Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
COL9A1P20849 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL9A1P20849 Y_RNA.215-201ENST00000364204 112 ntBASIC6.37□□□□□ -1.39
COL9A1P20849 Y_RNA.405-201ENST00000383979 100 ntBASIC6.37□□□□□ -1.39
COL9A1P20849 Y_RNA.451-201ENST00000384200 100 ntBASIC6.37□□□□□ -1.39
COL9A1P20849 Y_RNA.524-201ENST00000384564 100 ntBASIC6.37□□□□□ -1.39
COL9A1P20849 Y_RNA.561-201ENST00000384694 100 ntBASIC6.37□□□□□ -1.39
COL9A1P20849 MIR765-201ENST00000390226 114 ntBASIC6.37□□□□□ -1.39
COL9A1P20849 HSPA8P15-201ENST00000401676 786 ntBASIC6.37□□□□□ -1.39
COL9A1P20849 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC6.37□□□□□ -1.39
COL9A1P20849 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.37□□□□□ -1.39
COL9A1P20849 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.37□□□□□ -1.39
COL9A1P20849 AC022431.1-201ENST00000450941 438 ntBASIC6.37□□□□□ -1.39
COL9A1P20849 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC6.37□□□□□ -1.39
COL9A1P20849 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.37□□□□□ -1.39
COL9A1P20849 AC010683.1-201ENST00000473673 378 ntBASIC6.37□□□□□ -1.39
COL9A1P20849 MTND6P8-201ENST00000503471 522 ntBASIC6.37□□□□□ -1.39
COL9A1P20849 HMGN1P11-201ENST00000508668 303 ntBASIC6.37□□□□□ -1.39
COL9A1P20849 RNU7-175P-201ENST00000515915 61 ntBASIC6.37□□□□□ -1.39
COL9A1P20849 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC6.37□□□□□ -1.39
COL9A1P20849 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.37□□□□□ -1.39
COL9A1P20849 AL355812.1-201ENST00000603215 216 ntBASIC6.37□□□□□ -1.39
COL9A1P20849 AC123912.5-201ENST00000605470 343 ntBASIC6.37□□□□□ -1.39
COL9A1P20849 MIR6837-201ENST00000620884 64 ntBASIC6.37□□□□□ -1.39
COL9A1P20849 AL136228.1-201ENST00000622221 319 ntBASIC6.37□□□□□ -1.39
COL9A1P20849 AC008785.1-201ENST00000624475 456 ntBASIC6.37□□□□□ -1.39
COL9A1P20849 AL136531.3-201ENST00000624378 3658 ntBASIC6.37□□□□□ -1.39
COL9A1P20849 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.37□□□□□ -1.39
COL9A1P20849 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COL9A1P20849 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL9A1P20849 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC6.37□□□□□ -1.39
COL9A1P20849 MROH3P-201ENST00000435735 2676 ntBASIC6.37□□□□□ -1.39
COL9A1P20849 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.37□□□□□ -1.39
COL9A1P20849 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL9A1P20849 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
COL9A1P20849 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL9A1P20849 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COL9A1P20849 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL9A1P20849 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL9A1P20849 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL9A1P20849 AC062022.1-201ENST00000451026 1684 ntBASIC6.36□□□□□ -1.39
COL9A1P20849 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL9A1P20849 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.36□□□□□ -1.39
COL9A1P20849 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL9A1P20849 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC6.36□□□□□ -1.39
COL9A1P20849 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL9A1P20849 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.36□□□□□ -1.39
COL9A1P20849 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL9A1P20849 MIR640-201ENST00000385086 96 ntBASIC6.36□□□□□ -1.39
COL9A1P20849 RNU2-21P-201ENST00000410368 188 ntBASIC6.36□□□□□ -1.39
COL9A1P20849 RNU5E-9P-201ENST00000411164 104 ntBASIC6.36□□□□□ -1.39
COL9A1P20849 BMS1P17-202ENST00000416720 316 ntBASIC6.36□□□□□ -1.39
COL9A1P20849 HMGB1P27-201ENST00000431429 603 ntBASIC6.36□□□□□ -1.39
COL9A1P20849 CYCSP51-201ENST00000443545 318 ntBASIC6.36□□□□□ -1.39
COL9A1P20849 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL9A1P20849 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC6.36□□□□□ -1.39
COL9A1P20849 SSXP4-201ENST00000451349 245 ntBASIC6.36□□□□□ -1.39
COL9A1P20849 AC079354.2-201ENST00000453523 154 ntBASIC6.36□□□□□ -1.39
COL9A1P20849 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC6.36□□□□□ -1.39
COL9A1P20849 RN7SL326P-201ENST00000477493 296 ntBASIC6.36□□□□□ -1.39
COL9A1P20849 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL9A1P20849 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.36□□□□□ -1.39
COL9A1P20849 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC6.36□□□□□ -1.39
COL9A1P20849 RPL23AP87-202ENST00000573039 466 ntBASIC6.36□□□□□ -1.39
COL9A1P20849 MIR4308-201ENST00000580634 81 ntBASIC6.36□□□□□ -1.39
COL9A1P20849 NF1P5-201ENST00000588287 448 ntBASIC6.36□□□□□ -1.39
COL9A1P20849 SNORD91B-202ENST00000608459 222 ntBASIC6.36□□□□□ -1.39
COL9A1P20849 MIR4275-201ENST00000636486 87 ntBASIC6.36□□□□□ -1.39
COL9A1P20849 CARF-203ENST00000414439 2099 ntTSL 2 BASIC6.36□□□□□ -1.39
COL9A1P20849 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
COL9A1P20849 PROS2P-201ENST00000474651 1951 ntBASIC6.36□□□□□ -1.39
COL9A1P20849 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.36□□□□□ -1.39
COL9A1P20849 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL9A1P20849 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL9A1P20849 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
COL9A1P20849 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL9A1P20849 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
COL9A1P20849 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.36□□□□□ -1.39
COL9A1P20849 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL9A1P20849 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL9A1P20849 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
COL9A1P20849 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.36□□□□□ -1.39
COL9A1P20849 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL9A1P20849 AC123769.2-201ENST00000624332 5984 ntBASIC6.35□□□□□ -1.39
COL9A1P20849 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.35□□□□□ -1.39
COL9A1P20849 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL9A1P20849 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL9A1P20849 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
COL9A1P20849 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
COL9A1P20849 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL9A1P20849 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC6.35□□□□□ -1.39
COL9A1P20849 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC6.35□□□□□ -1.39
COL9A1P20849 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL9A1P20849 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
COL9A1P20849 MIR23B-201ENST00000384832 97 ntBASIC6.35□□□□□ -1.39
COL9A1P20849 SNORA48.7-201ENST00000391302 135 ntBASIC6.35□□□□□ -1.39
COL9A1P20849 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC6.35□□□□□ -1.39
COL9A1P20849 AC063979.1-201ENST00000415539 377 ntBASIC6.35□□□□□ -1.39
COL9A1P20849 TMSB10P2-201ENST00000416049 131 ntBASIC6.35□□□□□ -1.39
COL9A1P20849 AL358453.1-201ENST00000422522 250 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms