Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC012498.1-201ENST00000424037 437 ntBASIC3.16□□□□□ -1.9
CDH4P55283 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH4P55283 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH4P55283 MTATP6P11-201ENST00000428071 670 ntBASIC3.16□□□□□ -1.9
CDH4P55283 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.16□□□□□ -1.9
CDH4P55283 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.16□□□□□ -1.9
CDH4P55283 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.16□□□□□ -1.9
CDH4P55283 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.16□□□□□ -1.9
CDH4P55283 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH4P55283 AC091860.1-201ENST00000505723 432 ntBASIC3.16□□□□□ -1.9
CDH4P55283 AC008628.1-201ENST00000508663 265 ntBASIC3.16□□□□□ -1.9
CDH4P55283 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH4P55283 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDH4P55283 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH4P55283 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.16□□□□□ -1.9
CDH4P55283 AP002404.1-201ENST00000532005 451 ntBASIC3.16□□□□□ -1.9
CDH4P55283 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDH4P55283 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.16□□□□□ -1.9
CDH4P55283 AP001542.2-201ENST00000593141 364 ntBASIC3.16□□□□□ -1.9
CDH4P55283 AL110115.1-201ENST00000614396 364 ntBASIC3.16□□□□□ -1.9
CDH4P55283 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.16□□□□□ -1.9
CDH4P55283 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
CDH4P55283 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH4P55283 AC002546.1-201ENST00000588041 2504 ntBASIC3.16□□□□□ -1.9
CDH4P55283 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
CDH4P55283 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.15□□□□□ -1.9
CDH4P55283 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CDH4P55283 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.15□□□□□ -1.9
CDH4P55283 AL353743.1-202ENST00000431724 1695 ntBASIC3.15□□□□□ -1.9
CDH4P55283 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.15□□□□□ -1.91
CDH4P55283 MIR22-201ENST00000362190 85 ntBASIC3.15□□□□□ -1.91
CDH4P55283 SNORA71.1-201ENST00000364523 117 ntBASIC3.15□□□□□ -1.91
CDH4P55283 RNU6-805P-201ENST00000365643 106 ntBASIC3.15□□□□□ -1.91
CDH4P55283 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
CDH4P55283 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
CDH4P55283 SNORA54-201ENST00000384281 123 ntBASIC3.15□□□□□ -1.91
CDH4P55283 SAR1AP2-201ENST00000392696 594 ntBASIC3.15□□□□□ -1.91
CDH4P55283 RPL22P22-201ENST00000395439 379 ntBASIC3.15□□□□□ -1.91
CDH4P55283 AL024474.1-201ENST00000404655 591 ntBASIC3.15□□□□□ -1.91
CDH4P55283 AL138885.1-201ENST00000405921 675 ntBASIC3.15□□□□□ -1.91
CDH4P55283 AL133264.1-201ENST00000407157 562 ntBASIC3.15□□□□□ -1.91
CDH4P55283 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.15□□□□□ -1.91
CDH4P55283 DUTP6-201ENST00000425573 462 ntBASIC3.15□□□□□ -1.91
CDH4P55283 AC011242.1-201ENST00000433596 1158 ntBASIC3.15□□□□□ -1.91
CDH4P55283 CYCSP32-201ENST00000440548 321 ntBASIC3.15□□□□□ -1.91
CDH4P55283 HSPE1P28-201ENST00000443139 211 ntBASIC3.15□□□□□ -1.91
CDH4P55283 SEPT14P24-201ENST00000447236 180 ntBASIC3.15□□□□□ -1.91
CDH4P55283 HMGB1P25-201ENST00000468402 607 ntBASIC3.15□□□□□ -1.91
CDH4P55283 AC096751.1-202ENST00000502691 1067 ntBASIC3.15□□□□□ -1.91
CDH4P55283 AC021146.5-201ENST00000503544 545 ntBASIC3.15□□□□□ -1.91
CDH4P55283 MLLT10P2-201ENST00000506434 249 ntBASIC3.15□□□□□ -1.91
CDH4P55283 AC105914.1-201ENST00000511798 226 ntBASIC3.15□□□□□ -1.91
CDH4P55283 RNA5SP341-201ENST00000516261 117 ntBASIC3.15□□□□□ -1.91
CDH4P55283 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.15□□□□□ -1.91
CDH4P55283 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.15□□□□□ -1.91
CDH4P55283 AP003168.1-201ENST00000530091 307 ntBASIC3.15□□□□□ -1.91
CDH4P55283 SNRPGP16-201ENST00000533275 226 ntBASIC3.15□□□□□ -1.91
CDH4P55283 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.15□□□□□ -1.91
CDH4P55283 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CDH4P55283 COX6CP3-201ENST00000580869 223 ntBASIC3.15□□□□□ -1.91
CDH4P55283 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.15□□□□□ -1.91
CDH4P55283 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.15□□□□□ -1.91
CDH4P55283 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.15□□□□□ -1.91
CDH4P55283 AL133393.1-201ENST00000603277 287 ntBASIC3.15□□□□□ -1.91
CDH4P55283 AC107294.3-201ENST00000609211 526 ntBASIC3.15□□□□□ -1.91
CDH4P55283 VIS1.1-201ENST00000610517 203 ntBASIC3.15□□□□□ -1.91
CDH4P55283 AL162274.2-201ENST00000614406 332 ntBASIC3.15□□□□□ -1.91
CDH4P55283 AC068831.7-201ENST00000616954 363 ntBASIC3.15□□□□□ -1.91
CDH4P55283 AL512506.2-201ENST00000624472 458 ntBASIC3.15□□□□□ -1.91
CDH4P55283 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.15□□□□□ -1.91
CDH4P55283 ZNF663P-202ENST00000641770 1131 ntBASIC3.15□□□□□ -1.91
CDH4P55283 NUP58P1-201ENST00000502546 1738 ntBASIC3.15□□□□□ -1.91
CDH4P55283 FAM35CP-201ENST00000554755 2470 ntBASIC3.15□□□□□ -1.91
CDH4P55283 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
CDH4P55283 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.15□□□□□ -1.91
CDH4P55283 AC010733.2-201ENST00000589496 5702 ntBASIC3.14□□□□□ -1.91
CDH4P55283 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDH4P55283 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.14□□□□□ -1.91
CDH4P55283 RNU6-251P-201ENST00000363235 104 ntBASIC3.14□□□□□ -1.91
CDH4P55283 RNU6-839P-201ENST00000363347 108 ntBASIC3.14□□□□□ -1.91
CDH4P55283 SNORA48.5-201ENST00000391143 135 ntBASIC3.14□□□□□ -1.91
CDH4P55283 AC092447.6-201ENST00000414578 210 ntBASIC3.14□□□□□ -1.91
CDH4P55283 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.14□□□□□ -1.91
CDH4P55283 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.14□□□□□ -1.91
CDH4P55283 AC012497.1-201ENST00000429392 575 ntBASIC3.14□□□□□ -1.91
CDH4P55283 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.14□□□□□ -1.91
CDH4P55283 AL096829.2-201ENST00000446582 742 ntBASIC3.14□□□□□ -1.91
CDH4P55283 AC017099.1-201ENST00000448261 1028 ntBASIC3.14□□□□□ -1.91
CDH4P55283 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.14□□□□□ -1.91
CDH4P55283 AC104308.1-201ENST00000454621 333 ntBASIC3.14□□□□□ -1.91
CDH4P55283 RPS26P21-201ENST00000475397 348 ntBASIC3.14□□□□□ -1.91
CDH4P55283 HMGN2P13-201ENST00000476476 274 ntBASIC3.14□□□□□ -1.91
CDH4P55283 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.14□□□□□ -1.91
CDH4P55283 AC068724.1-201ENST00000487100 792 ntBASIC3.14□□□□□ -1.91
CDH4P55283 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CDH4P55283 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.14□□□□□ -1.91
CDH4P55283 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CDH4P55283 RN7SKP272-201ENST00000516988 232 ntBASIC3.14□□□□□ -1.91
CDH4P55283 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CDH4P55283 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms