Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.89□□□□□ -1.95
HMGCS1Q01581 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.89□□□□□ -1.95
HMGCS1Q01581 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
HMGCS1Q01581 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.88□□□□□ -1.95
HMGCS1Q01581 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
HMGCS1Q01581 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.88□□□□□ -1.95
HMGCS1Q01581 MIR22-201ENST00000362190 85 ntBASIC2.88□□□□□ -1.95
HMGCS1Q01581 RNU6-50P-201ENST00000362356 103 ntBASIC2.88□□□□□ -1.95
HMGCS1Q01581 RNU6-263P-201ENST00000363811 107 ntBASIC2.88□□□□□ -1.95
HMGCS1Q01581 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
HMGCS1Q01581 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
HMGCS1Q01581 RNU6-921P-201ENST00000384361 107 ntBASIC2.88□□□□□ -1.95
HMGCS1Q01581 RNU6-1176P-201ENST00000390955 107 ntBASIC2.88□□□□□ -1.95
HMGCS1Q01581 RPL31P1-201ENST00000398116 372 ntBASIC2.88□□□□□ -1.95
HMGCS1Q01581 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.88□□□□□ -1.95
HMGCS1Q01581 BTF3P8-201ENST00000414577 526 ntBASIC2.88□□□□□ -1.95
HMGCS1Q01581 RPS3AP9-201ENST00000417027 792 ntBASIC2.88□□□□□ -1.95
HMGCS1Q01581 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.88□□□□□ -1.95
HMGCS1Q01581 AC233981.1-201ENST00000423224 461 ntBASIC2.88□□□□□ -1.95
HMGCS1Q01581 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.88□□□□□ -1.95
HMGCS1Q01581 AC114973.1-201ENST00000429057 632 ntBASIC2.88□□□□□ -1.95
HMGCS1Q01581 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.88□□□□□ -1.95
HMGCS1Q01581 RPL23AP69-201ENST00000431134 458 ntBASIC2.88□□□□□ -1.95
HMGCS1Q01581 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.88□□□□□ -1.95
HMGCS1Q01581 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.88□□□□□ -1.95
HMGCS1Q01581 RPL21P8-201ENST00000465083 535 ntBASIC2.88□□□□□ -1.95
HMGCS1Q01581 RPS3AP43-201ENST00000479743 781 ntBASIC2.88□□□□□ -1.95
HMGCS1Q01581 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
HMGCS1Q01581 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
HMGCS1Q01581 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
HMGCS1Q01581 MTND4LP22-201ENST00000508209 276 ntBASIC2.88□□□□□ -1.95
HMGCS1Q01581 AC048346.1-201ENST00000510247 144 ntBASIC2.88□□□□□ -1.95
HMGCS1Q01581 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
HMGCS1Q01581 RNU1-61P-201ENST00000516107 151 ntBASIC2.88□□□□□ -1.95
HMGCS1Q01581 RNU6-885P-201ENST00000516607 104 ntBASIC2.88□□□□□ -1.95
HMGCS1Q01581 RNA5SP468-201ENST00000516782 93 ntBASIC2.88□□□□□ -1.95
HMGCS1Q01581 snoZ278.1-201ENST00000517059 112 ntBASIC2.88□□□□□ -1.95
HMGCS1Q01581 SNORA31.20-201ENST00000517111 133 ntBASIC2.88□□□□□ -1.95
HMGCS1Q01581 RNA5SP380-201ENST00000517190 98 ntBASIC2.88□□□□□ -1.95
HMGCS1Q01581 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.88□□□□□ -1.95
HMGCS1Q01581 AP000790.1-201ENST00000528891 737 ntBASIC2.88□□□□□ -1.95
HMGCS1Q01581 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.88□□□□□ -1.95
HMGCS1Q01581 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.88□□□□□ -1.95
HMGCS1Q01581 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.88□□□□□ -1.95
HMGCS1Q01581 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.88□□□□□ -1.95
HMGCS1Q01581 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.88□□□□□ -1.95
HMGCS1Q01581 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.88□□□□□ -1.95
HMGCS1Q01581 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.88□□□□□ -1.95
HMGCS1Q01581 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.88□□□□□ -1.95
HMGCS1Q01581 AP003476.1-201ENST00000623984 516 ntBASIC2.88□□□□□ -1.95
HMGCS1Q01581 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.88□□□□□ -1.95
HMGCS1Q01581 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.88□□□□□ -1.95
HMGCS1Q01581 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.88□□□□□ -1.95
HMGCS1Q01581 AC068620.4-201ENST00000636730 1182 ntBASIC2.88□□□□□ -1.95
HMGCS1Q01581 FAM35CP-201ENST00000554755 2470 ntBASIC2.88□□□□□ -1.95
HMGCS1Q01581 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
HMGCS1Q01581 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
HMGCS1Q01581 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
HMGCS1Q01581 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.88□□□□□ -1.95
HMGCS1Q01581 AC117529.2-201ENST00000512159 2068 ntBASIC2.88□□□□□ -1.95
HMGCS1Q01581 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HMGCS1Q01581 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HMGCS1Q01581 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HMGCS1Q01581 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.87□□□□□ -1.95
HMGCS1Q01581 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HMGCS1Q01581 RNU6-582P-201ENST00000362989 107 ntBASIC2.87□□□□□ -1.95
HMGCS1Q01581 SNORA54-201ENST00000384281 123 ntBASIC2.87□□□□□ -1.95
HMGCS1Q01581 SNORD116-23-201ENST00000384645 92 ntBASIC2.87□□□□□ -1.95
HMGCS1Q01581 MT-TC-201ENST00000387405 66 ntBASIC2.87□□□□□ -1.95
HMGCS1Q01581 RPL7P27-201ENST00000403775 720 ntBASIC2.87□□□□□ -1.95
HMGCS1Q01581 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
HMGCS1Q01581 RPL7P8-201ENST00000411964 730 ntBASIC2.87□□□□□ -1.95
HMGCS1Q01581 MTCYBP32-201ENST00000427945 1084 ntBASIC2.87□□□□□ -1.95
HMGCS1Q01581 AL512649.1-201ENST00000428997 581 ntBASIC2.87□□□□□ -1.95
HMGCS1Q01581 AC244505.4-201ENST00000434905 287 ntBASIC2.87□□□□□ -1.95
HMGCS1Q01581 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.87□□□□□ -1.95
HMGCS1Q01581 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.87□□□□□ -1.95
HMGCS1Q01581 SSXP5-201ENST00000443473 287 ntBASIC2.87□□□□□ -1.95
HMGCS1Q01581 RPS3AP12-201ENST00000443616 753 ntBASIC2.87□□□□□ -1.95
HMGCS1Q01581 COX6CP18-201ENST00000448769 222 ntBASIC2.87□□□□□ -1.95
HMGCS1Q01581 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.87□□□□□ -1.95
HMGCS1Q01581 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.87□□□□□ -1.95
HMGCS1Q01581 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.87□□□□□ -1.95
HMGCS1Q01581 AC008427.1-201ENST00000503102 655 ntBASIC2.87□□□□□ -1.95
HMGCS1Q01581 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.87□□□□□ -1.95
HMGCS1Q01581 RN7SKP57-201ENST00000517248 293 ntBASIC2.87□□□□□ -1.95
HMGCS1Q01581 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.87□□□□□ -1.95
HMGCS1Q01581 AC104417.1-201ENST00000523974 751 ntBASIC2.87□□□□□ -1.95
HMGCS1Q01581 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.87□□□□□ -1.95
HMGCS1Q01581 OR8K4P-201ENST00000534608 872 ntBASIC2.87□□□□□ -1.95
HMGCS1Q01581 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.87□□□□□ -1.95
HMGCS1Q01581 AC087897.1-201ENST00000550134 156 ntBASIC2.87□□□□□ -1.95
HMGCS1Q01581 TRAV37-201ENST00000553906 342 ntBASIC2.87□□□□□ -1.95
HMGCS1Q01581 AC044913.1-201ENST00000557200 430 ntBASIC2.87□□□□□ -1.95
HMGCS1Q01581 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC2.87□□□□□ -1.95
HMGCS1Q01581 AC055876.1-202ENST00000567053 138 ntBASIC2.87□□□□□ -1.95
HMGCS1Q01581 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HMGCS1Q01581 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.87□□□□□ -1.95
HMGCS1Q01581 SNORD39.3-201ENST00000584451 71 ntBASIC2.87□□□□□ -1.95
HMGCS1Q01581 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms