Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC1.84□□□□□ -2.11
SPENQ96T58 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.11
SPENQ96T58 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
SPENQ96T58 AL023807.1-201ENST00000407932 359 ntBASIC1.84□□□□□ -2.12
SPENQ96T58 AL445669.2-201ENST00000454425 421 ntBASIC1.84□□□□□ -2.12
SPENQ96T58 RPL9P33-201ENST00000484311 566 ntBASIC1.84□□□□□ -2.12
SPENQ96T58 SUB1P3-201ENST00000564581 315 ntBASIC1.84□□□□□ -2.12
SPENQ96T58 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.84□□□□□ -2.12
SPENQ96T58 BMS1P7-201ENST00000602440 1052 ntBASIC1.84□□□□□ -2.12
SPENQ96T58 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
SPENQ96T58 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
SPENQ96T58 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
SPENQ96T58 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.12
SPENQ96T58 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC1.84□□□□□ -2.12
SPENQ96T58 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
SPENQ96T58 RNU1-91P-201ENST00000364746 163 ntBASIC1.84□□□□□ -2.12
SPENQ96T58 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC1.84□□□□□ -2.12
SPENQ96T58 CACYBPP1-201ENST00000438592 684 ntBASIC1.84□□□□□ -2.12
SPENQ96T58 AC092185.1-201ENST00000491371 97 ntBASIC1.84□□□□□ -2.12
SPENQ96T58 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC1.84□□□□□ -2.12
SPENQ96T58 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.84□□□□□ -2.12
SPENQ96T58 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC1.84□□□□□ -2.12
SPENQ96T58 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.84□□□□□ -2.12
SPENQ96T58 AC010546.1-201ENST00000569391 485 ntBASIC1.84□□□□□ -2.12
SPENQ96T58 AC007620.3-201ENST00000608131 497 ntBASIC1.84□□□□□ -2.12
SPENQ96T58 AC092650.2-201ENST00000619984 902 ntBASIC1.84□□□□□ -2.12
SPENQ96T58 CYP3A51P-201ENST00000633513 256 ntBASIC1.84□□□□□ -2.12
SPENQ96T58 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SPENQ96T58 AL445437.1-201ENST00000623157 3087 ntBASIC1.83□□□□□ -2.12
SPENQ96T58 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
SPENQ96T58 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.83□□□□□ -2.12
SPENQ96T58 MTATP6P11-201ENST00000428071 670 ntBASIC1.83□□□□□ -2.12
SPENQ96T58 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC1.83□□□□□ -2.12
SPENQ96T58 RPL21P134-201ENST00000453468 483 ntBASIC1.83□□□□□ -2.12
SPENQ96T58 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC1.83□□□□□ -2.12
SPENQ96T58 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC1.83□□□□□ -2.12
SPENQ96T58 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
SPENQ96T58 ANKRD62P1-201ENST00000434304 1623 ntBASIC1.83□□□□□ -2.12
SPENQ96T58 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
SPENQ96T58 SNORD21-201ENST00000383953 95 ntBASIC1.83□□□□□ -2.12
SPENQ96T58 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC1.83□□□□□ -2.12
SPENQ96T58 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.83□□□□□ -2.12
SPENQ96T58 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC1.83□□□□□ -2.12
SPENQ96T58 MIR3683-201ENST00000580847 82 ntBASIC1.83□□□□□ -2.12
SPENQ96T58 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
SPENQ96T58 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
SPENQ96T58 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
SPENQ96T58 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
SPENQ96T58 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
SPENQ96T58 TTN-204ENST00000360870 18218 ntTSL 5 BASIC1.83□□□□□ -2.12
SPENQ96T58 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.83□□□□□ -2.12
SPENQ96T58 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SPENQ96T58 AC005005.2-201ENST00000420779 380 ntBASIC1.82□□□□□ -2.12
SPENQ96T58 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.82□□□□□ -2.12
SPENQ96T58 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.82□□□□□ -2.12
SPENQ96T58 POU5F1P7-201ENST00000508759 541 ntBASIC1.82□□□□□ -2.12
SPENQ96T58 IGLV3-17-201ENST00000519099 244 ntBASIC1.82□□□□□ -2.12
SPENQ96T58 HMGN2P47-201ENST00000559378 272 ntBASIC1.82□□□□□ -2.12
SPENQ96T58 AC084035.1-201ENST00000634543 607 ntBASIC1.82□□□□□ -2.12
SPENQ96T58 MIR7153-201ENST00000637758 57 ntBASIC1.82□□□□□ -2.12
SPENQ96T58 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
SPENQ96T58 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
SPENQ96T58 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
SPENQ96T58 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC1.82□□□□□ -2.12
SPENQ96T58 Y_RNA.354-201ENST00000365448 111 ntBASIC1.82□□□□□ -2.12
SPENQ96T58 AC234782.4-201ENST00000417646 1048 ntBASIC1.82□□□□□ -2.12
SPENQ96T58 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.82□□□□□ -2.12
SPENQ96T58 LAMTOR5P1-201ENST00000444290 270 ntBASIC1.82□□□□□ -2.12
SPENQ96T58 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
SPENQ96T58 DCAF13P1-201ENST00000495256 1330 ntBASIC1.82□□□□□ -2.12
SPENQ96T58 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
SPENQ96T58 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC1.82□□□□□ -2.12
SPENQ96T58 SDCBPP3-201ENST00000419629 891 ntBASIC1.82□□□□□ -2.12
SPENQ96T58 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC1.82□□□□□ -2.12
SPENQ96T58 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.82□□□□□ -2.12
SPENQ96T58 RN7SKP40-201ENST00000517211 242 ntBASIC1.82□□□□□ -2.12
SPENQ96T58 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC1.82□□□□□ -2.12
SPENQ96T58 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.82□□□□□ -2.12
SPENQ96T58 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
SPENQ96T58 HSP90AA5P-201ENST00000438353 2192 ntBASIC1.82□□□□□ -2.12
SPENQ96T58 MTCO1P7-201ENST00000419523 1542 ntBASIC1.82□□□□□ -2.12
SPENQ96T58 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
SPENQ96T58 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
SPENQ96T58 AC008173.1-201ENST00000418901 264 ntBASIC1.81□□□□□ -2.12
SPENQ96T58 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
SPENQ96T58 AC110588.1-201ENST00000559699 137 ntBASIC1.81□□□□□ -2.12
SPENQ96T58 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.81□□□□□ -2.12
SPENQ96T58 AC244517.1-201ENST00000606030 2086 ntBASIC1.81□□□□□ -2.12
SPENQ96T58 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
SPENQ96T58 MTND5P23-201ENST00000430812 1655 ntBASIC1.81□□□□□ -2.12
SPENQ96T58 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
SPENQ96T58 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
SPENQ96T58 MIR142-201ENST00000384835 87 ntBASIC1.81□□□□□ -2.12
SPENQ96T58 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC1.81□□□□□ -2.12
SPENQ96T58 GAPDHP27-201ENST00000447427 1020 ntBASIC1.81□□□□□ -2.12
SPENQ96T58 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.81□□□□□ -2.12
SPENQ96T58 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC1.81□□□□□ -2.12
SPENQ96T58 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.81□□□□□ -2.12
SPENQ96T58 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.81□□□□□ -2.12
SPENQ96T58 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms