Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 AL355480.1-201ENST00000629041 99 ntBASIC3.93□□□□□ -1.78
CGB1A6NKQ9 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.93□□□□□ -1.78
CGB1A6NKQ9 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CGB1A6NKQ9 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC3.93□□□□□ -1.78
CGB1A6NKQ9 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
CGB1A6NKQ9 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CGB1A6NKQ9 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CGB1A6NKQ9 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.93□□□□□ -1.78
CGB1A6NKQ9 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.93□□□□□ -1.78
CGB1A6NKQ9 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CGB1A6NKQ9 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CGB1A6NKQ9 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC3.92□□□□□ -1.78
CGB1A6NKQ9 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CGB1A6NKQ9 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CGB1A6NKQ9 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CGB1A6NKQ9 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CGB1A6NKQ9 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.92□□□□□ -1.78
CGB1A6NKQ9 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
CGB1A6NKQ9 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
CGB1A6NKQ9 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.92□□□□□ -1.78
CGB1A6NKQ9 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC3.92□□□□□ -1.78
CGB1A6NKQ9 RIOK3P1-201ENST00000418778 1528 ntBASIC3.92□□□□□ -1.78
CGB1A6NKQ9 RPL7P26-201ENST00000333817 754 ntBASIC3.92□□□□□ -1.78
CGB1A6NKQ9 Y_RNA.128-201ENST00000363391 112 ntBASIC3.92□□□□□ -1.78
CGB1A6NKQ9 Y_RNA.132-201ENST00000363421 102 ntBASIC3.92□□□□□ -1.78
CGB1A6NKQ9 RNU6-744P-201ENST00000365557 107 ntBASIC3.92□□□□□ -1.78
CGB1A6NKQ9 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CGB1A6NKQ9 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CGB1A6NKQ9 RNU6-1316P-201ENST00000384242 108 ntBASIC3.92□□□□□ -1.78
CGB1A6NKQ9 AL136116.1-201ENST00000403591 381 ntBASIC3.92□□□□□ -1.78
CGB1A6NKQ9 RNU6ATAC21P-201ENST00000408656 126 ntBASIC3.92□□□□□ -1.78
CGB1A6NKQ9 AC078974.1-201ENST00000411597 223 ntBASIC3.92□□□□□ -1.78
CGB1A6NKQ9 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC3.92□□□□□ -1.78
CGB1A6NKQ9 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.92□□□□□ -1.78
CGB1A6NKQ9 AL807761.1-201ENST00000417622 171 ntBASIC3.92□□□□□ -1.78
CGB1A6NKQ9 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.92□□□□□ -1.78
CGB1A6NKQ9 SRIP2-201ENST00000428470 166 ntBASIC3.92□□□□□ -1.78
CGB1A6NKQ9 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.92□□□□□ -1.78
CGB1A6NKQ9 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC3.92□□□□□ -1.78
CGB1A6NKQ9 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC3.92□□□□□ -1.78
CGB1A6NKQ9 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC3.92□□□□□ -1.78
CGB1A6NKQ9 AC000111.2-201ENST00000448200 210 ntBASIC3.92□□□□□ -1.78
CGB1A6NKQ9 NDUFS5P3-201ENST00000450668 321 ntBASIC3.92□□□□□ -1.78
CGB1A6NKQ9 RPS20P32-201ENST00000456044 356 ntBASIC3.92□□□□□ -1.78
CGB1A6NKQ9 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.92□□□□□ -1.78
CGB1A6NKQ9 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
CGB1A6NKQ9 RNU7-63P-201ENST00000459054 62 ntBASIC3.92□□□□□ -1.78
CGB1A6NKQ9 RN7SL517P-201ENST00000462240 305 ntBASIC3.92□□□□□ -1.78
CGB1A6NKQ9 MRPS17P3-201ENST00000465453 385 ntBASIC3.92□□□□□ -1.78
CGB1A6NKQ9 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC3.92□□□□□ -1.78
CGB1A6NKQ9 AC090453.1-201ENST00000495560 436 ntBASIC3.92□□□□□ -1.78
CGB1A6NKQ9 AC023424.1-201ENST00000496058 459 ntBASIC3.92□□□□□ -1.78
CGB1A6NKQ9 AC108145.1-201ENST00000503770 153 ntBASIC3.92□□□□□ -1.78
CGB1A6NKQ9 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.92□□□□□ -1.78
CGB1A6NKQ9 RNA5SP249-201ENST00000516127 99 ntBASIC3.92□□□□□ -1.78
CGB1A6NKQ9 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.92□□□□□ -1.78
CGB1A6NKQ9 OR4R1P-201ENST00000529879 463 ntBASIC3.92□□□□□ -1.78
CGB1A6NKQ9 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC3.92□□□□□ -1.78
CGB1A6NKQ9 BNIP3P1-201ENST00000547295 580 ntBASIC3.92□□□□□ -1.78
CGB1A6NKQ9 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CGB1A6NKQ9 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC3.92□□□□□ -1.78
CGB1A6NKQ9 MIR4489-201ENST00000578869 62 ntBASIC3.92□□□□□ -1.78
CGB1A6NKQ9 MIR3118-1-201ENST00000581787 76 ntBASIC3.92□□□□□ -1.78
CGB1A6NKQ9 AC011447.4-201ENST00000587562 111 ntBASIC3.92□□□□□ -1.78
CGB1A6NKQ9 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
CGB1A6NKQ9 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.92□□□□□ -1.78
CGB1A6NKQ9 BX323046.1-201ENST00000610145 535 ntBASIC3.92□□□□□ -1.78
CGB1A6NKQ9 AC104237.2-201ENST00000612456 443 ntBASIC3.92□□□□□ -1.78
CGB1A6NKQ9 AL049794.2-201ENST00000616301 365 ntBASIC3.92□□□□□ -1.78
CGB1A6NKQ9 AC010205.1-201ENST00000616668 449 ntBASIC3.92□□□□□ -1.78
CGB1A6NKQ9 U73479.1-201ENST00000618062 168 ntBASIC3.92□□□□□ -1.78
CGB1A6NKQ9 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.92□□□□□ -1.78
CGB1A6NKQ9 AC009318.4-201ENST00000620496 486 ntBASIC3.92□□□□□ -1.78
CGB1A6NKQ9 AC090617.10-201ENST00000624308 134 ntBASIC3.92□□□□□ -1.78
CGB1A6NKQ9 AC138305.3-201ENST00000624988 240 ntBASIC3.92□□□□□ -1.78
CGB1A6NKQ9 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.92□□□□□ -1.78
CGB1A6NKQ9 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
CGB1A6NKQ9 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC3.92□□□□□ -1.78
CGB1A6NKQ9 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CGB1A6NKQ9 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CGB1A6NKQ9 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.92□□□□□ -1.78
CGB1A6NKQ9 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CGB1A6NKQ9 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CGB1A6NKQ9 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC3.92□□□□□ -1.78
CGB1A6NKQ9 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CGB1A6NKQ9 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CGB1A6NKQ9 MTND4P35-201ENST00000604257 1375 ntBASIC3.91□□□□□ -1.78
CGB1A6NKQ9 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CGB1A6NKQ9 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
CGB1A6NKQ9 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.91□□□□□ -1.78
CGB1A6NKQ9 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CGB1A6NKQ9 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC3.91□□□□□ -1.78
CGB1A6NKQ9 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC3.91□□□□□ -1.78
CGB1A6NKQ9 SNORA4.3-201ENST00000365564 137 ntBASIC3.91□□□□□ -1.78
CGB1A6NKQ9 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CGB1A6NKQ9 Y_RNA.387-201ENST00000383918 102 ntBASIC3.91□□□□□ -1.78
CGB1A6NKQ9 RNU6-1160P-201ENST00000384546 104 ntBASIC3.91□□□□□ -1.78
CGB1A6NKQ9 SNORA75.4-201ENST00000391278 119 ntBASIC3.91□□□□□ -1.78
CGB1A6NKQ9 RPL32P23-201ENST00000397237 405 ntBASIC3.91□□□□□ -1.78
CGB1A6NKQ9 AL357515.1-201ENST00000402967 542 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms