntBASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 RNU6-387P-201ENST00000411331 105 ntBASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 AC140479.3-201ENST00000418944 1126 ntBASIC5.69□□□□□ -1.5
COL25A1Q9BXS0 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms