Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.8□□□□□ -1.8
LDLRP01130 MTCO3P20-201ENST00000454926 688 ntBASIC3.8□□□□□ -1.8
LDLRP01130 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.8□□□□□ -1.8
LDLRP01130 PLGLA-201ENST00000465668 449 ntBASIC3.8□□□□□ -1.8
LDLRP01130 BZW1P2-201ENST00000473537 826 ntBASIC3.8□□□□□ -1.8
LDLRP01130 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.8□□□□□ -1.8
LDLRP01130 AC004069.2-201ENST00000505438 1114 ntBASIC3.8□□□□□ -1.8
LDLRP01130 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.8□□□□□ -1.8
LDLRP01130 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.8□□□□□ -1.8
LDLRP01130 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.8□□□□□ -1.8
LDLRP01130 SNORA70.14-201ENST00000516205 110 ntBASIC3.8□□□□□ -1.8
LDLRP01130 SNORA74D-201ENST00000516404 141 ntBASIC3.8□□□□□ -1.8
LDLRP01130 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.8□□□□□ -1.8
LDLRP01130 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.8□□□□□ -1.8
LDLRP01130 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.8□□□□□ -1.8
LDLRP01130 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.8□□□□□ -1.8
LDLRP01130 OR4A45P-201ENST00000529954 901 ntBASIC3.8□□□□□ -1.8
LDLRP01130 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.8□□□□□ -1.8
LDLRP01130 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LDLRP01130 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.8□□□□□ -1.8
LDLRP01130 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.8□□□□□ -1.8
LDLRP01130 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.8□□□□□ -1.8
LDLRP01130 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.8□□□□□ -1.8
LDLRP01130 AL133457.1-201ENST00000564251 987 ntBASIC3.8□□□□□ -1.8
LDLRP01130 AC022968.1-201ENST00000567372 442 ntBASIC3.8□□□□□ -1.8
LDLRP01130 AC006270.2-201ENST00000578523 652 ntBASIC3.8□□□□□ -1.8
LDLRP01130 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.8□□□□□ -1.8
LDLRP01130 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.8□□□□□ -1.8
LDLRP01130 AC007566.2-201ENST00000603642 413 ntBASIC3.8□□□□□ -1.8
LDLRP01130 AC010738.1-201ENST00000604970 987 ntBASIC3.8□□□□□ -1.8
LDLRP01130 RNA5SP108-201ENST00000605921 117 ntBASIC3.8□□□□□ -1.8
LDLRP01130 AP000254.1-201ENST00000609934 520 ntBASIC3.8□□□□□ -1.8
LDLRP01130 AC012314.7-201ENST00000619693 93 ntBASIC3.8□□□□□ -1.8
LDLRP01130 AC091931.1-201ENST00000623488 728 ntBASIC3.8□□□□□ -1.8
LDLRP01130 MIR4496-201ENST00000635896 61 ntBASIC3.8□□□□□ -1.8
LDLRP01130 U6.101-201ENST00000637707 76 ntBASIC3.8□□□□□ -1.8
LDLRP01130 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
LDLRP01130 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LDLRP01130 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
LDLRP01130 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.8□□□□□ -1.8
LDLRP01130 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
LDLRP01130 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LDLRP01130 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.79□□□□□ -1.8
LDLRP01130 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LDLRP01130 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.79□□□□□ -1.8
LDLRP01130 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LDLRP01130 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LDLRP01130 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LDLRP01130 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
LDLRP01130 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LDLRP01130 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LDLRP01130 SNORD35B-201ENST00000363660 87 ntBASIC3.79□□□□□ -1.8
LDLRP01130 RNU6-553P-201ENST00000364047 96 ntBASIC3.79□□□□□ -1.8
LDLRP01130 RNU6-253P-201ENST00000384730 105 ntBASIC3.79□□□□□ -1.8
LDLRP01130 RHEBP3-201ENST00000411920 351 ntBASIC3.79□□□□□ -1.8
LDLRP01130 RAB9AP3-201ENST00000412737 573 ntBASIC3.79□□□□□ -1.8
LDLRP01130 AC006366.1-201ENST00000422002 759 ntBASIC3.79□□□□□ -1.8
LDLRP01130 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.79□□□□□ -1.8
LDLRP01130 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.79□□□□□ -1.8
LDLRP01130 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.79□□□□□ -1.8
LDLRP01130 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.79□□□□□ -1.8
LDLRP01130 RAB9AP1-201ENST00000449393 573 ntBASIC3.79□□□□□ -1.8
LDLRP01130 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.79□□□□□ -1.8
LDLRP01130 RPL23AP35-201ENST00000451906 501 ntBASIC3.79□□□□□ -1.8
LDLRP01130 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.79□□□□□ -1.8
LDLRP01130 TRGVB-201ENST00000453257 471 ntBASIC3.79□□□□□ -1.8
LDLRP01130 RPL29P14-201ENST00000495837 428 ntBASIC3.79□□□□□ -1.8
LDLRP01130 AC104685.1-201ENST00000502445 371 ntBASIC3.79□□□□□ -1.8
LDLRP01130 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.79□□□□□ -1.8
LDLRP01130 HIGD1AP3-201ENST00000515857 278 ntBASIC3.79□□□□□ -1.8
LDLRP01130 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.79□□□□□ -1.8
LDLRP01130 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.79□□□□□ -1.8
LDLRP01130 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LDLRP01130 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.79□□□□□ -1.8
LDLRP01130 MTATP6P3-201ENST00000581686 676 ntBASIC3.79□□□□□ -1.8
LDLRP01130 MIR4801-201ENST00000582704 82 ntBASIC3.79□□□□□ -1.8
LDLRP01130 MAGOH2P-202ENST00000584384 429 ntBASIC3.79□□□□□ -1.8
LDLRP01130 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.79□□□□□ -1.8
LDLRP01130 OR4G1P-201ENST00000588632 938 ntBASIC3.79□□□□□ -1.8
LDLRP01130 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.79□□□□□ -1.8
LDLRP01130 RN7SKP299-201ENST00000606679 301 ntBASIC3.79□□□□□ -1.8
LDLRP01130 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.79□□□□□ -1.8
LDLRP01130 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.79□□□□□ -1.8
LDLRP01130 AC019176.2-201ENST00000611579 315 ntBASIC3.79□□□□□ -1.8
LDLRP01130 AL121772.2-201ENST00000614331 297 ntBASIC3.79□□□□□ -1.8
LDLRP01130 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.79□□□□□ -1.8
LDLRP01130 AL392088.2-201ENST00000637607 285 ntBASIC3.79□□□□□ -1.8
LDLRP01130 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
LDLRP01130 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LDLRP01130 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LDLRP01130 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LDLRP01130 FAM91A3P-201ENST00000456826 2544 ntBASIC3.78□□□□□ -1.8
LDLRP01130 AC006504.1-201ENST00000562493 3666 ntBASIC3.78□□□□□ -1.8
LDLRP01130 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
LDLRP01130 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LDLRP01130 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.78□□□□□ -1.8
LDLRP01130 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LDLRP01130 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.78□□□□□ -1.8
LDLRP01130 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.78□□□□□ -1.8
LDLRP01130 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms